Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 119,587 (bp)   Positions: 117
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
LH/MavRrrc (RGD) 
.001
.978
.973
.87
.001
.061
.001
.007
.008
.004
.0
.017
.183
.008
.003
.021
.001
.002
.001
.018
.006
.078
.056
.002
.008
.0
.002
.121
.117
.004
.048
.025
.005
.002
1.0
.003
.419
.05
--
.029
.105
.01
.009
.0
.03
.0
--
--
.002
.003
.035
.0
--
--
--
.027
.003
.003
.0
.077
.006
.016
.017
.001
--
--
.09
.996
.018
.991
.0
.0
.001
.0
.994
.0
.0
.005
.006
.001
.014
.054
.015
.184
.013
.026
.029
.002
.015
.001
.0
.001
.142
.002
.001
.007
.0
.006
--
.003
.005
.003
.315
.006
.004
.002
.003
.006
.003
.377
.008
.008
.003
.005
.002
.039
.002
Smarcc1
Smarcc1
Smarcc1
Smarcc1
Smarcc1
Smarcc1
Smarcc1
Smarcc1
Smarcc1
Smarcc1
Smarcc1
Smarcc1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
T
G
T
T
A
C
A
G
C
A
C
C
A
A
C
C
G
T
C
C
A
T
G
G
G
A
A
A
A
C
G
T
A
A
C
C
C
C
C
G
C
G
A
A
A
T
C
T
C
A
G
C
T
T
C
T
C
C
C
C
G
T
C
G
A
G
A
T
T
C
A
C
A
C
A
T
T
T
C
A
C
A
T
A
A
T
A
A
G
T
C
C
A
C
T
A
G
T
C
C
G
C
G
A
T
A
C
T
G
T
C
C
A
G
G
A
  118,208,528
  118,210,451
  118,210,453
  118,210,455
  118,211,432
  118,211,553
  118,211,638
  118,212,108
  118,213,426
  118,213,635
  118,214,162
  118,216,209
  118,216,418
  118,216,819
  118,217,425
  118,217,464
  118,217,839
  118,217,996
  118,218,065
  118,218,083
  118,218,315
  118,218,797
  118,220,871
  118,221,531
  118,221,565
  118,221,640
  118,222,950
  118,223,113
  118,223,120
  118,223,509
  118,223,767
  118,225,661
  118,226,420
  118,226,840
  118,230,626
  118,231,145
  118,232,333
  118,232,997
  118,234,037
  118,235,858
  118,236,733
  118,239,196
  118,239,575
  118,241,090
  118,242,645
  118,244,005
  118,245,278
  118,245,295
  118,245,338
  118,245,522
  118,246,457
  118,246,962
  118,248,546
  118,250,523
  118,250,639
  118,251,357
  118,251,548
  118,251,905
  118,252,010
  118,252,252
  118,252,560
  118,254,733
  118,254,741
  118,255,021
  118,256,275
  118,256,276
  118,256,709
  118,258,030
  118,260,243
  118,260,690
  118,260,967
  118,261,142
  118,261,227
  118,261,914
  118,267,254
  118,267,374
  118,268,381
  118,270,405
  118,270,818
  118,272,894
  118,273,034
  118,273,917
  118,274,900
  118,275,319
  118,275,556
  118,276,120
  118,278,383
  118,279,703
  118,279,706
  118,281,562
  118,282,253
  118,285,218
  118,288,959
  118,289,077
  118,289,933
  118,291,145
  118,291,294
  118,291,478
  118,291,810
  118,294,338
  118,294,340
  118,310,031
  118,310,127
  118,311,856
  118,312,314
  118,316,504
  118,316,989
  118,317,066
  118,317,085
  118,321,046
  118,321,352
  118,321,353
  118,321,356
  118,321,632
  118,321,634
  118,322,407
  118,323,673
G
A
C
C
C
C
A
C
A
G
G
T
T
G
G
T
A
A
C
T
G
T
C
A
A
T
C
G
G
C
T
T
C
T
G
T
T
G
A
T
A
T
C
T
G
C
C
A
C
T
G
A
T
G
A
T
G
T
T
T
T
T
G
T
A
G
A
G
G
A
T
C
A
C
T
G
C
C
C
T
C
G
G
C
G
G
G
G
C
A
C
A
T
G
A
A
G
A
C
A
T
A
T
C
G
C
C
A
C
A
G
T
T
G
A
T
G