Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 108,764 (bp)   Positions: 151
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
HXB20/IpcvMcwi (2020) 
.043
.011
.0
.006
.001
.001
.0
.0
.001
.02
.012
.007
.0
.0
.0
.001
.0
.0
.001
.001
.0
.001
.631
.012
.003
.0
.013
.0
.002
.0
.002
.007
.002
.002
.034
.004
.0
.023
.001
.001
.0
.012
.003
.008
.338
.001
.007
--
--
.003
.06
.111
.014
.001
.118
.189
.01
.272
.367
.939
--
--
--
.092
.057
.044
.035
.002
.0
.0
.015
.011
.078
.036
.036
.003
.02
.0
.023
.056
.002
.0
.718
.005
.068
.007
.023
.016
.001
--
--
--
--
--
.05
.0
.0
.0
.0
.043
.022
.002
.001
.001
.001
.0
.0
.0
.0
.001
.017
.001
.0
.0
.0
.0
.336
.0
.0
.001
.01
.0
.0
.003
.0
.104
.01
.0
.456
.0
.001
.0
.0
.0
.483
.001
.022
.002
.128
.385
.0
.0
.002
.001
.001
.117
.01
.0
.0
.007
.0
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
Wnk2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
C
C
A
A
G
A
T
C
C
T
A
C
A
G
C
T
46
T
A
G
G
A
C
C
T
2
T
G
T
C
G
C
G
2
-
G
A
G
C
C
A
G
A
T
T
G
T
C
A
G
C
T
C
G
C
T
-
G
G
A
G
A
T
T
G
-
C
G
C
T
C
-
C
C
T
C
T
-
G
-
G
G
T
-
A
A
A
A
T
A
C
T
C
A
T
G
A
G
C
A
A
A
T
A
A
G
G
G
-
C
-
C
-
-
-
G
A
-
-
A
T
C
-
G
G
-
A
G
T
G
G
T
C
C
A
A
A
G
A
C
-
C
A
A
-
-
A
C
A
-
  15,924,558
  15,925,109
  15,927,001
  15,927,181
  15,927,505
  15,927,818
  15,927,882
  15,928,030
  15,928,413
  15,928,439
  15,928,589
  15,928,943
  15,929,433
  15,929,703
  15,929,875
  15,930,536
  15,930,995
  15,931,355
  15,931,433
  15,931,567
  15,931,670
  15,932,015
  15,932,870
  15,933,419
  15,934,025
  15,934,310
  15,934,808
  15,935,943
  15,936,153
  15,936,495
  15,936,564
  15,936,570
  15,936,580
  15,937,230
  15,937,543
  15,938,491
  15,938,953
  15,939,422
  15,940,354
  15,940,655
  15,941,681
  15,941,776
  15,942,040
  15,942,044
  15,942,359
  15,942,450
  15,942,981
  15,943,930
  15,943,954
  15,943,990
  15,944,318
  15,944,540
  15,944,681
  15,944,689
  15,945,370
  15,945,393
  15,946,123
  15,946,414
  15,946,738
  15,946,780
  15,947,160
  15,947,201
  15,947,306
  15,947,448
  15,947,512
  15,947,513
  15,947,859
  15,948,053
  15,948,440
  15,948,584
  15,949,243
  15,949,245
  15,950,316
  15,952,974
  15,953,286
  15,955,160
  15,957,079
  15,957,803
  15,958,181
  15,958,437
  15,958,630
  15,959,498
  15,959,763
  15,960,738
  15,961,653
  15,961,727
  15,962,282
  15,962,307
  15,963,047
  15,963,510
  15,964,028
  15,964,043
  15,964,072
  15,965,079
  15,965,646
  15,966,156
  15,968,135
  15,968,288
  15,968,543
  15,968,917
  15,969,163
  15,969,777
  15,970,659
  15,970,749
  15,970,908
  15,971,029
  15,973,191
  15,974,968
  15,974,970
  15,974,978
  15,974,993
  15,975,009
  15,975,041
  15,975,058
  15,975,068
  15,975,073
  15,975,122
  15,975,160
  15,975,163
  15,975,167
  15,975,359
  15,975,556
  15,976,203
  15,978,465
  15,978,489
  15,979,090
  15,979,946
  15,981,079
  15,981,207
  15,988,780
  15,990,676
  15,991,761
  15,993,494
  15,994,428
  15,994,435
  15,995,348
  16,001,039
  16,001,286
  16,001,513
  16,005,608
  16,012,700
  16,019,126
  16,019,292
  16,021,423
  16,022,946
  16,026,709
  16,026,717
  16,026,774
  16,026,775
  16,027,423
  16,030,545
C
T
T
G
G
C
G
C
T
T
G
G
T
G
A
T
A
-
C
G
A
A
T
T
T
C
2/-
C
T
C
T
A
T
T
-
C
A
G
T
T
T
G
-
C
C
C
A
C
T
G
A
T
C
T
A
T
C
T
A
T
G
G/T
T
-
C
A
C
T
A
G
C
T
2
T
T
C
T
C
G
A
3
A
A
A
-/6
C
G
C
T
-
A/G
C/A
T/G
T
G
C
A
C
A
A
T
G
-
C
G
G
A
A
A
G
-
2
-
2
A
C
-
-
C
C
G
C
T
3
A
G/C
T
G
A
G
-
A
A
T
T
C
G
G
A
G
T
A
A
G
C
T
A
T
A
G
8