Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 166,880 (bp)   Positions: 139
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SHR/NHsd (RGD) 
.0
.0
.0
.002
.001
.006
.0
.0
.003
.003
.073
.017
.003
.023
.001
.002
.0
.0
.003
.003
.034
.356
.0
.001
--
.01
--
.016
.055
.009
.017
--
.007
.036
.054
.632
.028
.02
.0
.053
.0
.0
.0
.038
.001
.001
1.0
.0
.001
.0
.019
.011
--
.0
.173
.761
--
.001
.0
.1
.216
.02
.0
.006
.987
1.0
.956
.005
.004
--
--
--
--
--
--
--
.023
.0
.001
.0
.013
.001
.011
.226
.0
.001
.01
.002
.002
.0
.017
--
--
.0
.0
.002
.0
.0
.018
.001
.01
.544
.105
.002
.0
.004
.006
.004
.0
.0
.57
.999
.035
.941
.001
.0
.212
.002
.0
.0
.009
.0
.05
.011
--
--
.083
.001
.211
.001
.048
.001
.003
.122
.022
.001
.004
.0
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Vps41
Vps41
Vps41
Vps41
Vps41
Vps41
Vps41
Vps41
Vps41
Vps41
Vps41
Vps41
Vps41
Vps41
C
G
G
C
C
T
G
T
T
G
T
G
C
T
T
T
A
C
G
G
G
C
T
T
C
C
G
A
A
G
T
G
A
C
A
G
T
T
G
T
G
G
G
G
T
T
T
T
A
T
C
T
G
T
G
C
T
C
A
A
C
C
T
T
A
T
A
C
T
G
G
T
C
C
T
G
G
C
C
T
A
A
C
T
A
C
C
T
C
C
G
A
C
T
T
A
C
T
G
A
G
T
G
C
G
G
A
G
G
G
A
A
C
G
G
G
A
C
T
C
A
C
C
G
C
A
A
G
C
G
A
C
A
A
G
A
C
G
G
  48,645,967
  48,645,968
  48,646,051
  48,646,078
  48,646,079
  48,646,165
  48,646,283
  48,646,796
  48,646,835
  48,646,836
  48,647,106
  48,647,130
  48,647,164
  48,651,411
  48,653,061
  48,654,619
  48,654,717
  48,654,854
  48,658,585
  48,658,613
  48,659,280
  48,659,685
  48,660,378
  48,660,756
  48,663,678
  48,668,564
  48,673,581
  48,678,852
  48,690,422
  48,698,542
  48,699,726
  48,702,161
  48,706,104
  48,706,577
  48,706,824
  48,706,956
  48,706,994
  48,707,016
  48,707,122
  48,707,146
  48,708,804
  48,709,517
  48,709,986
  48,711,013
  48,712,400
  48,712,409
  48,712,932
  48,713,932
  48,722,841
  48,722,928
  48,724,535
  48,726,325
  48,727,338
  48,730,839
  48,732,437
  48,732,446
  48,733,636
  48,734,466
  48,734,472
  48,734,653
  48,734,780
  48,735,920
  48,737,993
  48,737,996
  48,738,953
  48,740,617
  48,741,075
  48,741,923
  48,742,848
  48,745,065
  48,745,073
  48,749,997
  48,750,136
  48,750,343
  48,750,402
  48,750,734
  48,753,046
  48,753,667
  48,755,050
  48,755,973
  48,756,172
  48,757,998
  48,758,488
  48,759,209
  48,759,619
  48,761,174
  48,761,440
  48,763,168
  48,763,869
  48,766,419
  48,767,428
  48,768,769
  48,769,939
  48,773,555
  48,773,567
  48,774,398
  48,774,518
  48,774,952
  48,777,781
  48,777,965
  48,778,307
  48,778,960
  48,779,512
  48,779,888
  48,780,060
  48,781,952
  48,781,953
  48,782,655
  48,782,791
  48,783,229
  48,783,776
  48,784,546
  48,785,305
  48,786,015
  48,786,442
  48,789,081
  48,789,665
  48,791,572
  48,791,756
  48,792,090
  48,793,465
  48,794,527
  48,796,882
  48,796,934
  48,799,164
  48,799,165
  48,800,322
  48,801,211
  48,801,844
  48,801,871
  48,806,150
  48,806,435
  48,806,696
  48,806,954
  48,807,727
  48,808,375
  48,808,574
  48,809,773
  48,810,508
G
C
T
G
A
G
A
C
G
C
G
A
A
A
T/C
C
G
A
A
T
A
A
C
G
G
T
A
T
T
T
A
T
G
A
G
C
C
C
C
G
A
T
T
C
C
C
C
C
G
G
A
A
A
C
A
T
C
T
T
G
T
T
C
A
T
G
A/C
T
C
T
A
C
T
A
C
A
A
A
T
C
T
G
T
C
G
T
A
C
T
G
T
G
G
C
C
T
A
C
C
G
A
C
A
T
C
A
T
A
A
A
G
C
C/T
A
T
A
C
T
A
T
T
A
A
T
T
G
G
T
T
A
G
T
G
T
A
G
T
C
A