Variant Visualizer (Variants)

Submit Data | Help | Video Tutorials | News | Publications | Download | REST API | Citing RGD | Contact

Sequence Annotation

Assembly Rnor_6.0

Conservation

Genes ( + )

Genes ( - )

Rnor 6.0

LL/MavRrrcAek (2020)

.0	.0	.001	.003	.0	.0	.003	.0	.005	.001	.005	.007	.001	.0	.0	.002	.003	.005	.147	.0	.0	.0	.002	.023	.0	.007	.016	.026	.037	.016	.563	.881	.023	.001	.137	.002	.922	.015	.049	.018	.013	.001	.002	.04	.002	.02	.047	.186	.002	.012	.002	.123	.267	.0	.0	.0	.243	.022	.009	.0	.007	.027	.021	.005	.001	.001	.001	.006	.007	.002	.041	.001	.001	.01	.018	.014	.025	.006	.004	.104	.293	.004	.611	.004	.183	.0	.0	.467	.015	.0	.002	.218	.056	.018	.159	.066	.124	.106	.012	.01	.001	.002	.001	.036	.027	.008	.0	--	.015	.0	.0	.0	.001	.002	.999	.025	.003	.01	.146	.014	.002	.003	.006	.002	.013	.017	.003	.021	.002	.001	.006	.024	.017	.0	.064	.0	.001	.0	.045	.004	.006	.082	--	--	.07	.998	.12	.0	.003	.001	.0	.071	.232	.093	.037	.049	.008	.743	.004	.002	.343	.002	.001	.005	.052	.012	.002	.001	.226	.222	.71	.002	.0	.0	.04	.079	.002	.009	.016	.0	.0	.001	.001	.108	.0	.0	.0	.012	.029	.069	.0	.001	.849	.103	.0	.004	.015	.0	--	.999	.023	.09	.003	.0	.001	.002	--	--	.071	.125	.098	.208	.194	.001	.746	.005	--	.002	.013	.012	.046	.001	.0	.0	.001	.024	.009	.0	.0	.003	.0	.003	.003	.011	.007	.001	.0	.005	.001	.001	.005	--	.393	.248	.001	.005	.007	.001	.0	.0	.008	.001	.003	.002	.062	.05	.0	.001	.0	.001	.002	.0	.005	.01	.012	--	1.0	--	.006	.0	.273	.033	.0	.016	.0	.001	.023	.0	.033	.431	.021	.002	.44	.001	.002	.012	.001	.0	.0	.046	.973	.01	.0	.246	.012	.027	.002	.003	.0	.54	.006	.722	.032	.057	.862	.901	.068	.048	.29	.014	.003	.003	.001	.001	.038	.147	.0	.054	.0	.402	.0	.0	.0	.001	.008	.005	.166	.009	.003	.12	.003	.004	.037	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.993	.023	.209	.101	.899	.004	.264	.014	.009	.132	.127	.003	.0	.211	.004	.032	.022	.079	.049	.025	.099	.033	.422	.003	.156	.035	.076	.05	.039	.003	.003	.027	.006	.006	.015	.009	.007	.886	.045	.01	.002	--	--	--	--	--	--	--	--	--	.023	.001	.0	.004	.001	.047	.046	.002	.001	.008	.553	.016	.033	.005	.015	.005	.003	.004	.004	.042	.317	.0	.004	.009	.0	.001	.018	.0	.0	.0	.0	.171	.066	.012	.088	.194	.0	.003	.961	.006	.003	.003	.001	.024	.002	.0	.0	.08	.0	.018	.117	.005	.0	.006	.004	.001	.029	.083	.0	1.0	.009	.039	.012	.001	.009	.001	.021	.0	.003	.004	.294	.271	.121	.013	.0	.06	.022	.001	.196	.123	.952	.196	.002	.002	.021	.041	.032	.002	.001	.021	.001	.005	.003	.005	.021	.396	.046	.185	.196	.016	.001	.345	.37	.396	.0	.135	.0	.021	.0	.002	.003	.794	.045	.021	.001	.0	.003	.921	.0	.001	.024	.0	.005	.0	.0	.001	.0	.0	.0	.005	.001	.0	.0	.003	.004	.0	.0	.09
Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8										Stx8
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
T	4	-	C	T	G	C	A	A	G	G	A	G	C	30	A	G	T	-	C	T	G	54	G	C	T	3	G	A	C	T	T	A	C	G	C	T	G	-	C	G	T	-	A	T	G	A	A	T	T	C	A	G	G	C	G	3	C	G	-	-	-	-	T	T	T	T	G	G	-	G	A	A	T	T	A	A	T	T	C	A	A	G	C	G	C	G	-	T	T	T	C	A	A	-	A	T	A	T	G	A	A	C	C	C	G	C	4	G	A	T	A	T	C	G	T	T	C	-	-	-	3	C	T	A	A	C	T	-	G	C	T	G	T	C	G	A	T	C	C	T	A	-	A	C	T	G	T	-	C	T	T	13	14	A	2	A	A	C	T	T	T	T	T	T	C	G	T	-	-	T	-	G	G	T	T	C	G	T	A	A	G	A	C	A	C	A	G	A	C	G	T	T	C	T	C	T	C	122	C	A	-	G	C	G	A	A	A	A	A	A	4	26	T	A	C	T	T	-	-	4	T	T	G	C	T	G	T	G	A	G	T	T	C	T	C	9	T	G	A	T	T	A	G	C	G	-	G	A	G	T	9	G	G	C	T	T	-	C	G	G	C	G	G	T	A	G	G	3	T	-	G	G	T	A	C	G	T	C	C	T	A	T	G	T	-	G	C	C	9	T	T	C	G	G	A	G	T	A	T	T	A	C	G	C	A	T	C	C	T	-	T	G	A	T	-	A	A	A	T	2	A	-	T	A	G	A	A	A	A	G	C	C	G	A	A	A	3	A	C	A	C	G	C	C	A	A	A	C	G	T	-	G	G	A	C	A	A	T	A	C	T	C	T	A	A	C	-	T	2	T	C	A	C	C	A	C	G	C	-	-	T	T	G	A	G	A	A	A	A	C	A	A	T	C	G	G	G	C	T	G	A	A	A	G	T	-	T	A	A	G	G	-	G	T	G	C	C	A	-	A	A	T	T	G	A	G	-	C	G	C	A	C	A	-	T	T	T	G	A	T	T	C	G	C	A	7	G	T	T	A	C	T	T	G	A	C	A	T	C	G	2	4	C	A	G	A	C	A	T	G	G	4	T	-	-	C	-	A	G	T	G	G	-	C	A	G	A	A	G	-	T	T	3	-	G	G	A	G	A	G	G	A	A	T	T	G	-	A	A	T	A	T	T	T	T	G	A	A	G	A	C	A	G	T	G	T	C	A	T	G	G	A	A	C	G	T	T	A	T	T	T	A	T	T	T	G	A	C
54,513,121	54,513,449	54,514,120	54,514,569	54,514,719	54,514,950	54,515,041	54,515,153	54,515,429	54,515,746	54,516,047	54,516,384	54,516,394	54,516,443	54,516,518	54,517,513	54,518,090	54,518,199	54,518,495	54,518,841	54,518,848	54,519,009	54,519,275	54,519,670	54,520,251	54,520,283	54,520,465	54,520,468	54,520,511	54,521,285	54,521,471	54,521,504	54,521,645	54,521,732	54,521,753	54,521,843	54,521,940	54,522,091	54,522,189	54,522,217	54,522,442	54,522,572	54,522,626	54,523,132	54,523,216	54,523,722	54,523,764	54,524,055	54,524,105	54,524,116	54,524,132	54,524,174	54,524,186	54,524,285	54,524,312	54,524,330	54,524,366	54,524,757	54,524,785	54,524,908	54,525,071	54,525,081	54,525,099	54,525,119	54,525,121	54,525,122	54,525,264	54,525,502	54,525,512	54,525,525	54,525,593	54,525,627	54,525,699	54,525,756	54,526,028	54,526,296	54,526,376	54,526,555	54,527,062	54,528,306	54,528,356	54,528,925	54,529,588	54,529,704	54,530,158	54,530,290	54,530,580	54,531,242	54,533,757	54,534,300	54,534,705	54,534,798	54,534,970	54,535,243	54,535,548	54,536,480	54,537,841	54,538,228	54,538,330	54,538,716	54,539,256	54,540,464	54,540,764	54,542,519	54,542,521	54,543,287	54,543,689	54,544,936	54,546,451	54,546,671	54,547,293	54,547,309	54,549,036	54,549,273	54,549,705	54,549,944	54,550,102	54,550,853	54,550,899	54,550,925	54,550,933	54,552,115	54,552,281	54,553,655	54,554,514	54,555,169	54,555,254	54,555,504	54,555,577	54,555,601	54,555,731	54,556,004	54,556,040	54,556,163	54,556,432	54,556,509	54,557,540	54,557,546	54,557,685	54,558,488	54,558,609	54,558,672	54,558,706	54,558,765	54,559,032	54,559,233	54,559,409	54,559,875	54,560,486	54,560,954	54,561,019	54,561,399	54,561,929	54,561,944	54,561,985	54,561,993	54,561,995	54,562,170	54,562,219	54,562,353	54,562,747	54,562,764	54,562,781	54,562,815	54,563,660	54,563,662	54,563,664	54,563,787	54,563,896	54,563,963	54,564,147	54,564,228	54,564,359	54,564,361	54,564,366	54,564,368	54,564,663	54,564,928	54,564,954	54,565,217	54,565,302	54,565,538	54,565,584	54,566,055	54,567,921	54,568,369	54,569,013	54,569,187	54,569,202	54,570,112	54,570,225	54,570,680	54,573,178	54,573,712	54,573,897	54,574,655	54,576,664	54,578,751	54,579,253	54,579,840	54,582,278	54,582,363	54,582,644	54,582,851	54,583,001	54,583,819	54,584,787	54,584,828	54,585,676	54,585,964	54,587,503	54,587,860	54,587,865	54,588,202	54,589,043	54,589,068	54,590,511	54,590,979	54,591,295	54,591,309	54,591,344	54,592,596	54,592,727	54,592,881	54,593,214	54,593,348	54,595,309	54,595,412	54,595,576	54,595,725	54,595,790	54,596,222	54,597,431	54,597,579	54,597,636	54,597,650	54,597,845	54,597,893	54,597,977	54,598,338	54,598,462	54,598,886	54,599,602	54,599,612	54,600,879	54,601,184	54,601,539	54,601,839	54,601,974	54,601,981	54,602,092	54,602,231	54,602,265	54,603,189	54,604,275	54,607,116	54,607,800	54,609,172	54,612,330	54,612,338	54,612,820	54,613,235	54,613,580	54,614,038	54,614,083	54,614,928	54,615,711	54,616,283	54,617,339	54,617,344	54,619,988	54,620,304	54,621,897	54,622,223	54,623,540	54,624,207	54,625,423	54,625,584	54,625,649	54,625,762	54,625,798	54,626,039	54,626,430	54,627,070	54,628,422	54,628,969	54,629,201	54,630,361	54,630,535	54,631,264	54,631,297	54,631,408	54,631,804	54,631,856	54,632,377	54,632,847	54,633,046	54,633,103	54,633,362	54,633,512	54,634,174	54,634,351	54,634,586	54,634,937	54,634,961	54,634,965	54,635,244	54,635,288	54,635,748	54,636,216	54,636,320	54,636,342	54,636,691	54,636,694	54,637,071	54,637,455	54,637,580	54,637,911	54,638,107	54,638,553	54,638,778	54,638,882	54,638,927	54,638,938	54,638,999	54,639,191	54,639,263	54,640,303	54,640,510	54,640,636	54,640,767	54,640,775	54,641,761	54,642,149	54,642,312	54,642,694	54,642,788	54,643,006	54,643,084	54,643,085	54,643,097	54,643,099	54,643,130	54,643,144	54,643,159	54,643,170	54,643,177	54,643,182	54,643,199	54,643,231	54,643,242	54,643,244	54,643,276	54,643,287	54,643,562	54,643,580	54,643,598	54,643,636	54,643,667	54,643,794	54,643,834	54,644,384	54,644,680	54,644,728	54,644,784	54,645,077	54,645,280	54,645,320	54,645,732	54,646,015	54,646,045	54,646,331	54,646,397	54,646,706	54,646,850	54,646,900	54,646,914	54,646,921	54,647,209	54,647,323	54,647,361	54,647,432	54,647,635	54,647,883	54,647,913	54,648,066	54,648,547	54,649,147	54,649,358	54,649,376	54,650,141	54,650,146	54,650,403	54,651,460	54,652,217	54,652,633	54,653,648	54,653,662	54,655,296	54,655,717	54,656,942	54,657,003	54,657,071	54,657,074	54,657,595	54,657,750	54,657,919	54,658,298	54,658,876	54,659,033	54,659,179	54,659,564	54,659,645	54,659,722	54,660,107	54,660,207	54,660,451	54,660,782	54,661,379	54,661,662	54,661,747	54,661,980	54,662,381	54,662,429	54,662,776	54,662,934	54,664,000	54,664,912	54,665,383	54,665,794	54,666,047	54,667,811	54,668,074	54,668,263	54,668,420	54,668,475	54,668,881	54,670,993	54,673,307	54,673,529	54,674,189	54,674,296	54,676,391	54,676,398	54,676,412	54,676,465	54,678,749	54,679,173	54,679,735	54,680,301	54,681,758	54,682,655	54,684,896	54,684,897	54,686,289	54,687,614	54,688,567	54,689,082	54,689,450	54,689,508	54,690,559	54,690,588	54,690,604	54,695,537	54,696,230	54,696,270	54,696,621	54,697,634	54,698,208	54,699,463	54,699,676	54,700,598	54,700,800	54,702,816	54,703,460	54,703,661	54,704,090	54,704,254	54,704,459	54,704,504	54,704,523	54,705,696	54,705,706	54,706,509	54,706,569	54,707,872	54,708,229	54,708,263	54,708,345	54,708,454	54,708,852	54,709,270	54,709,952	54,711,491	54,712,800	54,714,716	54,714,720	54,715,405	54,716,001	54,717,209	54,719,127	54,720,254	54,720,781	54,721,782	54,721,858	54,721,870	54,722,366	54,722,688	54,722,934	54,723,776	54,723,849	54,724,642	54,725,792	54,725,795	54,725,798	54,727,440	54,728,145	54,728,517	54,728,644	54,728,959	54,729,490	54,729,683	54,730,050	54,731,905	54,731,968	54,733,775	54,734,192	54,734,219	54,737,706	54,738,453	54,738,455	54,738,752	54,739,938	54,740,079	54,740,808	54,740,819	54,741,129	54,742,163	54,742,688	54,743,062	54,745,561	54,747,015	54,748,284	54,748,356	54,749,207	54,749,849	54,751,046	54,752,093	54,752,679
C	-	T	T	C	A	T	G	T	A	C	G	A	T	-	G	A	C	12	T	C	A	-	C	T	C	-	C	G	G	G	C	G	T	C	T	-	T	17	T	A	C	T	T	C	A	T	G	C	C	T	G	A	A	T	A	-	T	A	8	32	T	T	T/-	T/A	T/A	C	A	A	-/10	T	G	G	C	-	G	G	C	G	T	T	G	A	T	A	T	A	T	G	C	G	T	T/C	G	C	G	C	T	A	A	G	G	T	A	A	A	T	-	A	G	C	G	G	T	T	C	C	A	T	-/28	-/8	-	A	A	G	G	T	C	A	A	T	G	A	G	T	T	G	C	T	T	C	G	3	C	G	G	T	C	4	T	C	G	-	-	-	-	G	G	A	C	C	C	C	T/G	C	A	A	C	A	114	C	2	G/A	G/A	T/A	T/A	A	C	C	-	G	A	G	T	G	-	G	A	-	T	A	G	C	G	C	G	C	T	122/-	T	G	34	A	T	A	G	G	-	G	G	G	-	-	C	T	T	C	C	2	4	-	C	G	A	T	C	A	C	A	-	A	A	C	A	C	A	-	G	A	G	C	C	C	C	G	A	T	A	G	-	C	-	A	A	A	G	C	A	T	A	A	T	A	A	-	-	-	A	-	G	6	C	A	C	G	T	C	C	-	G	A	T	A	A	A	2	A	T	T	9/-	-	C	T	A	A	G	A	C	T	C	C	C	T	T	T	T	G	A	T	C	A	C	C	G	A	G	G	G	G	C	-	G	A	C	G	A	T	T	G	G	T	T	T	A	G	A/G	A/-	-	A/C	C/T	A/T	C/G	G/A	C/G	C/A	A/T	A/G	A/G	C/T	G/A	T/A	-/3	G/A	G/A	A/T	C/G	A/T	A/G	T/C	G	G	C	T	A	G	G	T	T	C	-	C	A	C	T	T	G	G	A	T	C	8	A	C	T	-	T	G	T	G	C	T	-	T	C	T	A	A	T	T	C	A	C	T	T	A	C	A	C	G	G	T	A	T	A	-	T	T	G	T	C	G	C	C	C	A	G	A	T	T	A	T	G	T	T	24	C	C	C	A	G	G	C	A	A	A	-	-	A	C	C	G	T	T/G	T/G	A	G	T	G	C	T	G/C	2/-	4/-	T	C	A	T	T	G	C	C	A	-	A	T	2	-	C	C	A	C	A	A	3	T	T	A	G	G	A	G	C	C	-	C	A	A	G	A	G	A	C	G	G	C	C	A	C	T	G	C	G	C	C	C	C	A	T	G	T	G	T	G	A	C	A	C	T	G	C	A	A	G	G	T	A	C	C	G	G	C	C	G	A	C	C	T	G	T