Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 21,411 (bp)   Positions: 144
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
LEXF11/Stm (2020) 
.0
.128
.017
.0
.007
.016
.032
.001
.001
.001
.0
.001
.017
.0
.001
.0
.0
.0
.001
.005
.005
.039
.009
.001
.001
.002
.0
.0
.018
.012
.009
.008
.015
.015
.0
.009
.039
.066
.0
.001
.004
.012
.001
.002
.003
.04
.013
.002
.0
.003
.0
.501
.028
.022
.777
.089
.009
.005
.0
.0
.003
.011
.0
.001
.004
.0
.002
.003
.007
.012
.014
.0
.002
.001
.0
.0
.001
.001
.001
.001
.007
.011
.004
.004
.009
.002
.0
.001
.0
.001
.0
.009
.0
.01
.0
.016
.004
.001
.0
.003
.004
.001
.006
.005
.004
.023
.0
.001
.007
1.0
1.0
.533
.007
--
.001
--
.052
.05
.007
.099
.003
.066
.001
.004
.016
.115
.002
.0
.001
.004
.005
.008
.009
.0
.006
.002
.0
.018
.0
.983
.005
.001
.0
.0
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
St6galnac6
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
C
T
T
T
-
G
-
A
G
A
-
A
2
-
T
A
T
C
G
-
-
-
-
T
-
C
G
2
A
C
T
C
G
A
G
C
G
T
T
T
T
C
G
T
G
G
2
4
C
A
A
C
5
-
T
G
-
A
A
2
C
T
A
C
-
C
G
2
T
6
G
T
C
-
G
A
C
G
T
C
T
C
C
C
C
C
C
-
A
T
-
C
C
-
G
T
A
-
-
-
2
-
C
A
-
T
C
2
-
-
T
4
T
G
A
-
C
C
2
A
A
T
G
C
A
C
A
3
T
11
A
C
-
T
G
T
A
T
G
C
C
C
G
  11,620,548
  11,621,387
  11,621,393
  11,621,396
  11,621,417
  11,621,427
  11,621,438
  11,621,445
  11,621,448
  11,621,455
  11,621,462
  11,621,465
  11,621,474
  11,621,507
  11,621,531
  11,621,549
  11,621,579
  11,621,580
  11,621,581
  11,621,630
  11,621,645
  11,621,651
  11,621,660
  11,621,672
  11,621,678
  11,621,699
  11,621,710
  11,621,733
  11,621,750
  11,621,754
  11,621,757
  11,621,780
  11,621,786
  11,621,789
  11,621,792
  11,621,801
  11,621,804
  11,621,813
  11,621,817
  11,621,834
  11,621,859
  11,621,886
  11,621,896
  11,621,925
  11,621,942
  11,621,951
  11,621,967
  11,622,033
  11,622,059
  11,623,016
  11,623,052
  11,623,231
  11,623,673
  11,624,725
  11,626,494
  11,626,963
  11,627,474
  11,627,755
  11,628,714
  11,628,716
  11,628,820
  11,628,850
  11,628,873
  11,628,875
  11,628,878
  11,628,890
  11,628,893
  11,628,900
  11,628,919
  11,628,923
  11,628,925
  11,628,933
  11,628,937
  11,628,956
  11,628,966
  11,628,968
  11,629,009
  11,629,030
  11,629,044
  11,629,054
  11,629,058
  11,629,062
  11,629,072
  11,629,101
  11,629,106
  11,629,107
  11,629,113
  11,629,141
  11,629,158
  11,629,161
  11,629,166
  11,629,171
  11,629,221
  11,629,238
  11,629,245
  11,629,265
  11,629,318
  11,629,333
  11,629,368
  11,629,388
  11,629,408
  11,629,458
  11,629,462
  11,629,464
  11,629,492
  11,629,504
  11,629,518
  11,629,519
  11,629,525
  11,629,612
  11,629,640
  11,630,384
  11,633,026
  11,633,056
  11,634,844
  11,635,374
  11,635,547
  11,635,548
  11,635,792
  11,636,334
  11,636,348
  11,636,643
  11,637,242
  11,637,417
  11,637,645
  11,637,766
  11,637,812
  11,637,853
  11,637,897
  11,637,966
  11,637,970
  11,638,153
  11,638,369
  11,638,460
  11,638,767
  11,638,871
  11,639,187
  11,639,849
  11,639,983
  11,640,095
  11,640,610
  11,640,692
  11,640,731
  11,641,146
C
-
-
C
-
G
-
C
-
-
T
A
-
-
T
-
G
C
T
-
G
C
T
G
A
A
-
-
-
G
-
-
-
A
G
-
-
-
-
-
-
-
-
-
C
-
-
-
-
T
T
T
A
-
T
-
A
20
G
G
-
-
-
G
-
G
-
-
-
-
-
-
G
-
A
C
-
-
-
-
-
-
-
-
-
G
-
-
G
G
-
G
-
-
C
T
-
-
G
T
G
-
3
T
-
C
C
T
-
G
C
C
-
G
A
G
T
T
T
-
-
T
A
A
T
G
T
G
-
C
-
G
A
7
C
A
C
G
G
A
T
A
T
C