Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 144,002 (bp)   Positions: 262
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
WKY/NCrl (RGD) 
.003
.002
.066
.001
.006
.001
.002
.0
.004
.0
.001
.01
.533
.754
.0
.001
.042
.05
.0
1.0
.02
.007
.003
.0
.0
.0
.002
.045
.101
.994
.982
.597
.943
.027
.0
.0
1.0
1.0
.022
.0
.001
.0
.017
.003
.013
.0
.007
.001
.003
.914
.017
.001
.642
.013
.002
.446
.002
.001
.01
.017
.001
.795
.444
.116
.28
.052
.246
.022
.018
.554
.025
.432
.078
.036
.146
.418
.202
.352
.069
.059
.005
.008
.242
.012
.082
--
--
--
--
--
--
--
--
--
--
--
--
.028
.016
.066
--
.094
.011
.002
.001
.076
.099
.026
.025
.032
.045
.007
.007
.004
.034
.089
.034
.013
.0
.0
.0
.002
.0
.001
.0
.006
.015
.248
.097
.142
.005
.012
.006
.003
.004
.018
.014
.016
.027
.034
.02
.006
.008
.003
.029
.011
.029
.01
.054
.021
.04
.007
.007
.017
.014
.021
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.002
.009
.083
.001
.004
.771
.054
.211
--
.089
.001
.011
.0
.005
.775
.414
.001
.005
.0
.005
--
--
--
--
--
--
--
--
--
--
--
--
.566
.102
.077
.0
.004
--
.107
.014
.35
.055
.128
--
--
.015
.039
.058
.001
.001
.023
.0
.015
.0
.004
.037
.0
.002
.0
.207
.969
.018
.002
.0
1.0
.954
.983
.002
.019
.001
.002
.02
.001
.012
.008
.001
.153
.006
.006
.004
.042
.0
.001
.999
.0
.001
.002
.223
.002
.002
.002
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
Vrk2
C
T
C
T
A
A
T
C
G
T
C
T
C
A
G
T
G
G
A
G
A
G
C
A
G
C
A
C
A
T
C
G
G
C
A
C
G
C
T
G
C
C
C
T
C
T
T
G
T
A
A
T
G
C
C
A
A
G
T
C
A
T
G
C
A
C
C
A
G
G
C
T
C
A
A
T
T
C
A
G
C
G
A
C
A
C
T
C
G
T
A
A
G
G
A
A
T
G
G
G
C
A
T
C
G
T
G
G
G
G
C
C
C
T
G
G
T
G
C
A
T
C
C
G
T
C
T
A
C
T
T
G
G
G
C
G
A
A
C
T
A
T
T
G
G
C
G
C
C
T
C
G
A
G
A
C
G
T
G
G
T
T
T
A
G
A
A
G
C
C
A
G
G
T
A
T
A
A
A
A
G
T
G
C
G
G
G
G
C
G
G
C
G
G
C
A
T
T
T
T
A
C
G
G
G
G
T
T
C
T
C
A
C
G
T
G
G
T
T
T
G
T
A
C
C
C
G
G
C
A
G
A
G
C
C
T
C
C
C
G
C
A
T
A
T
A
G
T
T
C
G
C
A
C
G
A
G
T
A
G
A
G
  110,741,669
  110,742,153
  110,742,323
  110,743,297
  110,743,781
  110,743,838
  110,744,106
  110,745,478
  110,745,991
  110,748,481
  110,748,495
  110,748,790
  110,748,950
  110,748,953
  110,749,232
  110,749,400
  110,749,771
  110,749,775
  110,751,052
  110,751,489
  110,753,235
  110,753,790
  110,754,928
  110,755,419
  110,755,492
  110,756,447
  110,756,586
  110,756,929
  110,757,128
  110,757,968
  110,757,983
  110,758,058
  110,758,158
  110,758,499
  110,758,626
  110,758,639
  110,759,290
  110,759,346
  110,759,590
  110,760,183
  110,760,973
  110,761,667
  110,761,716
  110,762,164
  110,763,772
  110,765,383
  110,765,810
  110,766,973
  110,767,167
  110,767,206
  110,767,612
  110,768,913
  110,769,067
  110,770,722
  110,770,827
  110,770,914
  110,772,150
  110,772,290
  110,772,364
  110,772,780
  110,773,143
  110,773,307
  110,773,959
  110,774,073
  110,774,116
  110,774,507
  110,774,756
  110,774,796
  110,774,822
  110,774,941
  110,775,178
  110,775,514
  110,775,562
  110,775,576
  110,775,814
  110,775,850
  110,776,440
  110,776,584
  110,776,611
  110,776,918
  110,776,993
  110,776,997
  110,777,195
  110,777,573
  110,777,832
  110,778,781
  110,779,236
  110,779,798
  110,780,095
  110,780,576
  110,781,075
  110,781,177
  110,781,381
  110,781,496
  110,781,580
  110,781,871
  110,782,218
  110,783,129
  110,783,756
  110,784,011
  110,785,332
  110,785,569
  110,785,654
  110,785,967
  110,786,007
  110,786,020
  110,786,027
  110,786,977
  110,787,224
  110,787,567
  110,787,831
  110,787,846
  110,787,847
  110,787,929
  110,788,275
  110,789,142
  110,789,883
  110,789,939
  110,789,951
  110,789,956
  110,789,970
  110,789,983
  110,789,992
  110,790,005
  110,790,320
  110,791,438
  110,791,547
  110,791,789
  110,792,269
  110,792,597
  110,792,756
  110,792,783
  110,792,850
  110,792,856
  110,792,861
  110,792,873
  110,792,875
  110,792,876
  110,792,887
  110,792,889
  110,792,915
  110,792,998
  110,792,999
  110,793,012
  110,793,719
  110,794,713
  110,794,943
  110,795,014
  110,795,131
  110,795,412
  110,795,415
  110,795,980
  110,795,998
  110,796,198
  110,796,230
  110,796,306
  110,797,734
  110,797,861
  110,798,369
  110,798,491
  110,798,678
  110,798,702
  110,798,899
  110,799,135
  110,799,146
  110,799,293
  110,799,468
  110,799,928
  110,800,021
  110,800,081
  110,800,145
  110,801,219
  110,801,394
  110,801,680
  110,801,855
  110,802,008
  110,802,416
  110,802,761
  110,802,893
  110,804,014
  110,804,918
  110,805,084
  110,805,679
  110,805,862
  110,806,340
  110,807,165
  110,807,466
  110,808,328
  110,808,892
  110,809,070
  110,809,873
  110,810,774
  110,810,980
  110,811,270
  110,816,670
  110,816,830
  110,817,796
  110,818,719
  110,820,074
  110,820,352
  110,821,221
  110,821,336
  110,821,379
  110,822,157
  110,822,403
  110,826,223
  110,827,309
  110,828,725
  110,829,587
  110,830,607
  110,860,430
  110,860,664
  110,862,281
  110,863,363
  110,864,260
  110,864,555
  110,865,316
  110,866,453
  110,866,454
  110,866,942
  110,866,948
  110,867,073
  110,867,087
  110,867,123
  110,868,116
  110,868,287
  110,868,318
  110,868,498
  110,869,974
  110,871,141
  110,871,297
  110,871,362
  110,871,966
  110,872,051
  110,872,409
  110,872,761
  110,873,462
  110,874,539
  110,875,181
  110,875,282
  110,876,114
  110,877,825
  110,878,316
  110,878,507
  110,878,516
  110,878,587
  110,878,608
  110,878,656
  110,878,669
  110,878,993
  110,879,085
  110,879,162
  110,879,531
  110,879,880
  110,880,341
  110,881,032
  110,881,089
  110,882,660
  110,882,897
  110,883,575
  110,883,710
  110,883,743
T
C
T
C
G
C
G
T
T
C
T
C
A
C
A
C
A
A
G
A
C
C
T
G
A
A
G
T
G
C
T
A
A
A
G
A
A
T
A
A
T
T
A
C
T
C
A
A
C
G
G
G
A
T
T
C
C
A
A
T
G
A
A
T
C
T
T
G
C
T
T
C
A
G
C
C
G
G
C
A
T
A
G
T
C
T
C
G
A
C
G
C
A
T
G
G
C
A
A
T
A
C
C
T
T
C
C
T
A
A
T
A
G
C
A
T
C
T
T
C
A
A
T
T
C
G
A
G
A
C
G
C
T
C
T
C
T
T
T
C
C
C
C
A
A
T
T
A
T
C
T
T
T
A
G
T
T
A
A
C
C
A
C
G
A
G
G
A
G
A
G
T
C
C
G
C
C
G
G
G
G/T
C
A
A
C
A
A
A
A
A
A
T
A
A
T
G
G
C
C
C
G
T
A
A
T
T
C
C
G
C
A
G
T
A
C
A
A
A
A
C
A
C
T
T
G
A
A
T
A
G
A
G
A
T
T
C
T
T
T
T
T
T
C
G
C
C
A
C
C
T
A
T
G
A
A
G
A
C
G
A
G
A