Variant Visualizer (Variants)

Submit Data | Help | Video Tutorials | News | Publications | Download | REST API | Citing RGD | Contact

Sequence Annotation

Assembly Rnor_6.0

Conservation

Genes ( + )

Genes ( - )

Rnor 6.0

F344/NCrl (2019)

.009	.003	.002	.0	.001	.0	.002	.054	.0	.0	.0	.0	.002	.0	.019	.0	.0	.0	.0	.0	.001	.0	.0	.004	.001	.0	.0	.0	.0	.006	.003	.0	.001	.005	.011	.029	.0	.002	.084	.004	.001	.0	.007	.002	.054	.002	.243	.001	.045	.045	.158	.175	.053	.071	.006	.001	.0	.0	.011	.0	.01	.0	.001	.027	.263	.093	.001	.026	.008	.0	.0	.0	.041	.026	.001	.003	.003	.0	.498	.002	.001	.001	.001	.008	.003	.004	.01	.001	.0	.0	.036	.004	.004	.001	.004	.744	.765	.013	.002	.053	.003	.002	.333	.04	.013	.635	.014	.03	.047	.031	.002	.069	.001	.0	.0	.001	.001	.002	.0	.005	.011	.001	.0	.001	.025	.001	.178	--	--	.298	.072	.043	.494	.018	.057	.023	.001	.862	.001	.0	.0	.0	.0	.0	.001	.0	.002	.011	.0	.001	.002	.004	.015	.013	.029	.369	.002	.012	.279	.014	.013	.005	.014	.14	.028	.03	.002	.003	.054	.066	.053	.0	.001	--	--	--	--	--	--	--	--	--	.397	.001	.001	.008	.0	1.0	.996	1.0	.003	.011	.001	.035	.041	.001	.0	.003	.041	.002	.001	.003	.269	.997	.012	.001	.004	.002	.002	.019	.179	.0	.116	.0	.003	.008	.02	.031	.001	.011	.004	.0	.072	.001	.0	.0	.408	.008	.005	.034	.003	.007	.019	.001	.002	.003	.001	.0	.003	.001	--	--	.03	.03	.011	.178	.008	.929	.006	.07	.082	.011	.01	.019	.001	.017	.051	.006	.003	.0	.0	.061	.189	.034	.021	.068	.0	.0	.011	.0	.004	.135	.007	.001	.002	.0	.329	.009	.017	.022	.022	.001	.269	--	.657	.026	.016	.013	.002	.03	.025	.03	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.275	.013	.038	.001	.0	.258	.0	.041	.0	.0	.011	.026	.02	.052	.001	.0	.003	.005	.0	.005	.0	.003	.0	.001	.004	.0	.0	.0	.0	.001	.002	.005	.0	.0	.0	.007	.004	.008	.003	.0	.001	.0	.0	.003	.033	.0	.001	.0	.0	.68	.002	.0	.002	--	--	--	--	--	--	--	--	--	.0	.006	.79	.438	.07	.001	.011	.0	.001	.0	.0	.001	.0	.0	.0	.002	.007	.001	.001	.002	.005	.109	.003	.014	.044	.041	.008	.001	.0	.005	.006	.004	.001	.002	.001	.013	.003	.018	.062	.016	.013	.006	.045	.028	.003	.044	.003	.001	.261	.321	.25	.049	.004	.005	.005	.001	.002	.007	.003	.0	.0	.0	.0	.0	.001	.001	.001	.0	.0	.002	.0	.005	.005	.001	.0	.441	.319	.0	.0	.0	.002	.022	.042	.0	.311	.158	.028	.031	.077	.826	.301	.059	.822	.152	.008	.014	.105	.001	.003	.012	.013	.005	.001	.003	.003	.199	.064	.004	.018	.003	.001	.0	.001	.0	.0	.001	.002	.038	.013	.034	.008	.002	.007	.006	.003	.125	.03	.003	.051	.14	.109	.387	.015	.033	.083	.0	.0	.0	.005	.0	.0	.163	.005	.017	.386	.021	.008	.051	.052	.004	.001	.002	.001	.004	.005	.009	.013	.015	.035	.0	.058	.0	.0	.002	.475	.003	.569	.048	.004	.067	.075	.0	.004	.0	.007	.002	.441	.0	.078	.014	.015	.177	.357	.001	.004	.001	.002	.012	--	--	--	.003	.001	.007	.004	.003	.001	.001	.0	.011	.0	.0	.004	.0	.002	.0	.0	.241	.001	.003	.056	.0	.774	.001	.023	.002	.012	.061	.0	.0	.05	.076	.052	.085	.092	.1	.098	.072	.059	.02	.008	.227	.293	.504	.01	.038	.02	.013	.001	.006	.0	.038	.001	.027	.007	.109	.014	.02	.012	.001	.0	.002	.053	.002	.001	.0	.001	.005	.01	.0	1.0
Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1										Syndig1
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
G	-	G	G	C	T	C	A	T	-	T	A	A	A	A	A	C	G	C	C	G	A	A	A	C	C	T	G	T	-	T	A	A	A	5	G	G	A	T	G	A	T	C	A	C	T	C	C	C	A	T	C	C	C	G	3	G	G	C	T	A	2	C	A	T	C	T	G	A	T	A	C	T	T	C	A	T	T	C	T	A	T	A	-	4	T	A	T	A	T	C	T	G	G	T	G	T	A	23	A	T	3	A	T	T	T	G	-	T	G	G	C	T	A	C	G	C	T	T	C	A	A	T	T	C	C	-	-	T	A	C	T	G	T	T	A	G	G	C	A	A	-	T	-	4	T	G	G	-	G	T	A	T	A	-	C	2	-	A	-	C	A	G	G	-	A	G	-	5	-	C	A	C	T	T	A	T	T	T	-	T	T	G	9	3	-	T	G	G	G	G	T	T	-	-	T	C	A	A	G	A	A	C	A	T	T	A	A	A	T	C	C	A	G	C	A	T	T	T	C	A	T	A	T	G	A	A	-	C	A	-	C	T	C	G	T	T	T	-	G	T	G	G	C	A	A	A	2	G	3	T	T	G	A	-	C	T	A	G	G	C	4	T	T	G	2	A	C	-	-	A	C	-	T	-	A	T	4	A	G	3	G	C	G	C	-	-	-	G	T	G	-	G	A	-	-	-	C	-	C	-	G	G	G	2	G	T	C	-	A	-	G	A	-	-	G	G	C	3	T	A	C	G	T	A	G	T	T	G	C	G	G	G	A	A	G	G	A	C	T	C	G	A	A	C	C	T	T	C	T	G	G	T	C	A	C	T	-	C	A	-	A	G	A	A	A	T	G	G	C	T	G	C	A	G	G	C	T	C	G	C	A	G	G	G	A	T	T	C	C	C	A	C	G	G	A	8	G	A	T	G	C	C	C	T	G	A	C	A	T	2	C	G	G	T	A	C	T	G	C	T	T	G	G	C	T	C	G	G	G	T	G	C	A	-	C	T	G	T	G	C	-	G	C	A	T	A	-	2	G	A	C	G	T	G	G	T	A	C	C	A	A	2	-	A	-	G	C	C	A	T	C	16	A	C	A	A	A	A	A	T	A	A	A	C	G	A	C	T	T	T	C	G	T	-	T	A	G	A	A	C	A	A	G	G	A	-	A	A	T	G	G	C	A	A	A	T	T	C	A	G	5	C	G	A	G	T	G	A	A	G	A	T	G	A	C	C	C	G	C	A	T	G	G	C	G	T	T	T	C	T	G	T	T	G	C	C	T	T	C	C	G	G	C	C	2	A	G	T	T	T	A	T	T	C	T	C	G	G	110	G	G	G	T	G	G	G	A	-	G	C	C	2	T	C	T	G	A	2	C	A	T	G	-	-	-	-	-	-	-	G	G	C	C	T	C	G	T	C	C	C	G	A	T	G	T	-	G	T	A	T	T	T	-	C	A	T	C
145,032,053	145,032,295	145,032,442	145,032,832	145,032,883	145,032,912	145,032,979	145,033,411	145,033,900	145,034,056	145,034,066	145,034,345	145,034,460	145,034,507	145,034,517	145,034,776	145,035,027	145,036,544	145,036,547	145,036,650	145,036,656	145,037,111	145,037,621	145,037,817	145,038,643	145,038,723	145,038,745	145,038,891	145,038,984	145,038,997	145,039,256	145,039,270	145,039,362	145,039,463	145,039,660	145,039,677	145,039,695	145,039,785	145,039,852	145,040,032	145,040,042	145,040,177	145,040,218	145,040,374	145,040,846	145,040,862	145,041,131	145,041,272	145,041,559	145,041,841	145,042,025	145,042,070	145,042,150	145,042,277	145,042,485	145,042,599	145,042,613	145,042,717	145,042,787	145,042,862	145,042,881	145,042,970	145,043,108	145,043,156	145,043,363	145,043,472	145,043,811	145,043,961	145,044,092	145,044,237	145,044,482	145,044,665	145,044,918	145,045,018	145,045,049	145,045,508	145,046,151	145,046,425	145,046,451	145,046,849	145,046,935	145,046,945	145,047,166	145,047,656	145,047,793	145,047,924	145,048,029	145,048,570	145,049,021	145,049,066	145,049,172	145,049,685	145,049,831	145,049,952	145,050,041	145,050,258	145,050,334	145,050,572	145,050,836	145,050,963	145,051,244	145,051,441	145,051,898	145,051,931	145,052,259	145,052,424	145,052,848	145,052,901	145,052,908	145,052,933	145,053,171	145,053,337	145,053,954	145,053,968	145,054,487	145,054,534	145,054,628	145,056,258	145,056,297	145,056,602	145,056,608	145,057,611	145,057,641	145,059,463	145,060,394	145,060,842	145,061,333	145,061,543	145,061,653	145,062,046	145,062,756	145,063,173	145,063,634	145,064,326	145,065,187	145,066,536	145,069,752	145,070,023	145,070,335	145,070,630	145,070,670	145,070,679	145,070,680	145,070,686	145,070,690	145,070,701	145,070,712	145,070,726	145,070,746	145,070,749	145,070,750	145,070,780	145,070,817	145,070,822	145,070,899	145,070,914	145,070,965	145,070,972	145,071,007	145,071,118	145,071,140	145,071,237	145,071,261	145,071,353	145,071,366	145,071,369	145,071,395	145,071,474	145,071,617	145,071,626	145,072,689	145,074,090	145,074,544	145,077,271	145,077,888	145,077,896	145,077,912	145,078,657	145,079,195	145,079,823	145,079,829	145,079,918	145,081,559	145,083,437	145,084,157	145,084,249	145,085,212	145,085,947	145,086,369	145,086,488	145,086,924	145,087,086	145,087,353	145,087,683	145,087,685	145,087,715	145,087,742	145,087,783	145,087,802	145,089,051	145,090,015	145,090,957	145,091,255	145,091,434	145,092,286	145,093,374	145,094,055	145,094,523	145,095,012	145,095,372	145,095,413	145,095,710	145,095,781	145,095,990	145,096,021	145,096,251	145,096,301	145,096,341	145,096,713	145,096,724	145,096,979	145,097,092	145,097,332	145,097,389	145,098,977	145,099,923	145,100,514	145,100,552	145,100,555	145,100,647	145,100,730	145,100,820	145,101,092	145,101,185	145,101,738	145,102,470	145,102,785	145,103,141	145,103,971	145,104,166	145,104,392	145,104,456	145,104,536	145,104,564	145,104,819	145,105,458	145,105,753	145,106,553	145,107,376	145,107,540	145,107,638	145,107,659	145,108,034	145,108,062	145,108,109	145,108,131	145,108,154	145,108,177	145,108,178	145,108,182	145,108,183	145,108,201	145,108,211	145,108,535	145,108,751	145,109,121	145,109,584	145,109,791	145,109,862	145,109,897	145,110,052	145,110,539	145,110,567	145,111,918	145,111,971	145,112,431	145,112,890	145,113,797	145,113,816	145,113,827	145,113,830	145,113,836	145,115,109	145,116,106	145,117,268	145,117,488	145,117,492	145,117,494	145,118,188	145,118,508	145,118,612	145,118,725	145,120,199	145,120,217	145,120,274	145,120,614	145,120,618	145,120,625	145,120,641	145,120,646	145,120,650	145,120,667	145,120,675	145,120,682	145,120,686	145,120,710	145,120,728	145,120,730	145,120,947	145,120,953	145,120,959	145,120,980	145,120,981	145,121,026	145,121,066	145,121,157	145,121,590	145,121,790	145,121,829	145,121,913	145,122,012	145,124,013	145,124,231	145,124,398	145,124,430	145,124,583	145,124,585	145,124,588	145,124,784	145,125,637	145,126,515	145,127,376	145,127,505	145,127,525	145,128,135	145,128,149	145,128,411	145,128,521	145,128,567	145,128,797	145,128,845	145,129,449	145,129,495	145,129,727	145,129,844	145,130,210	145,130,500	145,130,580	145,130,681	145,130,682	145,130,753	145,131,089	145,131,091	145,131,692	145,132,420	145,132,431	145,132,464	145,132,473	145,132,786	145,132,845	145,132,890	145,133,036	145,133,085	145,133,141	145,133,254	145,133,366	145,133,507	145,133,554	145,133,590	145,133,602	145,133,618	145,133,651	145,133,715	145,133,775	145,133,785	145,134,048	145,134,049	145,134,138	145,134,144	145,134,198	145,134,333	145,134,347	145,134,360	145,134,546	145,134,579	145,134,928	145,134,964	145,134,965	145,135,005	145,135,070	145,135,075	145,135,138	145,135,186	145,135,235	145,135,386	145,135,426	145,135,449	145,136,236	145,136,614	145,136,983	145,137,138	145,137,300	145,137,301	145,137,377	145,137,608	145,137,649	145,137,893	145,138,276	145,138,291	145,138,296	145,138,406	145,138,510	145,138,541	145,138,642	145,138,648	145,138,738	145,139,038	145,139,039	145,139,090	145,139,141	145,139,143	145,139,223	145,139,340	145,139,401	145,139,507	145,139,756	145,139,809	145,139,813	145,139,877	145,140,483	145,140,511	145,140,681	145,140,719	145,141,317	145,141,386	145,141,519	145,142,169	145,142,171	145,142,293	145,142,300	145,142,301	145,142,316	145,142,328	145,142,329	145,142,336	145,142,354	145,142,363	145,142,376	145,142,381	145,142,388	145,142,397	145,142,402	145,142,416	145,142,418	145,142,745	145,142,749	145,143,105	145,143,617	145,144,224	145,144,340	145,144,737	145,144,993	145,145,025	145,145,225	145,145,227	145,145,229	145,145,300	145,145,410	145,145,421	145,145,763	145,145,997	145,146,113	145,146,115	145,146,494	145,146,536	145,146,669	145,147,299	145,147,301	145,147,303	145,147,305	145,147,512	145,148,154	145,148,267	145,148,357	145,148,748	145,149,045	145,149,143	145,149,499	145,149,643	145,149,736	145,149,781	145,149,782	145,149,821	145,149,909	145,150,661	145,150,988	145,151,659	145,151,967	145,152,230	145,152,263	145,152,314	145,152,403	145,152,572	145,152,643	145,152,855	145,153,081	145,153,097	145,153,160	145,153,280	145,153,878	145,154,081	145,154,088	145,154,820	145,155,233	145,155,785	145,156,145	145,156,262	145,156,333	145,156,563	145,156,683	145,156,905	145,156,977	145,157,026	145,157,180	145,157,465	145,157,466	145,157,626	145,157,670	145,157,823	145,158,026	145,158,245	145,158,417	145,158,657	145,158,660	145,158,673	145,158,719	145,158,854	145,159,178	145,159,549	145,159,607	145,159,763	145,159,800	145,159,950	145,160,031	145,160,035	145,160,404	145,161,763	145,162,990	145,163,040	145,163,129	145,163,816	145,164,069	145,164,226	145,164,594	145,164,671	145,164,817	145,164,928	145,164,944	145,165,322	145,165,751	145,166,654	145,167,037	145,168,216	145,169,137	145,169,466	145,171,370	145,171,578	145,171,806	145,172,109	145,172,177	145,172,268	145,172,803	145,173,175	145,173,761	145,173,824	145,174,225	145,175,911	145,180,186	145,180,511	145,181,143	145,181,403	145,181,862	145,182,016	145,182,186	145,183,099	145,183,203	145,184,756	145,185,066	145,186,563	145,187,116	145,189,134	145,190,300	145,190,838	145,190,843	145,191,289	145,191,762	145,192,013	145,192,606	145,192,608	145,192,622	145,192,631	145,192,634	145,192,637	145,192,647	145,192,650	145,192,668	145,192,681	145,192,689	145,192,721	145,192,760	145,193,032	145,193,229	145,193,596	145,193,624	145,194,077	145,194,151	145,194,381	145,194,602	145,194,752	145,195,136	145,195,489	145,195,764	145,196,175	145,196,319	145,196,526	145,196,612	145,196,809	145,196,842	145,196,913	145,196,954	145,197,288	145,197,416	145,197,438	145,197,613	145,197,719	145,198,878	145,198,997	145,199,076
C	10	C	T	T	C	A	G	C	-/A	A	G	C	T	T	G	T	A	G	T	A	G	G	C	T	T	C	A	C	C	C	G	G	T	-	A	A	G	-	A	G	C	T	G	T	C	A	T	A	G	C	G	T	A	A	-	A	A	G	G	C	-	A	G	C	T	C	A	-	G	G	A	C	C	A	G	C	C	T	C	G	-	G	10	-	C	G	C	G	C	T	A	T	A	C	A	C	G	23/-	G	C	-	G	C	C	C	A	2	G	T	A	T	G	G	T	A	T	G	A	T	G	G	G	C	T	T	4	2	C	T	T	A	C	C	-	G	C	A	T	-	-	A	A	2	-	-	-	-	G	T	G	-	-	-	G	-	-	G	T	G	-	T	-	-	G	T	A	A	-	C	A	G	G	C	C	T	C	-	C	G	G	C	T	-	3/-	T	C	A	A	-	A	C	A	3	G	C	T	G	C	T	G	G	T	G	C	G	G	G	C/5	A	T	T	G	A	T	G	C	G	G	T	T	G	T	C	T	T	G	17	A	T	2	-	G	T	A	G	C	C	2	A	C	A	A	A	T	C	G	-	A	-	-	G	-	-	T	-	-	G	C	-	A	-	-	C	C	-	G	A	A	A	G	T	3	C	A	T	-	-	G	-	-	A	A	A	T	15	3	9	T	C	A	T	T	G	C	C	A	A	A	-	A	-	-	A	-	-	C	A	A	G	2	A	G	A	A	A	C	T	-	C	G	T	A	C	C	T	C	A	C	T	A	A	A	T	G	C	A	G	T	C	T	-	G	G	A	G	A	C	A	G	A	T	G	T	C	T	G	A	A	-	A	G	A	G	T	G	G	A	A	G	C	A	T	G	A	A	T	C	G	A	G	G	C	A	A	G	G	C	T	T	T	G	T	C	A	G	-	T	C	A	C	T	T	T	C	T	T	T	T	G	-	T	A	A	A	T	G	A	A	T	G	-	A	A	T	-	-	-	-	A	A	A	G	-	4	T	G	A	C	C	A	A	C	A	-	-	G	2	-	-	-	A	-	C	A	A	G	T	T	T	C	G	-	2	C	2	T	T	T	G	C	-	-	G	G	C	G	G	G	G	C	G	-	G	G	A	G	T	C	C	C	T	A	C	A	C	T	T	G	C	T	G	G	A	A	T	2	G	G	C	T	A	T	T	G	C	C	C	T	G	A	-	T	A	G	A	C	A	T	G	A	T	C	A	G	G	T	T	A	A	-	A	A	A	T	A	G	C	G	A	G	A	C	C	A	T	T	C	A	T	T	A	A	T	T	-	C	A	C	-	-	C	A	C	T	C	T	A	A	-	A	A	A	C	A	A	A	G	A	T	T	G	2/-	T/C	G	C	A	G	-	T/T	-	-	-	T	T	G	A	C	T	C	T	A	T	A	C	A	-	C	T	A	T	C	-	C	A	G	8	-	C	G	C	C	C	34	T	G	C	A