Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 136,582 (bp)   Positions: 117
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
BN-Lx/CubMcwi (2019) 
.061
.299
.001
.007
--
--
--
.122
.107
.089
.064
.038
.028
.016
.009
.013
.018
.004
.002
.0
.001
.003
.004
.015
.011
.011
.003
.014
.02
.058
.104
.384
.418
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.001
.108
.013
.002
.0
.006
.0
.0
.0
.003
.007
.0
.004
.001
.022
.114
.046
.028
.001
.004
.015
.001
.002
.002
.048
.031
.009
.0
.001
.001
.047
.019
.004
.001
.001
.004
.004
Tshr
Tshr
Tshr
Tshr
Tshr
Tshr
Tshr
Tshr
Tshr
Tshr
Tshr
Tshr
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
2
T
-
-
-
-
A
G
-
T
4
-
T
C
G
2
9
A
A
A
A
-
2
3
-
G
T
A
C
G
C
-
T
A
C
C
A
G
C
T
G
G
G
C
C
G
C
G
T
C
G
C
C
T
G
C
C
C
C
C
G
T
T
A
G
C
G
C
C
T
G
A
T
C
T
T
A
A
A
C
-
C
C
C
C
C
G
C
G
C
C
C
C
C
-
2
T
C
-
G
-
4
C
2
A
4
A
T
-
C
G
G
T
T
T
T
T
  115,175,640
  115,198,662
  115,198,710
  115,198,723
  115,198,763
  115,198,780
  115,198,824
  115,205,659
  115,205,665
  115,205,670
  115,205,675
  115,205,680
  115,205,691
  115,205,705
  115,205,712
  115,205,718
  115,205,723
  115,205,733
  115,205,734
  115,205,738
  115,205,739
  115,205,743
  115,205,746
  115,205,753
  115,205,759
  115,205,762
  115,205,773
  115,205,785
  115,205,786
  115,205,789
  115,205,792
  115,205,801
  115,205,817
  115,206,736
  115,206,754
  115,206,766
  115,206,774
  115,211,018
  115,211,027
  115,211,046
  115,211,073
  115,211,088
  115,211,106
  115,211,111
  115,211,122
  115,211,179
  115,211,230
  115,211,255
  115,211,342
  115,211,457
  115,211,483
  115,211,496
  115,211,499
  115,211,519
  115,211,564
  115,211,576
  115,212,114
  115,212,984
  115,213,016
  115,214,401
  115,214,405
  115,214,426
  115,215,211
  115,215,269
  115,216,138
  115,216,167
  115,216,169
  115,216,195
  115,216,233
  115,227,071
  115,228,197
  115,228,439
  115,228,679
  115,228,748
  115,228,798
  115,228,804
  115,228,812
  115,229,095
  115,229,114
  115,229,124
  115,238,041
  115,238,053
  115,238,055
  115,238,059
  115,238,064
  115,238,074
  115,238,103
  115,238,104
  115,238,109
  115,238,114
  115,238,118
  115,238,139
  115,238,201
  115,238,207
  115,238,209
  115,238,213
  115,238,287
  115,238,291
  115,252,944
  115,252,948
  115,252,954
  115,283,617
  115,283,626
  115,283,644
  115,283,677
  115,283,686
  115,283,698
  115,283,704
  115,283,707
  115,283,722
  115,284,656
  115,284,659
  115,285,278
  115,285,283
  115,285,285
  115,285,288
  115,285,289
2/-
-
T
A
CA/T
C
C/C
T
G
-
-
T
-
-
A
-
-
G
C
G
G
G
-
-
T
-
-
-
T
-
-
A
-
A/C
C/G
C/T
A/G
G/T
C/A
T/A
G/T
G/C
G/A
C/T
C/A
G/T
C/A
G/C
-
C/G
G/A
C/T
C/T
T/C
G/A
C/G
C/A
C/A
C/-
C/T
G/A
T/A
T/C
A/G
G/A
C/T
G/C
C/A
C/A
G
A
G
A
C/T
T/A
T/A
A/T
A/G
A/T
C/T
T
A
A
A
G
A
C
T
C
A
G
G
A
G
2
-
-
-
2
-
C
-
-
-
-
-
-
-
2
G
-
A
A
G
C
C
A