Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 34,078 (bp)   Positions: 94
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
COP/CrCrl (MCW & UW) 
.001
.0
.001
.0
.003
.742
.006
.039
.112
.003
.034
.006
.181
.0
.0
.005
.0
.012
.995
.995
.987
.299
.917
.527
.485
.602
.031
.123
.231
.488
.049
.136
.092
.0
.0
.002
.011
.009
.002
.006
.0
.014
.004
.0
.005
.002
.0
.001
.001
.009
.0
.001
.008
.001
.002
.017
.0
.001
.0
.015
.002
.0
.004
.0
.0
--
--
.015
.034
.0
.001
.013
.137
.0
.0
.0
.0
.0
.0
1.0
.001
.001
.007
.023
.047
.098
.026
.028
.005
.0
.0
.001
.063
.0
Tom1
Tom1
Tom1
Tom1
Tom1
Tom1
Tom1
Tom1
Tom1
Tom1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
G
G
T
T
T
G
C
G
T
C
C
G
C
C
G
T
C
A
T
G
T
G
C
A
C
C
G
C
C
C
G
T
T
T
G
G
G
A
G
G
G
C
G
C
T
A
G
T
A
C
G
C
G
C
A
C
G
C
A
T
C
G
G
G
C
C
C
C
A
C
T
T
G
A
T
A
A
C
T
G
T
G
G
A
T
C
T
A
C
A
C
A
A
  14,392,613
  14,392,998
  14,393,101
  14,393,155
  14,393,358
  14,393,483
  14,394,333
  14,396,011
  14,397,654
  14,397,932
  14,398,010
  14,398,022
  14,398,107
  14,398,226
  14,398,408
  14,399,912
  14,399,939
  14,400,031
  14,400,590
  14,400,598
  14,400,638
  14,400,655
  14,401,360
  14,401,556
  14,401,594
  14,401,604
  14,401,646
  14,401,654
  14,401,664
  14,401,796
  14,401,856
  14,401,894
  14,401,916
  14,402,220
  14,402,221
  14,402,425
  14,402,465
  14,402,468
  14,402,509
  14,402,608
  14,402,619
  14,403,174
  14,404,028
  14,404,823
  14,404,968
  14,405,238
  14,405,605
  14,405,808
  14,406,228
  14,406,297
  14,406,891
  14,406,940
  14,406,975
  14,407,027
  14,407,044
  14,408,104
  14,409,818
  14,410,771
  14,411,090
  14,411,292
  14,412,749
  14,413,442
  14,413,959
  14,414,069
  14,414,362
  14,415,475
  14,415,480
  14,415,486
  14,415,490
  14,417,416
  14,418,964
  14,419,115
  14,419,620
  14,419,688
  14,420,095
  14,421,025
  14,421,508
  14,421,648
  14,421,916
  14,421,934
  14,422,221
  14,422,541
  14,422,670
  14,422,861
  14,423,057
  14,423,127
  14,424,006
  14,424,007
  14,424,038
  14,424,906
  14,424,988
  14,425,026
  14,425,515
  14,426,012
G
A
C
C
G
A
A
T
A
C
T
A
C
G
T
C
C
T
A/G
T/C
G/A
T/A
A
T
A/G
T
C/T
G/A
T
T
T
G/A
C
G
C
A
A
A
G
A
A
A
T
A
G
C
G
A
C
G
T
A
T
A
T
C
T
A
T
G
C
T
T
C
C
C/T
C/T
C/T
C/T
G
G
G
G
A
G
C
G
G
T
C
C
C
T
A
G
C
A
G
G
T
G
T
G
G