Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 317,877 (bp)   Positions: 536
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
.842
.01
.003
.001
.031
.001
.082
1.0
.998
.935
.158
.168
.007
.009
.0
.018
.999
.634
.087
.001
.0
.0
.002
.404
.373
.014
.057
.008
.068
.171
.051
.046
.0
.0
.003
.008
--
.007
.004
.0
.03
.003
.001
.018
.074
.073
.002
.007
.005
--
.021
.019
.0
.172
.0
.024
.0
.009
.001
.033
.014
.02
.001
.002
.333
.002
.002
1.0
.024
.025
.0
.006
.904
.001
.0
.001
.985
.036
.139
.001
.003
.135
1.0
.003
.002
.0
.005
.176
.995
1.0
.138
.017
.0
.001
.087
.039
.012
.0
.657
.001
.024
.0
.002
.212
.004
1.0
1.0
1.0
.777
.441
.683
.241
.253
.009
.004
.002
.002
.038
.003
.085
.007
.624
.043
.003
.004
.165
.002
.001
.001
.43
.7
.0
.0
.276
.001
.38
.353
.001
.0
.004
.0
.001
.0
.0
.001
.996
.164
1.0
.0
.013
.016
.112
.019
.002
.0
.005
.118
.005
.002
.021
.274
.001
.0
.0
.014
.0
.001
.001
.072
.0
.163
.0
.382
.669
.159
.0
.018
.006
.013
.136
.001
.036
.002
.008
.044
.454
.002
.001
.001
.002
.417
.003
.002
.155
.0
.005
--
--
--
.002
--
--
.0
.002
.002
.0
.001
.001
.0
.001
.0
.001
--
--
--
--
--
--
--
.256
.45
.03
.004
.014
.003
.027
.857
.155
.014
.0
.012
.026
.018
.001
.001
.0
.014
--
.01
.01
.006
.002
.004
.04
.003
.053
.111
.0
.001
.059
.023
.0
.005
.015
.001
.001
.003
.015
.003
.344
.057
.005
.017
.0
.016
.003
.176
.011
.562
.0
.218
.274
.0
.002
.561
.731
.0
.014
.0
.001
.012
.171
.996
1.0
.212
.007
.014
.004
.319
.036
.311
.013
.003
.001
.025
.637
.657
.073
--
--
--
--
--
--
.009
.256
.001
.281
.001
.003
.001
.002
.022
.002
.1
.558
.007
.043
.013
.002
--
--
.007
.004
.002
.025
.145
.006
.016
--
.26
.716
.073
.019
.94
1.0
.004
.017
.013
.022
.344
.006
.145
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.0
.001
.0
.0
.285
.001
.009
.001
.002
.077
.0
.001
.311
.118
.031
.032
.0
.002
.0
.001
.723
.001
.0
.971
.843
.0
.011
.04
.001
.46
.023
.016
.313
.002
.01
.0
.001
.002
.647
.0
.064
.003
.002
.013
.01
.014
.005
.006
.055
.0
.006
.007
.007
.812
.74
.019
.002
.018
--
.169
.001
.009
.004
.004
.013
.0
.003
.068
.0
.247
.012
.004
.109
--
--
--
--
--
--
--
--
.33
.026
.05
.026
.005
.001
.59
.581
.146
.002
.014
.451
.039
.379
.636
.059
.008
.006
.003
.001
.577
.013
.0
.001
.0
.001
.0
.002
.009
.003
.069
.004
.039
.045
.001
.112
.155
.016
.001
.0
.094
.0
.0
.0
.0
.12
.01
.403
.401
.066
.015
.001
.0
.036
.001
.0
.246
.0
.0
.001
.001
.001
.0
.205
.011
.061
.198
.199
.004
.0
.523
.0
.029
.0
.008
.129
.004
.011
.001
.124
.005
.01
.001
.0
.001
.001
.003
--
.97
.001
.016
.001
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
Thada
A
G
G
T
A
G
T
A
T
G
G
G
C
A
G
G
C
G
C
A
T
G
G
G
G
T
A
A
C
C
A
G
G
C
T
A
T
C
C
T
G
T
T
C
A
G
A
C
G
T
G
G
G
G
C
C
A
A
A
A
A
G
G
C
T
A
T
G
T
T
G
C
C
C
G
T
C
A
C
G
A
G
A
C
C
C
T
C
G
A
G
T
A
G
C
G
T
A
C
G
A
G
A
G
A
C
T
G
G
T
T
T
A
C
G
A
T
C
A
C
A
C
C
A
A
T
G
G
G
T
A
A
C
A
A
T
T
T
A
A
C
C
T
C
T
T
C
A
T
C
A
A
G
T
C
A
G
A
C
A
G
G
G
G
C
T
A
T
A
C
A
C
G
C
A
A
A
G
T
T
A
C
A
G
C
A
C
C
G
T
A
T
C
T
G
A
C
C
C
C
G
A
C
A
T
A
C
G
G
G
G
C
G
G
A
G
A
T
T
G
A
G
A
C
T
C
G
A
A
C
G
C
G
A
G
C
G
C
C
A
C
G
T
T
G
A
T
G
C
C
A
C
C
T
G
A
T
G
G
C
G
T
T
G
T
C
G
G
A
T
A
T
A
A
T
C
C
G
T
T
A
G
A
G
A
C
G
G
C
G
T
A
A
T
G
T
A
A
G
T
G
G
T
A
G
A
A
A
C
C
C
C
C
C
A
T
A
T
T
C
C
T
G
T
C
A
T
C
A
T
C
C
C
A
C
A
G
T
T
A
A
C
G
C
C
T
C
A
A
G
T
T
T
C
T
T
C
T
G
T
G
T
G
T
C
C
C
G
A
A
G
C
C
G
T
A
T
C
A
C
A
C
A
C
A
T
T
G
G
T
C
A
T
T
G
T
T
T
A
C
T
G
C
A
C
G
T
C
T
G
A
A
T
G
G
G
G
G
A
G
T
A
A
A
C
G
G
T
T
A
C
T
G
G
G
C
C
C
C
T
C
T
T
G
T
C
G
C
T
G
A
G
G
G
A
A
C
C
C
A
A
T
T
C
A
A
C
C
T
A
A
T
T
T
T
C
G
A
C
T
C
C
A
G
G
A
A
A
C
T
G
G
T
G
T
G
G
A
A
C
C
C
T
G
T
T
C
G
C
G
C
A
T
C
A
T
G
C
G
T
G
T
C
C
G
A
G
C
A
C
G
A
A
T
G
T
  7,429,486
  7,430,680
  7,430,948
  7,452,969
  7,474,102
  7,486,471
  7,486,516
  7,489,154
  7,489,296
  7,489,311
  7,495,717
  7,495,727
  7,497,591
  7,522,218
  7,550,982
  7,552,324
  7,552,846
  7,552,910
  7,558,703
  7,561,380
  7,562,535
  7,562,581
  7,562,690
  7,565,693
  7,568,699
  7,571,615
  7,572,860
  7,573,730
  7,574,354
  7,574,387
  7,575,220
  7,575,222
  7,576,519
  7,576,791
  7,578,568
  7,579,991
  7,583,912
  7,584,077
  7,584,152
  7,584,612
  7,586,955
  7,587,772
  7,588,203
  7,588,313
  7,588,353
  7,588,701
  7,588,931
  7,589,159
  7,589,857
  7,590,580
  7,592,353
  7,592,578
  7,593,103
  7,593,471
  7,593,695
  7,593,799
  7,593,838
  7,593,882
  7,593,906
  7,593,921
  7,593,927
  7,593,929
  7,593,933
  7,594,632
  7,596,027
  7,596,128
  7,596,176
  7,597,205
  7,598,616
  7,598,618
  7,599,699
  7,599,969
  7,600,205
  7,601,006
  7,601,121
  7,601,645
  7,602,290
  7,602,392
  7,602,578
  7,602,606
  7,602,926
  7,602,983
  7,603,518
  7,604,132
  7,604,139
  7,604,431
  7,604,921
  7,605,036
  7,605,215
  7,605,391
  7,605,644
  7,605,951
  7,605,984
  7,605,999
  7,606,119
  7,606,606
  7,606,761
  7,606,842
  7,606,870
  7,606,924
  7,606,931
  7,606,955
  7,607,206
  7,607,289
  7,607,521
  7,607,812
  7,607,834
  7,607,921
  7,608,348
  7,608,389
  7,608,539
  7,608,985
  7,608,986
  7,609,065
  7,609,179
  7,609,198
  7,609,208
  7,609,587
  7,609,897
  7,609,980
  7,610,443
  7,610,595
  7,611,025
  7,611,496
  7,611,542
  7,611,626
  7,612,215
  7,612,434
  7,612,543
  7,612,561
  7,612,623
  7,612,698
  7,612,797
  7,612,964
  7,613,260
  7,613,373
  7,613,376
  7,613,611
  7,614,398
  7,614,691
  7,615,824
  7,615,861
  7,616,239
  7,616,683
  7,616,773
  7,616,988
  7,617,231
  7,617,334
  7,617,600
  7,617,757
  7,617,759
  7,617,773
  7,617,779
  7,618,100
  7,618,186
  7,618,282
  7,618,406
  7,618,527
  7,618,541
  7,618,668
  7,619,432
  7,619,600
  7,619,899
  7,619,909
  7,620,176
  7,620,587
  7,620,708
  7,620,732
  7,620,938
  7,621,284
  7,621,652
  7,621,701
  7,621,899
  7,622,433
  7,622,779
  7,622,917
  7,623,309
  7,623,361
  7,623,374
  7,623,387
  7,624,092
  7,624,136
  7,624,381
  7,625,063
  7,625,917
  7,626,590
  7,626,854
  7,626,866
  7,627,057
  7,627,231
  7,627,511
  7,627,538
  7,627,860
  7,627,980
  7,628,251
  7,628,615
  7,629,045
  7,629,190
  7,629,283
  7,629,470
  7,629,483
  7,629,708
  7,630,253
  7,630,316
  7,630,638
  7,630,760
  7,630,932
  7,631,208
  7,631,422
  7,631,497
  7,631,502
  7,632,252
  7,633,425
  7,633,707
  7,634,043
  7,634,144
  7,634,616
  7,635,346
  7,635,772
  7,636,376
  7,637,089
  7,637,312
  7,637,355
  7,637,402
  7,637,420
  7,637,496
  7,638,509
  7,638,570
  7,638,633
  7,638,642
  7,638,805
  7,638,844
  7,638,872
  7,638,958
  7,639,119
  7,639,205
  7,639,247
  7,645,322
  7,645,610
  7,645,613
  7,645,615
  7,645,708
  7,645,778
  7,645,871
  7,645,905
  7,646,044
  7,646,436
  7,646,449
  7,647,155
  7,647,870
  7,647,912
  7,648,002
  7,648,158
  7,648,318
  7,648,827
  7,648,831
  7,648,929
  7,648,994
  7,649,124
  7,649,268
  7,649,308
  7,649,579
  7,649,720
  7,649,999
  7,650,437
  7,650,531
  7,651,028
  7,651,353
  7,651,378
  7,651,608
  7,651,738
  7,651,775
  7,652,290
  7,652,302
  7,652,420
  7,653,154
  7,653,177
  7,653,221
  7,653,759
  7,653,841
  7,653,990
  7,654,141
  7,654,198
  7,654,312
  7,654,602
  7,654,626
  7,654,966
  7,655,035
  7,655,163
  7,655,289
  7,655,364
  7,655,426
  7,655,568
  7,655,618
  7,655,691
  7,655,821
  7,655,824
  7,655,924
  7,670,273
  7,670,311
  7,670,381
  7,670,406
  7,670,476
  7,670,668
  7,673,167
  7,673,291
  7,673,600
  7,674,155
  7,674,488
  7,674,594
  7,674,605
  7,674,909
  7,675,083
  7,675,226
  7,675,280
  7,675,340
  7,675,564
  7,675,710
  7,675,869
  7,675,881
  7,676,133
  7,676,267
  7,676,442
  7,676,692
  7,676,742
  7,676,836
  7,676,892
  7,676,987
  7,677,048
  7,677,723
  7,678,246
  7,678,401
  7,678,515
  7,679,030
  7,679,071
  7,679,754
  7,679,950
  7,680,006
  7,680,007
  7,680,045
  7,680,144
  7,680,251
  7,680,914
  7,680,959
  7,681,493
  7,681,915
  7,681,991
  7,682,466
  7,682,557
  7,682,874
  7,683,181
  7,683,959
  7,684,364
  7,684,387
  7,684,524
  7,684,711
  7,685,110
  7,685,195
  7,685,738
  7,686,014
  7,686,184
  7,686,244
  7,686,662
  7,686,709
  7,686,845
  7,687,630
  7,687,828
  7,687,844
  7,687,886
  7,689,002
  7,689,154
  7,689,550
  7,689,594
  7,689,601
  7,689,738
  7,689,745
  7,689,847
  7,689,956
  7,690,021
  7,690,130
  7,690,428
  7,690,861
  7,691,125
  7,691,939
  7,692,091
  7,692,425
  7,692,503
  7,692,649
  7,692,654
  7,692,750
  7,692,886
  7,692,939
  7,693,320
  7,693,721
  7,694,366
  7,695,131
  7,695,241
  7,695,417
  7,695,548
  7,696,179
  7,696,682
  7,696,836
  7,697,085
  7,697,095
  7,697,329
  7,697,366
  7,697,557
  7,697,609
  7,697,617
  7,697,747
  7,697,813
  7,697,996
  7,698,421
  7,699,587
  7,699,783
  7,699,877
  7,699,892
  7,700,086
  7,700,187
  7,700,286
  7,700,845
  7,701,662
  7,701,929
  7,702,063
  7,702,107
  7,702,286
  7,702,507
  7,702,929
  7,704,046
  7,704,153
  7,704,310
  7,704,454
  7,704,533
  7,706,022
  7,706,047
  7,706,475
  7,706,652
  7,706,723
  7,706,734
  7,707,058
  7,707,173
  7,707,240
  7,707,301
  7,707,997
  7,708,582
  7,708,712
  7,708,732
  7,708,836
  7,709,198
  7,709,441
  7,709,977
  7,709,984
  7,710,623
  7,710,656
  7,710,703
  7,711,003
  7,711,010
  7,711,287
  7,711,416
  7,711,934
  7,712,242
  7,712,464
  7,712,701
  7,712,948
  7,712,965
  7,713,223
  7,713,233
  7,713,344
  7,713,473
  7,713,945
  7,714,364
  7,715,423
  7,715,823
  7,715,886
  7,716,044
  7,716,112
  7,716,328
  7,716,535
  7,716,907
  7,716,982
  7,717,056
  7,718,514
  7,719,051
  7,719,321
  7,719,422
  7,719,587
  7,719,709
  7,720,090
  7,720,198
  7,720,222
  7,720,648
  7,720,650
  7,720,896
  7,721,178
  7,721,402
  7,721,527
  7,721,616
  7,721,772
  7,722,026
  7,722,039
  7,722,609
  7,722,646
  7,722,648
  7,722,700
  7,722,913
  7,723,290
  7,723,861
  7,724,908
  7,725,201
  7,725,229
  7,725,230
  7,725,257
  7,725,269
  7,725,553
  7,725,909
  7,726,089
  7,726,229
  7,726,878
  7,726,921
  7,726,950
  7,727,041
  7,727,083
  7,727,700
  7,727,851
  7,727,919
  7,737,128
  7,737,162
  7,737,903
  7,737,971
  7,738,359
  7,739,023
  7,739,376
  7,739,811
  7,740,155
  7,740,259
  7,741,352
C
T
C
C
A/G
T
C
G
C
C
G/T
G/T
T
G
A
A
A
C
T
G
C
A
A
T
C
C
G
G
T
G
G
A
A
T
C
G
C
A
T
A
A
C
A
G
T
A
G
G
A
C
A
T
C
A
T
T
C
G
C
C
C
C
C
T
A
G
G
A
C
C
T
T
G
T
T
A
T
G
G
T
G
A
T
T
T
G
A
T
T
G
C
C
G
A
G
A
C
G
G
T
G
T
G
T
T
T
C
T
A
T/C
C
A
C
G
A
G
C
T
G
A
A/C
T
T
T
G
G
A
A
A
C
G
G
G
G
C
C
G
A
C
A/C
T
G
A
G
G
C
T
G
C
G
G
C
A
C
T
C
A
G
T
C
A
T
A
A
A
C
T
C
G
A
C
A
A
T
G
G
G
C
C
C
G
T
G
A
G
G
A
G
A
C
G
C
T
C
A
T
C/G
T
T
A
A
G
T
G
C
T
T
A
A
A
A
G
A
T
A/G
A
A/G
C
C
T
G
A
G
T
C
T
A
G
T
T
A
T
A
T
A
T
T
C/T
A
A/T
C/A
A
G
C
T
C
C
T
A
T
G
A
G
C
G/C
A/C
C
A
A
T
A
C
A
A
G
T
C
C
G
C
G
C
T
C
C
A
T
A
A
A
G
A
G
C
G
A
T
A
G
A
C
G
A/G
A
C
C
T
T
C
C
A
C
C
G
A
C
G
T
T
G
A
T
A
A
G
C
C
T/C
C
G
T
C
A
A
T
G
C
G
T
C
T
T
G
T
A
G
C
C
A
G
T
T
A
A
A
T/C
T
C
T
T
T/C
C
T/A
A
C
T/G
T
T/C
T
C
T
A
A
C
T
T
A
C
G
G
A
T
T
C
G
G
A
T
G
T
G
G
G
A
G
G
A
A
A
G
G
C
C
C
T
C
C
A
T
T
C
A
T
G
T
A
C
T
C
C
G
A/G
G
A
A
A
A
T
G
A
G
G
G
G
C/T
G/A
A
C
G
G
T
C
A
A
A
G
A
T
T
T/C
T
G
C
A
C
T
A
T
C
A
G
C
T
A
G
G
T
T
G
T
G
G
C
T
T
G
T
T
C
G
G
T/A
A
C
A
T
A
G
T
C
T
T
G
A
A
G
G
G
C/A
C
T
G/T
A
A
C
A
A
G
G
A
T
G
C
A
C
C
G
A
G
C
A
G
C
T
G
C
A
G
C
C
A
C
T
T
A
A/T
A
A
G
T
A
G
G
G
A
C