Variant Visualizer (Variants)

Submit Data | Help | Video Tutorials | News | Publications | Download | REST API | Citing RGD | Contact

Sequence Annotation

Assembly Rnor_6.0

Conservation

Genes ( + )

Genes ( - )

Rnor 6.0

BXH3/CubMcwi (2020)

.0	.016	.561	.0	.0	.004	.0	.001	.255	.0	.001	.001	.357	.004	.0	.124	.001	.005	.037	.014	--	--	.013	.005	.012	.001	.0	.0	.002	.0	.037	.017	.006	.024	.019	.085	.003	.001	.0	.0	.003	.021	.0	.001	.001	.0	.003	.001	.002	.002	.0	.003	.122	.002	.01	.067	.196	.194	.02	.0	.002	.003	.0	.009	.001	.892	.277	.011	.003	.0	.003	.001	.0	.004	.001	.029	.004	.002	.021	.027	.004	.0	--	.003	.003	.069	.255	.262	.071	.026	.001	.002	.067	.003	.033	.003	.068	.195	.014	.071	.015	.04	.012	.004	.113	.097	.045	.009	.0	.0	.001	.061	.003	.011	.0	.053	.185	.005	.008	.028	.029	.023	.04	.047	.037	.034	.042	.165	.176	.004	.004	.002	.168	.004	.001	.022	.011	.001	.0	.001	.001	.0	.001	.006	.001	.0	.002	.0	.007	.0	.015	.0	.009	.0	.0	.002	.004	.0	.016	.013	.026	.076	.18	.418	.0	.0	.0	.0	.0	.0	.027	.038	.001	.016	.028	.009	.001	.0	.044	.098	.002	.005	.0	.013	.0	.002	.001	.004	.007	.005	.0	.0	.001	.0	.0	.0	.001	.002	.0	.003	.004	.003	.001	.001	.0	.0	.002	.002	.021	.002	.01	.002	1.0	.081	.804	.008	.083	.079	.65	.001	.003	.0	.004	.0	.007	.0	.008	.058	.076	.004	.003	.06	.001	.0	.01	.01	.001	.003	.004	.002	.005	.001	.062	.211	.216	.059	.001	.0	.0	.002	.001	.002	.003	.002	.0	.001	.0	.389	.022	.003	.257	.9	.993	.024	.14	.004	.002	.026	.176	.003	.01	.005	.002	.002	.008	.001	.0	.014	.014	.016	.012	.101	.011	.023	.151	.108	.103	.112	.106	.076	.067	.043	.087	.102	.122	--	.0	.002	.053	.011	.028	.0	.0	.0	.149	.01	.0	.0	.0	.0	.044	.001	.002	.0	.0	.001	.008	.002	.013	.011	.0	.01	.0	.001	.0	.001	.02	.0	.0	.003	.03	.002	.005	.022	.007	.982	.001	.0	.004	.001	.0	.116	.063	.068	.176	.031	.004	.001	.042	.003	.103	.554	.0	.004	--	.0	.0	.007	.0	.029	.0	.004	.028	.012	.005	.0	.001	.009	.0	.0	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.014	.26	.009	.02	.012	.008	.242	.074	.001	.015	.031	.703	.005	.0	.0	.027	.0	.996	.0	.252	.003	.0	.004	.0
Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2										Sh3tc2
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
C	T	2	A	A	A	A	T	A	C	3	2	G	C	T	T	G	C	G	C	G	C	T	-	T	G	C	C	A	C	C	C	A	A	T	A	T	T	G	T	T	G	A	G	T	T	C	T	T	T	C	-	6	A	T	-	T	T	T	T	T	-	G	C	T	C	G	G	G	T	C	-	T	T	G	T	G	C	-	A	T	C	T	-	-	T	C	T	T	T	4	A	C	C	C	G	T	G	G	3	G	T	A	T	A	T	G	C	A	T	C	C	C	G	A	A	A	T	T	T	T	A	G	3	G	T	G	T	T	T	T	A	T	A	C	G	G	A	T	A	A	G	C	C	C	A	G	C	G	A	A	A	G	-	T	G	T	G	C	G	15	C	-	C	T	T	G	A	C	G	A	A	T	T	G	T	G	A	C	A	T	C	C	-	A	G	T	T	-	G	C	T	T	T	23	C	C	A	A	C	-	T	T	2	C	C	A	G	C	T	T	G	G	T	A	A	T	C	A	C	T	C	3	A	T	A	G	-	T	C	A	A	T	T	A	C	G	T	A	G	G	A	58	2	-	T	T	G	G	A	A	T	G	C	T	G	C	A	G	T	A	T	A	A	C	A	G	C	-	T	2	G	2	C	T	2	-	2	C	C	2	C	C	G	A	C	C	-	4	2	G	C	2	2	3	-	C	G	C	G	G	T	T	G	7	106	A	T	G	A	T	T	T	2	C	T	T	G	G	T	C	A	T	A	T	C	A	A	C	C	3	G	C	C	T	-	T	T	T	T	T	C	T	G	T	A	C	T	-	A	C	A	A	C	A	G	G	A	G	C	T	A	A	C	C	T	-	G	C	44	A	C	G	G	G	G	C	G	T	T	C	C	C	T	C	G	C	T	G	C	8	A	A	C	C	A	C	G	-	G	C	-	C	C	T	A	G	T	T	3	T
57,286,517	57,288,933	57,289,115	57,292,426	57,293,939	57,295,311	57,295,330	57,298,582	57,299,404	57,299,946	57,300,518	57,303,319	57,304,658	57,305,595	57,305,666	57,305,947	57,306,561	57,306,640	57,306,859	57,308,012	57,310,249	57,310,492	57,310,570	57,310,619	57,311,579	57,311,914	57,311,948	57,312,154	57,312,196	57,312,670	57,313,419	57,314,075	57,314,177	57,314,246	57,314,387	57,314,430	57,314,494	57,314,538	57,314,618	57,315,361	57,315,661	57,315,688	57,315,772	57,315,814	57,316,032	57,316,065	57,316,081	57,316,100	57,316,171	57,316,262	57,316,504	57,316,545	57,316,889	57,316,982	57,317,269	57,317,280	57,317,350	57,317,581	57,317,928	57,318,185	57,318,194	57,319,591	57,322,475	57,322,687	57,322,771	57,323,208	57,323,895	57,324,024	57,324,183	57,324,211	57,324,394	57,324,422	57,324,711	57,324,731	57,325,039	57,325,116	57,325,125	57,325,250	57,326,319	57,326,322	57,326,714	57,326,743	57,327,193	57,328,260	57,328,278	57,328,474	57,328,660	57,329,207	57,329,288	57,329,464	57,329,772	57,329,855	57,329,887	57,329,985	57,330,003	57,330,226	57,330,355	57,330,424	57,330,458	57,330,599	57,330,723	57,330,821	57,330,880	57,330,953	57,331,275	57,331,330	57,331,370	57,331,410	57,331,438	57,331,448	57,331,476	57,331,549	57,331,650	57,331,713	57,331,737	57,331,861	57,331,908	57,331,960	57,331,971	57,332,031	57,332,032	57,332,036	57,332,043	57,332,056	57,332,060	57,332,062	57,332,064	57,332,090	57,332,091	57,332,255	57,332,257	57,332,265	57,332,331	57,332,410	57,332,432	57,332,459	57,332,481	57,332,623	57,332,720	57,332,723	57,332,729	57,332,780	57,332,885	57,332,982	57,333,007	57,333,008	57,333,040	57,333,082	57,333,103	57,333,202	57,333,224	57,333,287	57,333,384	57,333,542	57,333,589	57,333,654	57,333,697	57,333,820	57,333,840	57,334,005	57,334,122	57,334,152	57,334,179	57,334,487	57,334,592	57,334,961	57,334,962	57,335,024	57,335,083	57,335,087	57,335,108	57,335,109	57,335,123	57,335,169	57,335,209	57,335,395	57,335,435	57,335,446	57,335,460	57,335,461	57,335,515	57,335,546	57,335,593	57,335,647	57,335,684	57,335,704	57,335,765	57,335,781	57,335,883	57,335,956	57,335,967	57,335,970	57,335,974	57,336,118	57,336,120	57,336,173	57,336,371	57,336,372	57,336,388	57,336,419	57,336,425	57,336,462	57,336,565	57,336,694	57,336,740	57,336,758	57,336,828	57,336,829	57,336,958	57,336,976	57,337,091	57,337,702	57,339,029	57,339,141	57,341,308	57,341,749	57,343,738	57,343,739	57,344,168	57,344,514	57,345,186	57,345,548	57,345,841	57,347,503	57,347,770	57,347,871	57,348,174	57,348,563	57,348,664	57,348,682	57,348,737	57,348,866	57,349,076	57,349,216	57,349,488	57,349,949	57,350,287	57,350,721	57,350,861	57,351,456	57,351,704	57,352,190	57,352,399	57,352,464	57,352,467	57,352,684	57,352,966	57,353,321	57,353,363	57,354,063	57,354,358	57,354,429	57,354,487	57,354,523	57,355,247	57,355,296	57,355,571	57,355,862	57,355,886	57,356,154	57,356,284	57,356,410	57,356,439	57,356,556	57,356,925	57,356,929	57,356,930	57,356,937	57,356,949	57,356,953	57,356,966	57,356,970	57,356,984	57,356,991	57,357,008	57,357,013	57,357,023	57,357,030	57,357,037	57,357,049	57,357,051	57,357,068	57,357,078	57,357,080	57,357,097	57,357,106	57,357,107	57,357,112	57,357,116	57,357,126	57,357,128	57,357,140	57,357,147	57,357,150	57,357,155	57,358,975	57,359,773	57,361,244	57,361,549	57,362,989	57,363,030	57,364,603	57,364,849	57,365,928	57,366,017	57,368,089	57,368,297	57,368,339	57,368,504	57,368,977	57,369,143	57,369,150	57,369,166	57,369,169	57,369,478	57,369,510	57,369,571	57,370,543	57,370,642	57,371,327	57,371,356	57,371,940	57,372,830	57,373,030	57,373,722	57,373,811	57,373,942	57,375,927	57,376,004	57,378,756	57,378,781	57,378,801	57,378,802	57,379,796	57,379,881	57,380,056	57,380,463	57,380,555	57,381,829	57,382,731	57,383,432	57,383,838	57,383,846	57,383,847	57,384,040	57,384,762	57,384,814	57,385,634	57,385,970	57,385,984	57,386,233	57,386,303	57,386,320	57,386,324	57,387,063	57,388,524	57,388,552	57,388,641	57,389,096	57,389,118	57,390,121	57,390,227	57,390,247	57,390,248	57,390,899	57,390,935	57,391,287	57,391,551	57,391,640	57,392,203	57,395,389	57,396,023	57,397,566	57,397,569	57,397,736	57,397,806	57,397,971	57,397,990	57,398,112	57,398,189	57,398,236	57,398,252	57,398,262	57,398,264	57,398,360	57,398,524	57,398,536	57,398,730	57,398,875	57,399,831	57,399,855	57,399,863	57,399,866	57,400,109	57,400,193	57,401,034	57,401,055	57,401,208	57,401,349	57,401,763	57,401,805	57,401,990	57,402,008	57,402,022	57,402,192	57,402,312	57,402,552	57,402,617	57,403,311	57,403,827	57,403,859
T	C	-	C	T	G	T	C	G	T	-	-	A	T	C	C	A	T	A	T	A	T	G	14	C	A	T	T	G	T	T	T	G	T	C	G	C	C	A	C	C	T	G	A	A	C	T	C	C	C	T	A	-	-	C	22	G	C	C	G	C	T	-	T	C	T	A	T	A	C	T	9	A	C	A	G	A	G	G	G	C	T	-	-/4	-/T	C	T	-	C	C	-	G	T	T	T	A	A	A	A	-	C	C	C	C	T	G	A	T	T	C	T	A	A	T	C	G	C	C	C	A	C	G	A	-	A	A	A	C	A	C	C	T	C	G	T	A	A	G	C	G	G	A	T	T	T	G	A	T	A	G	-	G	A	T	C	A	C	A	T	A	-	T	2	T	C	C	A	G	T	T	-	G	G	C	A	C	T	C	T	G	C	A	T	2	G	A	G	C	G/A	T	T	C	C	-	-	G	T	G	G	T	3/G	C	-	-	T	T	G	A	T	C	C	A	A	G	G	G	G	T	T	T	C	T	-	T	A	G	A	2	C	T	G	G	C	C	G	T	A	C	G	A	A	G	-	-	T	C	C	C	T	G	G	C	T	T	G	A	T	G	A	C	-	C	C	G	-	G	A	-	8	-	-	-	-	-	G	-	A	-	-	-	-	-	-	-	-	-	T	G	-	-	T	-	-	-	-	T	T	A	T	T	A	C	C	C	-	-	C	C	A	G	-	C	-	-	T	G	C	A	A	C	T	T	C	G	C	T	-	G	T	T	-	T	G	T	C	T	C	G	C	-	A	-	C	T	C	G	A	C	C	G	A	G	T	T	G	A	A	G	T	T	G	G	G	T	C/A	T/A	T	A	T	-	G	C/T	T	A	G/T	G/A	T	C	T/C	T/C	C/T	C/T	C/T	T/G	C/T	G/C	C/T	C	-	T	-	T	-	G	T	G	T	A	C	A	T	T	T	T	-	G	A	G	C	-	C