Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 99,913 (bp)   Positions: 166
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
Buf/N (MCW) 
.004
.674
.02
1.0
.001
.001
.956
.0
.034
.001
.01
.001
.011
.002
.0
.011
.012
.001
.002
.0
.0
.002
.0
.919
.002
.11
.112
.008
.078
.101
.139
.002
.002
.0
.599
.364
.003
.216
.105
.142
.859
.002
.004
.004
.003
.03
.012
.001
.001
.376
.005
.009
.001
.014
.03
.001
.747
.374
.028
.104
.211
.0
.046
.005
.053
--
.0
.063
.203
.051
.68
.001
.005
.084
.083
.011
.052
.043
.056
.004
.002
.0
.001
.013
.29
.59
.009
.001
.0
.001
.051
.008
.01
.004
.002
.012
.12
.079
.066
.207
.017
.034
.001
.01
.007
.001
.004
.002
.001
.014
.01
.001
.006
.008
.003
.005
.0
.003
.0
--
.23
.001
.001
.001
.0
.001
.002
.511
.026
.027
.001
.001
.01
.0
.0
.064
.013
.225
.025
.436
.015
.058
.987
.001
.001
.0
.021
.045
.128
.176
.001
.003
.002
.0
.237
.001
.003
.0
.068
.06
.318
.002
.006
.02
.01
.011
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
Vmp1
G
A
G
C
A
T
C
G
G
A
C
A
G
A
A
G
C
C
C
T
A
T
C
A
A
G
C
C
G
T
C
T
C
G
A
T
G
C
T
T
C
C
C
G
C
A
C
T
T
T
T
C
T
T
A
A
T
C
C
G
T
A
A
T
G
C
C
T
T
C
G
G
A
C
A
G
A
G
G
T
C
C
G
C
C
A
C
T
A
T
A
C
G
G
C
C
G
C
T
G
A
A
T
C
C
C
A
C
T
C
C
G
A
C
T
T
G
T
A
G
T
G
A
C
A
T
T
A
G
T
A
A
G
A
T
C
A
C
A
T
G
A
A
T
C
C
G
G
T
T
T
A
A
C
A
C
G
G
T
C
C
G
A
T
A
G
  73,902,038
  73,902,553
  73,903,224
  73,903,597
  73,903,789
  73,905,038
  73,905,534
  73,908,074
  73,908,960
  73,909,284
  73,911,576
  73,914,007
  73,914,370
  73,914,630
  73,915,765
  73,920,262
  73,920,305
  73,920,353
  73,920,393
  73,920,396
  73,920,808
  73,921,424
  73,921,457
  73,922,301
  73,922,452
  73,923,433
  73,923,831
  73,927,232
  73,927,250
  73,930,249
  73,930,480
  73,931,914
  73,932,860
  73,932,870
  73,932,915
  73,934,687
  73,935,255
  73,936,023
  73,936,033
  73,937,039
  73,937,118
  73,937,401
  73,937,405
  73,937,458
  73,937,872
  73,937,994
  73,938,348
  73,939,871
  73,940,899
  73,941,892
  73,942,094
  73,942,194
  73,943,588
  73,944,080
  73,944,525
  73,945,728
  73,945,819
  73,946,137
  73,946,800
  73,948,224
  73,950,615
  73,952,638
  73,953,031
  73,955,235
  73,955,416
  73,957,701
  73,958,244
  73,958,475
  73,959,387
  73,960,344
  73,963,336
  73,964,091
  73,965,508
  73,967,337
  73,967,338
  73,968,384
  73,968,546
  73,968,757
  73,968,762
  73,969,150
  73,969,760
  73,970,271
  73,970,416
  73,970,501
  73,970,504
  73,970,882
  73,971,080
  73,971,543
  73,971,571
  73,971,645
  73,972,159
  73,972,445
  73,972,464
  73,973,001
  73,973,299
  73,973,691
  73,974,316
  73,974,344
  73,974,596
  73,974,624
  73,974,866
  73,975,102
  73,975,241
  73,975,381
  73,975,393
  73,975,745
  73,975,924
  73,976,052
  73,976,067
  73,976,152
  73,976,235
  73,976,609
  73,976,729
  73,976,786
  73,976,835
  73,977,016
  73,977,360
  73,977,933
  73,978,325
  73,978,638
  73,978,840
  73,981,034
  73,981,051
  73,981,087
  73,981,103
  73,981,156
  73,981,298
  73,981,666
  73,982,609
  73,982,870
  73,983,093
  73,983,108
  73,983,411
  73,983,983
  73,984,124
  73,984,429
  73,985,420
  73,985,979
  73,988,073
  73,988,788
  73,989,405
  73,989,808
  73,989,997
  73,991,941
  73,993,809
  73,994,280
  73,994,999
  73,995,150
  73,995,168
  73,995,710
  73,995,928
  73,996,890
  73,996,892
  73,997,042
  73,997,806
  73,998,263
  73,998,445
  73,999,108
  73,999,186
  73,999,187
  73,999,481
  74,000,202
  74,000,936
  74,000,963
  74,000,974
  74,001,118
C
G
A
T
T
C
T
A
C
G
A
G
G/T
C
G
A
T
T
A
G
C
C
T
T
G
A
G
T
A
A
A
G
T
T
G
C
A
T
C
C
A
C/G
C/G
A
A
G
T
C
T/A
A
G
T
C
C
C
A/G
C
T
T
A
C
G
C
C
A
T
T
C
C
T
A
C
G
T
G
A
G
T
A
A
T
A
G/A
T
T
C
T
C
G
C
G
T
A
A
T
A
A
T
C
T
G
C
C
T
T
T
G
T
C
A
A
A
G
A
C
G
T
C
T
A
C
G/A
G
T
G
C
C
G
A
C
G
T
A
T
G
T
T
T
C
C
A
G
G
C
T
T
C
A
C
C
C
C
C
G
G
A
A
A
A
A
A
C
A/G
C
G
A