Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 198,898 (bp)   Positions: 396
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
.003
.0
.0
.0
.002
.004
.007
.008
.0
.0
.687
.0
.003
.071
.557
--
.0
.001
.006
--
--
--
.002
.125
.001
.0
.002
.0
.002
.406
.002
.029
.119
.341
.008
.006
.99
.0
.004
.109
.013
.014
.04
.042
.019
.002
.042
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.181
.068
.0
.0
.0
.018
.065
.001
.001
--
--
--
--
--
--
--
--
--
--
.0
.165
.006
.002
.227
.227
.114
.037
.171
.375
.062
.049
.028
.005
.001
.921
.876
.889
.036
.765
.856
.925
.202
.013
.014
.01
.001
.119
.049
.006
.001
.013
.0
.014
.017
.007
.107
.0
.005
.004
.015
.001
.005
.008
.0
.0
.0
.001
.0
.0
.0
.001
.0
.0
.537
.004
.0
.004
.0
.003
.0
.003
.266
.0
.002
.0
.394
.001
.001
.0
.0
.0
.0
.0
.412
.004
.014
.001
.001
.005
.125
--
--
.001
.005
.003
.027
.16
.003
.908
.006
.55
.015
.059
.002
.13
.0
--
--
.015
.852
.0
.004
.592
.423
.304
.051
.009
.002
.001
.015
.002
.195
.207
.0
.012
.001
.001
.008
.045
.003
.011
.093
.074
.086
.039
.014
.008
.02
.014
.004
.002
.018
--
.005
.001
.004
.021
.001
.003
.0
.91
.006
.042
.124
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.0
.008
.001
.003
.0
.0
.003
.028
.005
.0
.037
.018
.27
.0
.0
.156
.002
.019
.002
.301
.009
.006
.0
.001
.069
.0
.001
.0
.002
.021
.001
.119
.026
.0
.0
.0
.006
.0
.0
.073
.0
.0
.0
.035
.263
.001
.003
.0
.001
.004
.075
.003
.003
.261
.231
.004
.005
.018
.017
.362
.399
.292
.053
.013
.002
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.079
.078
.076
.073
.069
.0
.038
.06
.021
.945
.104
.067
.006
.001
.0
.003
.0
.001
.404
.0
.089
.006
.004
.003
.001
.001
.002
.001
.023
--
--
--
.962
.48
.023
.333
.001
.001
1.0
1.0
.998
.236
.998
.024
.313
.124
.087
.001
.001
.021
.004
.084
.049
.001
.019
.005
.634
.001
.001
.002
.07
.012
.0
.001
.004
.001
.025
.842
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
Tbc1d1
A
T
T
G
A
C
A
G
T
G
A
2
C
T
T
-
G
G
-
C
T
G
T
A
C
T
-
G
T
C
-
C
C
-
T
-
G
C
C
T
T
C
A
G
T
T
G
-
T
T
T
T
C
T
T
A
C
C
T
C
C
G
A
A
G
A
A
T
G
A
A
G
C
C
C
C
T
T
C
G
A
T
T
5
G
G
C
C
C
-
C
C
A
C
T
A
A
A
C
2
-
T
G
T
C
2
T
-
3
C
-
2
A
G
A
C
-
T
G
T
G
A
T
C
T
C
T
T
G
T
C
C
C
C
C
T
T
A
G
G
G
T
G
G
T
G
C
T
T
G
C
-
C
C
C
C
-
-
T
A
C
G
26
-
A
T
T
G
A
A
27
C
C
T
G
T
11
C
C
G
T
A
T
A
-
T
A
T
G
T
C
A
G
G
G
G
A
G
G
A
G
A
C
T
T
T
G
G
T
C
C
9
C
T
C
C
G
T
C
C
A
C
T
G
T
T
G
A
C
A
-
-
A
-
-
2
-
A
G
-
A
T
A
2
2
A
A
A
T
G
C
T
T
C
G
T
C
T
C
T
C
G
G
T
-
T
G
A
A
C
G
G
T
T
G
A
C
A
T
13
T
T
T
G
G
C
A
C
T
T
T
G
G
G
C
A
T
4
-
2
-
-
G
A
T
-
A
-
C
16
G
G
G
G
3
G
T
G
G
G
C
G
C
C
A
T
T
C
C
C
C
C
C
4
T
T
T
C
A
T
C
A
C
T
C
A
A
T
A
-
C
C
T
C
2
A
A
T
-
5
C
A
T
-
C
C
T
-
C
C
C
G
C
G
-
G
G
A
-
G
T
G
G
G
C
G
T
-
T
-
T
T
A
T
4
-
  45,599,095
  45,599,101
  45,599,102
  45,599,108
  45,599,120
  45,599,121
  45,599,124
  45,599,125
  45,599,137
  45,599,138
  45,599,299
  45,600,723
  45,601,834
  45,602,088
  45,602,423
  45,602,930
  45,604,218
  45,606,409
  45,606,803
  45,607,202
  45,607,708
  45,607,709
  45,608,476
  45,608,731
  45,609,358
  45,611,741
  45,612,982
  45,615,570
  45,615,626
  45,615,932
  45,616,648
  45,617,518
  45,617,932
  45,618,503
  45,619,229
  45,621,374
  45,621,864
  45,622,934
  45,622,955
  45,623,307
  45,624,011
  45,624,357
  45,624,364
  45,625,028
  45,625,626
  45,626,649
  45,626,901
  45,627,417
  45,627,419
  45,627,426
  45,627,427
  45,627,428
  45,627,450
  45,627,652
  45,627,654
  45,627,801
  45,628,283
  45,628,498
  45,628,683
  45,628,783
  45,629,051
  45,630,043
  45,630,693
  45,631,608
  45,632,289
  45,633,507
  45,633,647
  45,633,764
  45,636,156
  45,639,386
  45,640,670
  45,640,716
  45,640,777
  45,640,778
  45,640,785
  45,640,794
  45,640,805
  45,640,879
  45,640,921
  45,641,051
  45,645,350
  45,646,656
  45,648,495
  45,648,498
  45,648,542
  45,648,544
  45,649,833
  45,649,877
  45,649,936
  45,650,178
  45,651,579
  45,653,280
  45,653,300
  45,653,592
  45,654,097
  45,655,537
  45,655,542
  45,655,544
  45,655,580
  45,655,588
  45,655,591
  45,655,602
  45,655,614
  45,655,623
  45,655,634
  45,655,637
  45,655,654
  45,655,669
  45,655,673
  45,656,947
  45,656,980
  45,657,713
  45,657,779
  45,657,808
  45,657,824
  45,658,958
  45,659,096
  45,660,338
  45,661,775
  45,663,941
  45,665,388
  45,665,676
  45,666,460
  45,667,790
  45,671,844
  45,671,996
  45,672,591
  45,674,950
  45,675,091
  45,675,409
  45,675,564
  45,676,141
  45,681,961
  45,686,240
  45,687,007
  45,687,787
  45,689,454
  45,690,480
  45,690,613
  45,691,474
  45,692,131
  45,692,697
  45,692,867
  45,693,698
  45,693,849
  45,694,638
  45,694,983
  45,695,851
  45,695,852
  45,701,360
  45,702,616
  45,703,121
  45,703,125
  45,703,126
  45,704,676
  45,707,917
  45,710,288
  45,710,300
  45,715,150
  45,715,356
  45,715,701
  45,716,663
  45,717,314
  45,719,573
  45,719,714
  45,720,792
  45,720,999
  45,721,739
  45,722,035
  45,723,029
  45,723,413
  45,723,798
  45,724,055
  45,724,313
  45,724,903
  45,725,519
  45,727,037
  45,728,048
  45,729,094
  45,732,741
  45,733,237
  45,733,391
  45,733,823
  45,735,394
  45,735,621
  45,735,652
  45,735,925
  45,735,984
  45,736,084
  45,736,136
  45,736,288
  45,736,323
  45,736,352
  45,736,358
  45,736,692
  45,736,711
  45,736,967
  45,737,214
  45,737,477
  45,737,752
  45,737,906
  45,737,983
  45,738,575
  45,738,613
  45,738,620
  45,738,768
  45,739,251
  45,739,533
  45,739,900
  45,740,027
  45,740,096
  45,740,116
  45,740,250
  45,741,061
  45,741,659
  45,741,796
  45,741,915
  45,741,974
  45,742,096
  45,742,588
  45,742,595
  45,742,722
  45,743,094
  45,743,409
  45,743,723
  45,744,453
  45,744,454
  45,744,666
  45,744,907
  45,745,563
  45,745,574
  45,745,590
  45,745,625
  45,745,636
  45,745,646
  45,745,654
  45,745,690
  45,745,738
  45,745,739
  45,745,756
  45,745,766
  45,745,838
  45,745,992
  45,746,323
  45,746,327
  45,746,828
  45,747,111
  45,747,126
  45,747,174
  45,747,909
  45,747,981
  45,748,724
  45,749,281
  45,749,410
  45,749,598
  45,750,146
  45,750,175
  45,750,720
  45,750,988
  45,751,217
  45,751,281
  45,751,620
  45,751,731
  45,751,820
  45,751,891
  45,752,348
  45,752,508
  45,752,716
  45,752,723
  45,752,759
  45,752,824
  45,753,874
  45,753,905
  45,756,348
  45,756,786
  45,756,793
  45,757,049
  45,757,197
  45,757,370
  45,757,483
  45,757,887
  45,758,205
  45,758,519
  45,758,520
  45,758,712
  45,758,738
  45,759,314
  45,759,352
  45,759,424
  45,759,437
  45,759,968
  45,760,095
  45,760,288
  45,760,368
  45,760,723
  45,760,724
  45,760,755
  45,760,757
  45,760,770
  45,760,775
  45,761,589
  45,761,599
  45,761,639
  45,761,718
  45,761,942
  45,762,114
  45,762,150
  45,762,154
  45,762,427
  45,762,591
  45,762,719
  45,762,868
  45,763,228
  45,763,229
  45,763,295
  45,763,299
  45,763,300
  45,763,343
  45,763,551
  45,763,593
  45,763,695
  45,763,783
  45,764,083
  45,764,276
  45,764,384
  45,764,386
  45,764,483
  45,764,508
  45,765,371
  45,765,373
  45,765,375
  45,765,377
  45,765,379
  45,765,576
  45,766,161
  45,766,715
  45,766,790
  45,767,473
  45,767,785
  45,767,790
  45,768,108
  45,768,194
  45,768,438
  45,768,614
  45,768,694
  45,768,804
  45,769,048
  45,769,119
  45,769,477
  45,769,648
  45,769,777
  45,770,318
  45,770,905
  45,770,909
  45,770,927
  45,771,133
  45,771,835
  45,772,749
  45,772,759
  45,772,791
  45,773,078
  45,773,190
  45,773,216
  45,773,296
  45,773,390
  45,773,420
  45,773,772
  45,774,200
  45,774,367
  45,774,497
  45,774,893
  45,775,944
  45,776,591
  45,776,701
  45,777,664
  45,777,785
  45,779,916
  45,780,964
  45,782,049
  45,782,908
  45,783,459
  45,783,800
  45,784,907
  45,787,800
  45,787,874
  45,788,633
  45,789,781
  45,792,345
  45,793,295
  45,793,339
  45,793,645
  45,795,209
  45,795,898
  45,796,351
  45,796,637
  45,797,155
A/C
T/C
T/A
G/A
A/T
C/T
A/G
G/A
T/C
G/A
G
-
T
G
C
4
A
A
C
C/T
C
C
C
T
T
A
3
C
C
T
6
G
G
13
C
3
A
T
T
C
-
T
C
A
C
C
A
G
C
C
C
C
A
A
A
G
C/T
C/T
C
T
C/A
A
G
G
A
C
C
C
A
G
A/G
G/A
C/T
C/G
C/T
C/A
T/A
T/A
C/T
G/T
C
-
A
-
A
A
G
T
A
3
T
T
C
G
-
-
-
-
-
-
A
-
A
-
A
-
-
22
-
T
-/A
-
G
T
T
T
A
C
C
-
A
G
G
T
A
A
G
C
A
C
T
T
G
T
T
C
C
G
A
A
A
A
T
C
G
A
T
C
C
C
A
A
C/A
C/A
T
T
6
2
C
T
T
A
-
C
C
C
C
A
T
G
-
T
T
C
A
A
-
T
A
A
-
G
G
-
G
C
T
C
A
-
T
T
A
A
A
A
T
T
A
G
A
G
T
-
A
C
T
C
C
T
T
-
T
C
G
T
A
C
G
-
G
T
C
A
C
C
A
G
G
G
3
A
T
G
C
-
C
C
A
2
-
C
G
-
-
G
G
C
A
A
T
C
C
A
C
C
G
C
T
C
T
A
A
C
A
C
A
C
G
G
C
A
C
C
T
G
T
C
C
-
C
C
C
A
A
T
T
G
C
C
G
A
A
A
A
C
-
-
C
-
5
G
C
G
C
G
G
13
T
-
A
A
A
A
-
-
A
C
T
A
T
A
T
-
G
G
G
T
A
A
A
A
A
-
C
C
C
T
G
C
G
C
A
C
T
T
C
C
G
2
T
T
C
T
-
T
G
C
6
-
T
G
-
A
T
T
C
T
T
T
G
A
T
T
G
A
A
G
A
A
C
A
C
C
T
A
C
C
C
C
A
C
G
C
-
G