Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 135,246 (bp)   Positions: 183
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
LN/MavRrrc (RGD) 
.001
.002
.016
.019
.2
.0
.095
.002
.035
.003
.095
.046
.23
.008
.507
.259
.002
.162
.128
.715
.324
.071
.088
.032
.277
.05
.005
.034
.068
.448
.057
.015
.524
.008
--
--
.142
.003
.002
.031
.099
.006
.013
.044
.009
.003
.075
.025
.187
.566
.526
.033
.001
.001
.328
.384
--
.533
.264
.27
.042
.151
.462
.462
.009
.008
.004
.002
.002
.001
.09
.0
.0
.0
.076
.467
.752
.002
.001
.0
.0
1.0
.009
.004
.003
.022
.001
.0
.0
.043
.01
.0
.011
.042
.315
.009
.001
.161
.015
.135
.978
.295
.0
.017
.002
.007
.141
.135
.019
.021
.002
.2
.002
.0
.0
.0
.001
.001
.364
.001
.0
.0
.005
.002
.104
.0
.001
.076
.001
--
--
--
--
--
--
.494
.155
.143
.0
.003
.0
.0
.002
.0
.243
.213
.0
.01
.0
.0
.006
.01
.618
.0
.003
.002
.0
.006
.0
.088
.0
.0
.001
.0
.0
.005
1.0
.0
.007
.0
.418
.032
.098
.001
.0
.0
.006
.161
.001
.001
.001
.049
.865
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
Wrn
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
T
G
G
C
G
G
A
G
A
C
C
T
T
C
T
C
G
G
A
G
T
T
G
C
T
A
C
C
A
T
A
T
T
T
T
T
T
C
A
C
C
A
G
A
C
A
C
T
C
T
A
C
G
T
T
G
G
C
A
C
T
C
T
T
C
T
G
G
T
C
T
C
A
T
A
G
T
T
T
A
C
G
A
G
T
T
A
C
A
T
T
C
T
T
A
T
G
A
G
A
T
T
C
G
G
C
A
C
G
T
C
T
A
C
C
A
G
C
A
G
C
G
G
C
G
C
G
A
G
A
G
T
T
G
A
T
G
G
G
C
T
T
C
T
G
C
A
T
G
A
C
C
T
G
A
T
C
A
C
C
T
T
G
A
C
C
T
C
A
A
G
A
C
T
T
T
T
A
T
C
C
T
  62,484,216
  62,484,705
  62,489,528
  62,489,760
  62,490,533
  62,490,573
  62,491,163
  62,491,187
  62,491,708
  62,491,781
  62,492,095
  62,492,360
  62,492,574
  62,493,965
  62,495,947
  62,496,023
  62,496,297
  62,497,456
  62,497,745
  62,498,107
  62,498,174
  62,500,512
  62,500,772
  62,502,222
  62,503,454
  62,504,445
  62,504,864
  62,504,952
  62,505,119
  62,507,101
  62,507,569
  62,507,651
  62,507,832
  62,508,450
  62,511,809
  62,515,202
  62,518,839
  62,519,020
  62,519,354
  62,519,361
  62,519,457
  62,519,568
  62,520,420
  62,520,426
  62,520,656
  62,520,885
  62,521,326
  62,521,348
  62,521,382
  62,521,487
  62,521,510
  62,526,191
  62,527,361
  62,527,709
  62,529,244
  62,531,284
  62,533,885
  62,534,481
  62,534,658
  62,534,659
  62,534,701
  62,534,803
  62,534,834
  62,534,835
  62,535,030
  62,535,829
  62,535,831
  62,536,099
  62,536,639
  62,536,893
  62,538,415
  62,538,724
  62,539,023
  62,539,027
  62,539,146
  62,539,161
  62,539,221
  62,540,731
  62,540,859
  62,540,958
  62,542,951
  62,543,372
  62,543,890
  62,543,901
  62,544,050
  62,544,111
  62,544,223
  62,544,466
  62,544,620
  62,544,853
  62,544,902
  62,544,967
  62,546,788
  62,548,544
  62,549,785
  62,550,132
  62,550,619
  62,550,813
  62,550,825
  62,551,014
  62,551,251
  62,551,638
  62,551,818
  62,552,104
  62,552,186
  62,552,226
  62,552,358
  62,552,654
  62,552,768
  62,553,234
  62,553,362
  62,553,620
  62,553,990
  62,554,079
  62,554,100
  62,554,948
  62,555,046
  62,555,514
  62,555,776
  62,555,816
  62,556,069
  62,556,127
  62,556,307
  62,556,314
  62,556,580
  62,556,620
  62,556,899
  62,557,001
  62,557,089
  62,557,959
  62,557,992
  62,558,198
  62,558,315
  62,558,372
  62,558,433
  62,558,727
  62,558,739
  62,558,771
  62,558,823
  62,558,905
  62,558,948
  62,558,949
  62,558,977
  62,559,089
  62,559,186
  62,559,187
  62,559,274
  62,559,536
  62,559,654
  62,559,993
  62,559,996
  62,559,997
  62,560,049
  62,560,183
  62,560,214
  62,560,242
  62,560,306
  62,560,336
  62,560,426
  62,560,498
  62,560,538
  62,560,552
  62,560,554
  62,560,594
  62,560,662
  62,560,669
  62,560,825
  62,561,001
  62,561,339
  62,561,343
  62,563,752
  62,564,005
  62,565,229
  62,565,296
  62,565,355
  62,566,455
  62,566,643
  62,568,103
  62,568,171
  62,568,207
  62,568,721
  62,574,065
  62,574,088
G
C
A
A
T
A
C
G
C
G
T
T
C
C
T
C
T
A
T
T
A
C
C
A
G
C
G
A
A
C
C
G
C
A
C
A
C
C
T
G
T
A
T
A
G
T
G
T
C
A
C
C
T
A
A
C
A
T
T
T
A
G
T
G
C
T
C
A
T
G
T
A
G
C
C
G
C
C
C
C
G
T
A
G
A
C
A
T
A
G
C
C
T
G
C
C
G
A
G
A
G
C
C
T
T
A
A
G
T
A
A
T
C
G
G
T
G
C
A
G
T
G
A
A
T
A
T
C
T
A
G
A
C
C
C
C
C
A
T
A
G
C
G
A
C
C
G
G
C
A
G
T
T
C
A
G
C
T
G
T
T
C
A
T
C
T
T
C
T
G
G
C
C
T
C
C
G
C
G
C
G
T
C