Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 130,091 (bp)   Positions: 198
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
ACI/EurMcwi (RGD) 
.728
.0
.0
.001
.0
.0
.0
.0
.003
.006
.036
.01
.0
.0
.001
.001
.047
.0
.0
.002
.031
.001
.006
--
.0
.004
.007
.001
.008
.07
.005
.001
.0
.0
.001
.169
.0
.001
.014
.002
.0
.0
.003
.001
.001
.029
.008
.046
.005
.021
.0
.0
.0
.001
.0
.0
.0
.001
.0
.001
.002
.001
.008
.035
.014
.004
.001
.0
.002
.0
.97
.003
.0
.0
.003
.001
.722
.082
.007
.01
.097
.01
.0
.0
.0
.002
.023
.004
.0
.024
.115
.007
.0
.131
.001
.002
.025
.0
.057
.0
.016
.002
.01
.0
.0
.001
.022
.006
.0
.008
.11
.0
.002
.0
.0
.0
.0
.013
.002
.003
.013
.006
.002
.007
.0
.412
.0
.283
.0
.02
.0
.0
.0
.0
.012
.028
.001
.0
.001
.001
.001
.0
.006
.001
.007
.078
.064
.135
.964
.047
.056
.002
.001
.001
.001
.018
.081
.0
.0
.027
.002
.17
.476
.041
.043
.385
.0
.108
.007
.0
.0
.0
.017
.018
.0
.0
.0
.054
.038
.023
.0
.841
.001
.885
.001
.0
.0
.001
.017
.021
.002
.0
.001
.008
.005
.007
.003
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
Tiam1
A
C
A
A
A
C
A
A
T
A
G
G
T
T
C
T
C
T
A
T
C
C
T
G
C
T
T
A
G
T
C
G
G
C
T
G
C
C
G
G
G
C
C
C
C
C
C
A
A
A
T
C
C
C
C
A
A
T
C
G
G
A
A
T
C
T
A
C
G
C
T
T
A
C
A
A
G
A
G
G
A
G
G
C
C
G
C
A
G
T
T
A
T
T
T
C
T
G
T
A
T
C
C
G
C
C
T
G
T
T
C
T
G
G
T
A
T
C
T
A
T
T
T
T
A
A
C
A
G
A
T
G
G
A
C
T
G
G
T
A
A
T
A
A
A
A
A
C
A
G
T
C
T
A
C
A
C
A
A
C
G
A
A
G
T
C
C
T
T
T
T
C
A
C
A
A
T
A
C
G
A
C
A
C
T
G
A
T
T
A
A
A
G
T
C
G
T
A
  29,931,534
  29,934,016
  29,934,020
  29,934,193
  29,934,340
  29,934,449
  29,934,503
  29,934,769
  29,934,776
  29,934,906
  29,936,432
  29,936,622
  29,936,677
  29,938,102
  29,939,139
  29,939,496
  29,941,708
  29,944,239
  29,945,238
  29,946,730
  29,947,245
  29,947,374
  29,948,525
  29,948,608
  29,952,213
  29,954,258
  29,959,077
  29,959,528
  29,959,729
  29,961,419
  29,961,543
  29,961,664
  29,961,696
  29,961,791
  29,961,802
  29,961,913
  29,961,932
  29,961,969
  29,961,977
  29,962,302
  29,963,193
  29,963,447
  29,965,051
  29,968,030
  29,969,150
  29,969,809
  29,971,636
  29,973,314
  29,974,303
  29,974,370
  29,975,080
  29,976,213
  29,976,237
  29,976,513
  29,976,634
  29,976,654
  29,976,765
  29,976,856
  29,976,902
  29,976,976
  29,977,698
  29,977,840
  29,978,858
  29,979,331
  29,979,480
  29,979,485
  29,979,493
  29,979,866
  29,980,174
  29,980,381
  29,980,466
  29,980,773
  29,981,042
  29,981,507
  29,981,519
  29,981,527
  29,981,803
  29,982,157
  29,982,193
  29,982,219
  29,982,462
  29,982,697
  29,982,834
  29,983,326
  29,983,371
  29,983,825
  29,984,028
  29,985,967
  29,986,055
  29,986,271
  29,986,281
  29,990,137
  29,990,760
  29,990,825
  29,991,055
  29,991,685
  29,993,032
  29,993,074
  29,993,083
  29,993,192
  29,993,333
  29,993,423
  29,994,233
  29,994,361
  29,994,960
  29,995,184
  29,995,362
  29,995,369
  29,995,557
  29,995,621
  29,995,757
  29,995,905
  29,996,029
  29,996,808
  29,997,013
  29,997,165
  29,997,358
  29,997,474
  29,997,485
  29,997,710
  29,998,641
  29,998,664
  29,998,726
  29,999,714
  30,000,092
  30,000,698
  30,001,122
  30,003,662
  30,003,734
  30,004,794
  30,005,028
  30,005,645
  30,009,815
  30,010,454
  30,019,507
  30,019,844
  30,019,913
  30,020,921
  30,021,046
  30,023,005
  30,026,387
  30,026,746
  30,026,750
  30,027,064
  30,027,309
  30,028,085
  30,028,399
  30,028,808
  30,029,389
  30,031,200
  30,031,706
  30,032,464
  30,032,605
  30,034,487
  30,034,649
  30,036,178
  30,036,428
  30,037,091
  30,037,818
  30,038,141
  30,038,635
  30,038,686
  30,038,704
  30,038,766
  30,039,258
  30,039,587
  30,040,187
  30,040,367
  30,042,143
  30,042,601
  30,043,783
  30,044,441
  30,044,612
  30,044,879
  30,045,919
  30,046,333
  30,046,935
  30,047,018
  30,047,244
  30,047,589
  30,049,137
  30,050,987
  30,051,475
  30,053,607
  30,053,667
  30,053,989
  30,054,203
  30,054,474
  30,054,481
  30,055,478
  30,057,015
  30,057,572
  30,057,638
  30,058,220
  30,058,906
  30,058,936
  30,059,097
  30,059,859
G
T
G
G
G
T
G
G
C
T
A
T
C
C
T
G
T
C
C
C
T
T
G
A
T
A
G
G
A
C
T
A
A
A
G
A
G
T
A
A
A
A
T
G
T
T
T
G
G
G
C
T
A
T
T
G
G
C
T
A
C
G
G
C
A
C
C
A
T
G
C
C
C
T
G
C
A
G
A
A
C
A
G/T
T
A
T
T
G
A
G
C
G
G
A
C
T
C
C
C
G
C
T
T
A
T
T
C
A
C
C
A
C
A
A
C
G
G
T
C
C
C
G
C
C
G
G
T
G
A
G
C
A
A
G
A
C
A
A
G
C
G
C
T
G
G
T
C
T
G
C
G
T
G
T
A
G
T
C
T
A
A
C
G
A
C
T
T
C
C
G
C
A
C
A
G
G
C
C
T
A
G
T
G
T
A
A
G
G
C
G
G
G
A
C
G
A
C
G