Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 295,168 (bp)   Positions: 550
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
.005
.0
.0
.0
.001
.004
.0
.004
.011
.001
.001
.0
.005
.002
.008
.001
.0
.016
.002
.0
.0
.239
.0
.0
.0
.0
.007
.002
.0
.001
.01
.085
.274
--
--
--
--
--
--
--
.022
.002
.004
.013
.0
.001
.091
.0
.001
.001
.0
.0
.006
.002
.011
.078
.143
.039
.025
.019
.253
.01
.018
.0
--
.0
.0
.001
.006
.001
.114
.018
.001
.023
.0
.0
.0
.004
.0
.001
.001
.0
.016
.031
.0
.0
.009
.003
.02
.0
.0
.019
.0
.081
.001
.0
.001
.003
.003
.035
.002
.005
.096
.009
.0
.002
.997
.205
.089
.02
.539
.003
.0
.0
.333
.009
.001
1.0
.0
.002
.799
.997
.0
.001
.034
.005
.28
.057
.009
.112
.103
.351
.008
.026
.084
.307
.014
.044
.5
.121
.219
.003
.015
.006
.002
.0
.04
.001
.004
.236
.005
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.0
.0
.005
.006
.643
.119
.001
.001
.044
.027
.0
.0
.001
.042
.207
.138
.587
.599
.0
.001
.009
.0
.0
.022
--
--
.216
.358
.413
.436
.445
.463
.46
.42
.004
.005
.003
.0
.0
.0
.193
.248
.0
.87
.001
.011
.0
.029
.005
.01
.062
.172
.005
.002
.073
.079
.0
.031
.0
.004
.01
.017
.071
.0
.002
.022
.103
.004
.0
.001
.0
.042
.092
.032
--
--
--
--
--
--
--
--
.0
.0
.003
.0
.001
.113
.001
.01
.026
.0
.005
.0
.0
.0
.0
.003
.0
.876
.312
.006
.001
.901
.512
.344
.117
.033
.001
.001
.981
.101
.002
.004
.0
.0
.0
.009
.062
.003
.002
.003
.995
.986
.997
.946
.0
.0
.0
.0
.0
.0
.002
.0
.0
.001
.0
.004
.023
.009
.001
.0
.0
.0
.0
.032
.023
.001
.05
.001
.208
.003
.92
.068
.001
.488
.03
.036
.0
.001
.004
.02
.014
.04
.01
.014
.005
.059
.058
.001
.032
.027
.035
.048
.016
.001
.023
.048
.119
.01
.0
.005
.049
.004
.0
.0
.989
.0
.007
.0
.0
.004
.0
.0
.079
.005
.001
.026
.035
.001
.0
.001
.003
.0
.001
.007
.184
.03
.0
.006
.023
.571
.0
.024
.001
.001
.0
.008
.002
.008
.002
.005
.004
.038
.004
.001
.292
.0
.004
.047
--
.36
.239
.183
.01
.001
.0
.011
.001
.012
.209
.044
.002
.001
.048
.003
.072
.0
.011
.007
.007
.997
.001
.0
.815
.001
.007
.109
.057
.059
.002
.057
.001
.007
.047
.178
.103
.001
.001
.205
.026
.123
.178
.002
.997
.187
.022
.004
.0
.0
.03
.0
.001
.0
.034
.002
.0
.005
.012
.022
.001
.005
.004
.01
.226
.989
.0
.0
.0
.0
.001
.003
.0
.048
.055
.001
.0
.005
.013
.001
.0
.003
.007
.002
.01
.0
.003
.0
.194
.018
.002
.0
.001
.001
.0
.0
.0
.0
.001
.0
.001
.003
.0
.001
.126
.085
.003
.002
.002
.009
.014
.112
.0
.001
.001
.004
.002
.007
.013
.013
.0
.001
.001
.018
.006
.666
.0
.209
.055
.008
.002
.009
.134
.0
.02
.0
.002
.003
.162
.375
.0
1.0
1.0
1.0
.903
.993
.159
.44
.992
.986
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
Shisa9
A
T
G
C
T
A
G
G
C
A
G
A
A
G
A
T
T
A
G
T
C
G
T
A
T
A
G
C
G
T
C
A
T
A
G
A
C
T
C
T
T
T
C
T
T
G
G
G
G
C
C
C
A
G
T
G
C
C
G
A
G
A
C
T
A
G
G
C
C
A
T
G
A
G
A
G
A
A
C
C
G
G
A
C
T
G
A
T
T
T
A
G
A
T
A
C
G
C
A
C
A
A
T
C
A
A
C
T
A
G
G
A
C
G
G
T
C
G
C
G
T
A
A
C
G
C
C
G
G
C
C
T
G
G
T
C
T
T
T
A
T
A
A
T
C
T
T
G
A
A
C
T
C
C
G
A
G
C
G
A
C
T
C
T
T
C
T
A
A
G
A
T
A
A
T
T
T
A
C
T
G
C
A
G
T
G
A
T
T
T
T
A
A
G
A
T
T
T
A
A
G
C
C
C
C
C
A
A
T
C
G
G
C
G
G
C
G
G
T
C
C
A
A
G
C
A
C
A
G
A
T
T
A
A
T
G
G
C
G
G
A
A
C
A
C
C
T
T
T
T
T
C
G
C
T
T
G
A
C
A
G
A
A
G
C
G
C
C
C
A
A
G
T
T
T
G
A
G
C
G
T
C
G
A
A
A
T
G
A
T
A
C
A
T
G
A
C
A
C
T
A
T
T
A
A
A
G
A
T
G
A
T
C
T
G
G
G
C
A
G
A
G
C
A
C
C
C
T
A
C
T
T
A
A
A
A
A
T
C
G
G
G
T
A
A
C
C
G
G
T
G
G
C
T
A
G
G
A
A
A
C
A
C
T
C
C
A
T
A
C
G
C
C
G
C
A
A
A
C
G
C
A
A
C
C
T
C
T
T
C
G
G
G
G
T
C
G
C
T
C
G
A
G
C
G
T
G
A
T
G
C
C
A
C
G
G
T
G
T
G
A
A
C
T
G
G
G
A
C
T
C
A
C
C
C
C
C
G
A
A
G
A
A
C
A
T
A
G
G
T
T
G
G
G
T
A
G
G
G
A
T
T
C
G
G
A
G
A
A
A
T
C
A
T
T
C
A
A
T
T
G
C
C
T
C
G
T
G
C
T
C
C
G
T
T
T
A
G
C
A
A
C
A
A
G
A
G
A
A
G
G
G
A
G
T
T
G
G
G
T
C
T
A
C
A
A
G
T
C
A
C
A
T
C
G
G
C
G
G
C
G
G
T
T
T
C
A
G
G
C
  2,778,237
  2,778,388
  2,778,577
  2,778,791
  2,778,906
  2,778,971
  2,779,273
  2,779,437
  2,782,318
  2,784,435
  2,785,454
  2,790,634
  2,791,154
  2,792,053
  2,792,291
  2,792,474
  2,793,098
  2,793,154
  2,793,664
  2,793,682
  2,793,714
  2,793,995
  2,794,390
  2,794,510
  2,795,097
  2,795,914
  2,796,000
  2,796,013
  2,796,015
  2,796,110
  2,796,214
  2,796,410
  2,796,422
  2,796,464
  2,796,867
  2,796,998
  2,797,134
  2,797,425
  2,797,493
  2,797,945
  2,799,198
  2,799,444
  2,802,698
  2,803,949
  2,804,937
  2,805,283
  2,806,332
  2,807,190
  2,807,500
  2,807,501
  2,807,512
  2,808,418
  2,808,832
  2,811,670
  2,811,734
  2,811,926
  2,812,746
  2,812,784
  2,813,200
  2,813,296
  2,815,626
  2,816,239
  2,816,665
  2,816,693
  2,817,341
  2,819,011
  2,819,253
  2,819,727
  2,820,102
  2,820,202
  2,821,015
  2,821,097
  2,821,285
  2,821,840
  2,822,800
  2,822,909
  2,823,553
  2,823,740
  2,824,175
  2,824,288
  2,824,566
  2,824,666
  2,825,378
  2,826,122
  2,827,703
  2,827,729
  2,829,516
  2,829,897
  2,829,973
  2,830,334
  2,832,194
  2,833,495
  2,834,871
  2,834,929
  2,835,378
  2,838,610
  2,838,885
  2,840,529
  2,840,593
  2,841,360
  2,841,633
  2,841,661
  2,841,878
  2,842,244
  2,843,979
  2,844,723
  2,845,407
  2,845,564
  2,845,710
  2,846,139
  2,846,260
  2,846,913
  2,846,923
  2,846,954
  2,847,535
  2,847,607
  2,847,659
  2,848,016
  2,850,457
  2,851,393
  2,851,759
  2,852,700
  2,852,932
  2,854,302
  2,854,456
  2,854,653
  2,855,670
  2,856,066
  2,856,099
  2,856,359
  2,856,390
  2,856,509
  2,856,988
  2,857,181
  2,858,004
  2,858,620
  2,858,727
  2,859,671
  2,859,934
  2,860,507
  2,860,706
  2,861,136
  2,861,145
  2,861,594
  2,861,833
  2,862,110
  2,862,405
  2,862,645
  2,862,911
  2,863,177
  2,863,325
  2,863,568
  2,863,679
  2,863,691
  2,863,762
  2,864,031
  2,864,201
  2,864,305
  2,864,459
  2,865,720
  2,865,722
  2,865,821
  2,865,848
  2,865,901
  2,865,904
  2,865,976
  2,866,340
  2,866,380
  2,866,440
  2,866,496
  2,867,313
  2,867,389
  2,868,190
  2,868,920
  2,869,029
  2,869,691
  2,869,721
  2,869,754
  2,869,831
  2,870,206
  2,871,374
  2,871,762
  2,872,280
  2,873,116
  2,875,215
  2,875,225
  2,875,290
  2,875,297
  2,875,567
  2,878,642
  2,879,259
  2,880,572
  2,882,811
  2,884,045
  2,884,779
  2,884,785
  2,884,823
  2,884,857
  2,884,866
  2,884,868
  2,884,869
  2,884,873
  2,884,876
  2,884,885
  2,886,429
  2,888,431
  2,888,697
  2,893,948
  2,894,187
  2,895,623
  2,896,552
  2,896,556
  2,898,692
  2,901,766
  2,908,001
  2,909,499
  2,910,076
  2,913,768
  2,913,818
  2,913,949
  2,914,053
  2,914,117
  2,914,229
  2,914,576
  2,914,703
  2,914,704
  2,915,142
  2,915,413
  2,915,453
  2,915,936
  2,916,005
  2,916,100
  2,916,400
  2,916,494
  2,916,707
  2,916,834
  2,917,116
  2,917,151
  2,917,173
  2,918,031
  2,918,448
  2,920,282
  2,922,616
  2,922,628
  2,922,648
  2,922,654
  2,922,663
  2,922,675
  2,922,686
  2,922,692
  2,922,739
  2,922,740
  2,924,024
  2,924,296
  2,924,371
  2,924,411
  2,924,414
  2,924,491
  2,924,521
  2,924,645
  2,924,727
  2,924,789
  2,924,864
  2,925,037
  2,925,287
  2,925,497
  2,926,295
  2,926,546
  2,926,549
  2,926,612
  2,926,631
  2,927,207
  2,927,493
  2,927,709
  2,928,061
  2,928,105
  2,928,973
  2,930,026
  2,930,991
  2,932,321
  2,932,551
  2,932,812
  2,936,593
  2,937,379
  2,939,725
  2,940,527
  2,942,162
  2,948,854
  2,953,733
  2,953,782
  2,953,783
  2,953,797
  2,953,920
  2,953,966
  2,954,177
  2,959,192
  2,960,023
  2,960,171
  2,960,237
  2,960,239
  2,960,832
  2,961,373
  2,961,395
  2,961,620
  2,961,755
  2,962,016
  2,962,292
  2,962,326
  2,962,394
  2,962,423
  2,962,588
  2,962,970
  2,964,058
  2,964,065
  2,964,066
  2,964,234
  2,964,251
  2,964,252
  2,964,298
  2,964,300
  2,964,316
  2,964,332
  2,964,340
  2,964,356
  2,964,428
  2,964,446
  2,964,994
  2,965,320
  2,965,416
  2,965,454
  2,965,455
  2,965,622
  2,965,626
  2,965,722
  2,966,084
  2,966,122
  2,966,147
  2,966,970
  2,967,297
  2,967,334
  2,967,915
  2,967,933
  2,968,022
  2,968,054
  2,968,234
  2,968,565
  2,968,806
  2,968,906
  2,969,281
  2,969,373
  2,969,924
  2,970,192
  2,970,282
  2,970,336
  2,970,909
  2,971,035
  2,971,067
  2,971,315
  2,971,404
  2,972,415
  2,972,875
  2,972,942
  2,973,210
  2,973,323
  2,973,892
  2,974,240
  2,974,757
  2,974,854
  2,974,909
  2,975,233
  2,975,246
  2,975,959
  2,977,058
  2,977,196
  2,977,412
  2,977,423
  2,978,437
  2,978,690
  2,979,374
  2,979,697
  2,980,100
  2,980,699
  2,981,193
  2,982,476
  2,982,629
  2,982,795
  2,982,915
  2,983,083
  2,983,249
  2,983,848
  2,983,898
  2,984,074
  2,984,101
  2,984,291
  2,984,933
  2,984,963
  2,985,174
  2,985,445
  2,985,719
  2,985,926
  2,990,509
  2,994,297
  2,995,462
  2,995,666
  2,996,013
  2,996,275
  2,996,592
  3,000,047
  3,000,244
  3,002,847
  3,003,809
  3,003,821
  3,005,378
  3,005,396
  3,006,937
  3,007,467
  3,009,613
  3,011,088
  3,011,403
  3,012,115
  3,012,245
  3,012,584
  3,015,787
  3,015,906
  3,016,902
  3,017,142
  3,017,145
  3,017,385
  3,017,670
  3,018,047
  3,018,178
  3,018,210
  3,018,302
  3,018,324
  3,018,376
  3,018,387
  3,018,390
  3,018,467
  3,018,476
  3,018,574
  3,019,629
  3,019,717
  3,019,744
  3,020,333
  3,020,600
  3,020,620
  3,021,294
  3,021,397
  3,022,052
  3,022,057
  3,022,427
  3,023,097
  3,024,136
  3,024,349
  3,024,740
  3,024,993
  3,025,286
  3,026,216
  3,029,923
  3,033,242
  3,033,266
  3,033,342
  3,036,855
  3,042,364
  3,043,076
  3,043,170
  3,043,366
  3,043,816
  3,043,830
  3,043,885
  3,043,918
  3,043,963
  3,044,026
  3,044,060
  3,044,152
  3,044,279
  3,044,281
  3,044,741
  3,044,751
  3,044,916
  3,045,100
  3,045,771
  3,045,990
  3,046,236
  3,047,053
  3,047,611
  3,047,673
  3,048,000
  3,048,301
  3,048,912
  3,049,440
  3,050,467
  3,051,517
  3,051,697
  3,051,709
  3,051,717
  3,051,930
  3,052,870
  3,052,919
  3,052,931
  3,052,942
  3,053,530
  3,055,322
  3,055,330
  3,056,483
  3,056,495
  3,056,649
  3,056,659
  3,056,660
  3,056,714
  3,056,800
  3,056,879
  3,057,011
  3,057,183
  3,057,332
  3,057,720
  3,057,900
  3,058,031
  3,058,155
  3,058,546
  3,059,101
  3,059,189
  3,059,248
  3,059,484
  3,059,561
  3,059,804
  3,059,909
  3,059,948
  3,059,982
  3,060,047
  3,060,501
  3,060,537
  3,061,022
  3,061,047
  3,061,278
  3,061,410
  3,063,018
  3,063,235
  3,063,832
  3,071,543
  3,071,764
  3,072,108
  3,072,128
  3,072,180
  3,072,219
  3,072,223
  3,072,466
  3,072,479
  3,072,624
  3,072,842
G
G
T
T
C
G
A
A
A
G
A
G
T
C
G
C
C
C
A
C
A
C
C
G
G
C
A
T
T
C
T
G
C
G
A
T
T
A
A
C
G
A
T
C
C
A
A
A
T
T
T
T
G
A
C
T
T
T
A
T
A
G
T
C
T
C
A
T
T
G
C
C
G
A
G
A
G
G
T
T
T
C
G
T
G
T
G
C
A
C
G
A
G
C
G
T
A
T
G
T
G
G
C
T
G
G
T
C
C
A
G/C
G
A
A
T
A
C/T
A
A
A
T/C
T
G
A
A
T
A
A
A
A
T
C
A
A
A
C/T
G
C
C
G
C
G
T
C
T
C
C
A
G
G
T
C
C/G
C/T
T
G
A
T
G/T
C
A
C
T
C
C
T
A
G
G
A
G
C
T
G
A
C
A
T
T
C
A
G
G
G/C
T/C
G/A
T
C
C
C
C
C
G
A
A/C
T/C
T/A
T/C
A/C
A/C
G/T
C/T
C/T
C/T
T
T
G
G
G
A
G/A
G/A
T
C
A
A
A
A
C
T
T
C
G
A
T
G
T
G
A
G
C
C
G
G
A
C
A
T
C
A
C
C
C/A
A/C
C/T
C/T
T/G
T/G
T/G
T/G
T/G
C/A
A
T
C
C
C
A/T
T
G
T
G
T
A
T
A
T
T
C/T
A/T
A/T
C
G
T/A
C
A
G
A
G
A
C
T
A
G
G
G
C
A
G
G
T
A
C
A
C
A/T
T
G
T
C
C
C
C
G
G
T
T
G
G
A
G
C
T
C
A
G/A
T
A
A/G
G/A
A/G
G/A
C/A
A/C
G
T
T
C
G
T
G
G
T
G
G
G
G
C
T
A
C
A
C
G
G
T
T
A
C
A
A
T
T
C
G
A
A
T
G
G
A
T
G
C
A
T
G
G
G
T
A
T
T
C
A
G
G
T
T
A
T
G
C
T
T
C
T
A
C
T
A
A
T
A
A
T
C
T
C
T
G/T
T
A
T
A
C
A
C
C
A
C/G
C/G
G
A
A
C
T/G
A
C
A
G
G
T
T/C
C
A
A
T
T
C
T
C
T
A
T
T
T
A
C
G
C
G
G
T
G
A
G
A
T
C
C
A
A
A
C
G
A
A
A
G
C
C
T
C
A
G
A
G
C
C
C
T
A/G
C
C
A
T
C
G
C
T
T
T
C
T
A
C
A
A
C
T
T
A
C
A
G
C
A
A
T
G
T
C
G
G/A
G
T
G
G
A
A
A
G
A
A
G
T
A
T
C
T
C
A/C
T
G
T
C
C
G
G
T
C
G
T
A
A
T
A
A
T
C
A
G
C
G
G
C
A
C
C/G