Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 86,513 (bp)   Positions: 148
Genes ( + ) 
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
LH/MavRrrcAek (2020) 
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
Cdon
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
G
A
T
T
G
T
T
9
C
-
G
A
4
G
C
G
C
C
C
C
A
C
10
-
A
G
G
G
A
A
A
T
G
T
T
T
G
A
A
2
T
G
C
G
G
T
G
-
G
G
T
G
4
T
C
T
A
T
G
C
22
A
T
-
A
G
C
T
A
A
G
C
G
T
A
A
-
T
G
G
-
T
T
G
T
T
A
G
31
A
G
T
C
-
C
G
G
T
G
C
G
T
A
G
C
G
C
A
-
A
T
T
T
T
T
C
-
G
-
-
T
T
C
G
A
A
G
-
G
2
C
A
A
A
T
A
C
C
C
C
C
C
A
T
C
G
T
  33,784,013
  33,784,664
  33,785,173
  33,786,550
  33,787,093
  33,788,651
  33,790,822
  33,791,202
  33,791,450
  33,791,567
  33,793,079
  33,793,132
  33,793,134
  33,794,315
  33,794,429
  33,794,621
  33,794,674
  33,794,747
  33,795,369
  33,796,169
  33,797,079
  33,797,155
  33,797,874
  33,798,186
  33,798,538
  33,798,672
  33,799,095
  33,799,476
  33,800,440
  33,801,016
  33,801,944
  33,802,497
  33,802,722
  33,802,887
  33,803,389
  33,803,393
  33,803,395
  33,804,002
  33,804,021
  33,804,904
  33,804,908
  33,805,301
  33,805,507
  33,805,869
  33,806,175
  33,806,355
  33,806,408
  33,806,551
  33,806,661
  33,807,467
  33,807,856
  33,807,974
  33,808,071
  33,808,604
  33,809,159
  33,809,475
  33,809,895
  33,810,030
  33,811,251
  33,811,984
  33,812,436
  33,812,760
  33,813,232
  33,814,526
  33,815,662
  33,815,846
  33,816,437
  33,816,625
  33,817,240
  33,817,394
  33,818,051
  33,818,804
  33,820,980
  33,821,157
  33,821,307
  33,821,520
  33,821,525
  33,821,529
  33,822,067
  33,824,011
  33,824,341
  33,824,617
  33,824,625
  33,825,762
  33,826,581
  33,826,686
  33,827,333
  33,827,379
  33,827,445
  33,828,219
  33,828,246
  33,828,665
  33,830,169
  33,830,729
  33,832,285
  33,832,731
  33,833,296
  33,833,300
  33,835,041
  33,835,764
  33,835,921
  33,836,370
  33,836,629
  33,837,704
  33,837,798
  33,838,911
  33,839,129
  33,840,020
  33,841,778
  33,843,188
  33,844,122
  33,844,244
  33,844,459
  33,845,469
  33,845,473
  33,845,705
  33,846,750
  33,847,584
  33,848,094
  33,848,551
  33,849,211
  33,849,918
  33,850,384
  33,851,172
  33,851,646
  33,852,005
  33,852,006
  33,852,208
  33,852,755
  33,852,769
  33,853,125
  33,853,126
  33,853,135
  33,853,137
  33,853,139
  33,854,335
  33,854,928
  33,856,567
  33,856,773
  33,856,775
  33,856,779
  33,856,780
  33,856,781
  33,857,821
  33,857,903
  33,858,974
  33,860,795
  33,861,387
C
A
T
G
C
A
A
C
-
T
8
C
G
-
A
G
A
T
A
T
T
C
T
-
-/6
G
T
A
A
C
C
C
C
A
-/C
C/-
-/C
A
G
-
-
C
A
T
A
C
C
-
T
A
A
C
A
-
C
G
C
G
C
A
T
-
G
A
T
C
T
T
C
G
C
A
T
T
C
T
G
T
A
A
A
G
C
C
A
C
C
T
A
-
G/-
A
A
T
A
T
-/C
-/C
-
A
T
A
C
G
A
T
A
T
G
4
T
C
G
C
C
C
T
2
A
3
9
C
-
T
T
G
C
A
2
A
-
T/-
-/G
-/G
-/G
C
G
G
-/T
-/T
T/-
-/T
-/T
G
C
T
A
G