Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 249,056 (bp)   Positions: 295
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
SS/JrHsdMcwi (2019) 
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
Cers6
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
C
8
T
-
A
G
T
A
A
A
G
A
G
-
C
T
T
G
A
C
-
T
A
T
C
C
A
G
A
T
C
A
T
G
C
A
A
G
T
C
T
C
A
-
T
T
A
4
A
4
C
C
T
T
T
A
A
G
T
G
C
A
C
-
G
T
T
G
3
C
C
C
T
C
T
G
T
A
C
-
G
-
C
G
T
T
G
C
A
5
T
C
A
A
-
C
-
G
G
C
C
C
-
52
4
T
C
G
C
T
C
G
G
-
G
G
G
A
A
-
-
A
A
T
A
T
C
G
C
G
T
T
A
G
C
-
G
C
C
A
C
T
7
13
T
T
T
T
T
-
-
C
G
3
C
C
T
A
T
C
C
T
A
G
A
C
A
A
C
T
G
C
C
A
T
T
G
C
A
C
A
G
G
G
C
A
T
G
T
C
T
T
T
G
A
A
5
C
2
A
T
T
T
T
C
A
C
G
-
G
-
A
C
C
A
T
G
G
C
G
T
-
G
A
G
-
-
C
A
T
28
T
G
A
C
C
T
A
T
C
A
T
C
C
T
G
C
C
C
A
A
T
G
C
G
A
C
C
C
A
A
-
-
G
C
C
18
T
A
T
C
-
T
C
C
C
3
-
A
A
G
A
C
T
C
G
G
2
G
A
T
C
T
A
  53,630,988
  53,632,848
  53,633,197
  53,633,318
  53,634,877
  53,634,969
  53,635,160
  53,635,318
  53,637,077
  53,637,080
  53,637,116
  53,638,026
  53,638,433
  53,640,055
  53,640,104
  53,642,822
  53,643,217
  53,643,218
  53,643,771
  53,645,869
  53,646,037
  53,646,056
  53,646,064
  53,646,084
  53,647,172
  53,649,019
  53,651,564
  53,654,059
  53,655,672
  53,655,959
  53,659,513
  53,659,648
  53,659,933
  53,660,193
  53,661,485
  53,664,203
  53,665,326
  53,666,266
  53,667,151
  53,669,215
  53,669,990
  53,670,010
  53,672,171
  53,674,088
  53,674,364
  53,674,367
  53,674,375
  53,674,705
  53,675,424
  53,679,954
  53,680,284
  53,681,355
  53,681,797
  53,682,798
  53,682,802
  53,682,987
  53,683,362
  53,683,907
  53,685,676
  53,686,575
  53,687,323
  53,688,452
  53,689,603
  53,690,871
  53,691,168
  53,691,254
  53,691,608
  53,691,817
  53,692,039
  53,694,071
  53,694,494
  53,694,685
  53,694,701
  53,695,145
  53,695,601
  53,696,017
  53,696,163
  53,697,818
  53,697,848
  53,698,041
  53,698,105
  53,698,111
  53,698,209
  53,698,291
  53,698,328
  53,698,418
  53,698,468
  53,698,826
  53,698,909
  53,699,081
  53,699,085
  53,699,237
  53,699,259
  53,699,932
  53,699,968
  53,700,067
  53,700,194
  53,700,376
  53,700,786
  53,701,633
  53,701,683
  53,701,805
  53,701,968
  53,702,342
  53,703,038
  53,704,306
  53,704,530
  53,705,008
  53,705,962
  53,705,985
  53,706,014
  53,706,033
  53,706,181
  53,706,873
  53,707,043
  53,707,304
  53,707,529
  53,707,556
  53,707,562
  53,707,677
  53,707,992
  53,708,104
  53,708,528
  53,708,652
  53,708,950
  53,708,974
  53,709,085
  53,709,294
  53,715,033
  53,718,296
  53,718,307
  53,720,168
  53,726,614
  53,726,755
  53,727,677
  53,729,248
  53,729,401
  53,729,998
  53,730,340
  53,730,341
  53,730,706
  53,730,759
  53,733,222
  53,733,225
  53,733,293
  53,733,495
  53,734,265
  53,734,269
  53,734,285
  53,734,291
  53,734,344
  53,734,587
  53,734,711
  53,735,330
  53,735,398
  53,735,427
  53,735,625
  53,735,726
  53,735,851
  53,736,012
  53,736,602
  53,736,660
  53,736,795
  53,737,244
  53,738,249
  53,738,437
  53,738,615
  53,739,162
  53,739,233
  53,740,271
  53,740,363
  53,740,410
  53,740,496
  53,740,775
  53,741,615
  53,741,755
  53,741,847
  53,742,319
  53,742,574
  53,743,263
  53,743,323
  53,743,761
  53,744,301
  53,744,546
  53,744,560
  53,744,572
  53,744,574
  53,744,637
  53,744,720
  53,747,008
  53,747,017
  53,747,023
  53,751,369
  53,752,359
  53,752,804
  53,752,896
  53,759,590
  53,759,919
  53,766,291
  53,766,968
  53,771,927
  53,773,725
  53,774,443
  53,779,154
  53,779,180
  53,779,461
  53,780,373
  53,780,625
  53,781,603
  53,788,140
  53,789,759
  53,792,165
  53,794,117
  53,794,644
  53,794,708
  53,795,940
  53,796,382
  53,796,974
  53,797,644
  53,798,142
  53,800,796
  53,800,808
  53,801,357
  53,802,530
  53,803,907
  53,804,069
  53,804,113
  53,804,196
  53,804,305
  53,804,467
  53,805,159
  53,805,930
  53,806,252
  53,807,402
  53,812,900
  53,813,308
  53,813,806
  53,814,717
  53,814,736
  53,814,847
  53,817,438
  53,817,742
  53,817,754
  53,820,386
  53,820,882
  53,823,279
  53,823,384
  53,823,620
  53,823,695
  53,824,866
  53,825,108
  53,825,181
  53,825,593
  53,825,642
  53,826,591
  53,828,000
  53,828,593
  53,828,648
  53,829,176
  53,829,727
  53,830,674
  53,831,297
  53,835,616
  53,839,493
  53,851,511
  53,856,706
  53,864,669
  53,864,723
  53,864,727
  53,866,468
  53,866,579
  53,867,213
  53,867,218
  53,867,233
  53,867,248
  53,867,252
  53,867,256
  53,867,260
  53,867,312
  53,868,687
  53,870,992
  53,871,296
  53,871,643
  53,871,862
  53,873,085
  53,877,171
  53,877,658
  53,877,953
  53,878,103
  53,878,210
  53,878,222
  53,878,412
  53,879,077
  53,879,393
  53,879,472
C
A
-
C
4
G
A
A
G
G
G
A
T/-
A
-/4
T
C/-
C/-
C
G
T
T
C
G
C
T
T
G
A
C
C
T
T
C
-
T
G
G
A
C
-/T
C
A
G
-/2
A
A/-
G
-
G
-
T
T
T/A
T/A
G
G
G
A
C
A
A
G/-
T
4
A
C
C
A
-
T
T
T
C
T
C
T
C
G
A
A
A
4
T
A
A
-
A
T
A/C
5/-
C
T
T
G
T
T
2
A
A
T
T
T
C
-
-
C
T
A
T
G
T
A
A
4
A
A
A
G
C
18
C
G
-
A
G
G
T
C
-/T
C/-
-/C
C
G
A
T
G
T
A
G
G
T
-
-
-
C
-/C
-/C
C/-
C/-
A
12
T
A
-
T
T
A
G
-
T
A
G
C
A
G
T
T
G
T
C
A/-
A
A
G
G
C
A
T
G
T
G
A
A
A
T
C
C
-
-/C
-/T
-/C
C
C
A
G
G
-
-/G
-
G/-
G
C
G
A
T
G
T
C
23
A
T
T
T
T
-
G
A
A
T
C
A
2
A
C
T
T
G
G
G
G
-
G
A
G
A
T
A
G
C
G
G
C
A
T
C
A
T
T
T
G
T
C
A
T
A
G
T
T
T
C
G
-/A
4
C
T/-
T
-
C/-
-
C
T
3
C
G
G
G
-
4
T
G
T
G
T
C
T
A
A
-
A
G
C
T
A
C