Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly mRatBN7.2
   

Chromosome Start Position Stop Position
Region Size: 158,679 (bp)   Positions: 258
Genes ( + ) 
Genes ( - ) 
mRatBN7.2  
SHR/OlalpcvMcwi (2019) 
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
Ankrd11
G
C
G
T
T
G
4
A
A
A
T
G
C
G
4
G
G
T
A
4
6
C
A
C
T
G
T
C
11
4
A
T
C
A
G
6
C
A
T
T
4
T
-
A
G
T
T
A
-
G
4
A
-
G
A
A
C
G
-
-
-
G
G
G
G
C
-
T
T
-
T
C
T
13
T
T
T
T
C
-
-
G
T
A
G
T
C
T
T
T
G
T
G
G
C
G
-
C
T
T
A
-
-
C
A
-
G
G
G
G
T
A
-
G
C
T
G
C
A
C
T
C
C
G
G
C
G
C
C
A
A
-
C
G
G
20
G
G
A
3
A
-
3
C
A
G
-
T
G
-
A
T
T
A
A
A
A
A
C
A
G
T
-
G
G
A
4
C
G
C
-
A
C
6
G
A
T
-
4
A
-
T
G
A
T
G
A
A
C
C
T
G
A
T
A
A
A
A
C
A
G
G
-
A
G
G
T
-
G
G
G
C
4
2
C
6
2
C
G
C
T
C
C
G
G
C
A
G
A
T
C
2
4
A
-
T
G
C
C
A
3
A
T
A
-
G
T
T
A
A
G
T
G
G
G
4
C
2
  50,941,486
  50,946,356
  50,947,229
  50,950,679
  50,953,111
  50,953,238
  50,954,822
  50,955,020
  50,955,022
  50,955,037
  50,956,068
  50,956,254
  50,956,469
  50,957,909
  50,958,068
  50,958,337
  50,959,432
  50,960,756
  50,960,832
  50,961,232
  50,961,238
  50,963,114
  50,964,366
  50,964,533
  50,965,137
  50,965,874
  50,966,398
  50,966,957
  50,967,250
  50,967,263
  50,968,286
  50,968,416
  50,968,521
  50,970,367
  50,970,871
  50,971,474
  50,972,867
  50,973,002
  50,973,157
  50,973,852
  50,974,717
  50,974,761
  50,975,083
  50,976,106
  50,976,672
  50,977,617
  50,978,002
  50,978,684
  50,979,598
  50,980,546
  50,981,015
  50,981,043
  50,981,183
  50,981,268
  50,981,711
  50,981,845
  50,982,938
  50,983,317
  50,984,377
  50,985,184
  50,985,215
  50,985,384
  50,985,446
  50,985,547
  50,985,684
  50,985,856
  50,987,128
  50,987,198
  50,987,200
  50,987,641
  50,988,053
  50,988,251
  50,988,360
  50,988,569
  50,988,633
  50,988,909
  50,989,520
  50,989,651
  50,989,944
  50,990,269
  50,990,271
  50,990,274
  50,990,275
  50,990,601
  50,991,380
  50,991,407
  50,991,682
  50,993,688
  50,993,797
  50,993,806
  50,995,615
  50,996,779
  50,996,780
  50,996,857
  50,997,151
  50,998,610
  50,999,081
  50,999,298
  51,000,348
  51,000,974
  51,001,177
  51,001,383
  51,002,270
  51,002,376
  51,002,684
  51,004,377
  51,005,378
  51,005,889
  51,006,125
  51,006,649
  51,007,627
  51,007,671
  51,009,446
  51,009,871
  51,010,754
  51,010,766
  51,011,021
  51,012,650
  51,014,615
  51,016,310
  51,016,311
  51,016,325
  51,016,365
  51,016,994
  51,017,121
  51,017,139
  51,017,503
  51,017,906
  51,018,099
  51,019,198
  51,021,184
  51,021,648
  51,022,464
  51,023,414
  51,023,836
  51,024,034
  51,024,053
  51,024,070
  51,024,167
  51,024,170
  51,024,184
  51,024,211
  51,024,580
  51,025,968
  51,028,561
  51,030,222
  51,030,522
  51,031,686
  51,031,765
  51,032,783
  51,033,671
  51,033,956
  51,034,465
  51,036,854
  51,036,856
  51,037,348
  51,037,351
  51,039,012
  51,039,172
  51,039,733
  51,039,968
  51,041,071
  51,041,699
  51,042,173
  51,042,447
  51,043,065
  51,043,142
  51,044,078
  51,044,565
  51,045,390
  51,047,066
  51,047,258
  51,047,885
  51,047,888
  51,048,595
  51,048,633
  51,048,722
  51,048,822
  51,050,504
  51,052,481
  51,052,507
  51,052,698
  51,053,097
  51,054,101
  51,054,526
  51,054,602
  51,055,025
  51,055,123
  51,056,322
  51,056,652
  51,056,896
  51,057,436
  51,057,514
  51,058,025
  51,058,914
  51,058,937
  51,059,380
  51,059,535
  51,062,517
  51,063,032
  51,063,046
  51,063,049
  51,063,102
  51,063,267
  51,063,928
  51,066,315
  51,067,498
  51,067,675
  51,068,962
  51,069,930
  51,069,932
  51,071,540
  51,075,324
  51,075,354
  51,075,359
  51,075,362
  51,075,569
  51,075,593
  51,076,466
  51,076,571
  51,076,910
  51,077,324
  51,078,343
  51,080,599
  51,080,900
  51,080,927
  51,081,220
  51,081,259
  51,081,371
  51,081,509
  51,081,903
  51,082,507
  51,082,567
  51,082,827
  51,083,166
  51,083,295
  51,084,589
  51,087,442
  51,087,824
  51,089,320
  51,089,324
  51,089,326
  51,089,470
  51,089,606
  51,089,767
  51,090,834
  51,091,736
  51,092,069
  51,092,075
  51,092,136
  51,092,933
  51,094,530
  51,095,023
  51,097,099
  51,097,107
  51,097,831
  51,097,839
  51,097,846
A
T
A
C
G
A
-
C/-
C/-
C
C
A
A
A
-
A
A
C
T
-
-
T
C
T
G
A
C
T
-
-
G
C
T
G
A
-
G
T
C
C
-
C
2
G
C
C
C
T
10
A
-
G
34
T
G
T
T
A
4
T
35
T
A
A
A
A
T
A
A
A
G
T
A
-
C
C
C
G
-
3
5
T
A
G
A
A
T
G
-
A
A
C
A
A
T
C
9
A
-
-/C
C
A
4
T
G
A
A
T
T
A
-/A
T
4
C
T
C
A
T
T
T
A
T
T
A
A
T
T
A
A
T
G
4
T
A
-/T
-
-/A
C
-
-
G
G
-
A
G
A
3
C
A
20
G
C
C
T
C
-/G
-/G
-
T
C
A
-
4
A
A
G
-
T
A
G/-
10
-
T
-
-
C
C
A
-
G
2
G
A
G
C
A
-
T
T
T
C
A
G
C
T
C
G
T
T
-
-/A
A/-
-/2
?
A
A
-
4
C
C/-
-/C
T
-
-
G
-
-
A
A
G
C
T
T
A
A
T
G
A
G
G
T
-
-
G
16
C
A
G
-
-
-
G/-
C
T
2
-/T
A
T/C
A/G
G
C
C
T
T/-
A/-
4/-
C/T
-