Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 114,783 (bp)   Positions: 171
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SS/Jr (RGD) 
.002
.075
.006
.027
.001
.012
.011
.006
.006
.017
.012
.004
--
.016
.002
.001
.005
.0
.0
.015
.214
.005
.003
.002
.0
.025
.0
.0
.001
.012
.0
.037
.037
.041
.026
.041
.002
.773
.008
.008
.393
.002
.002
.086
.543
.025
.0
.007
.005
.001
.229
.015
.002
.014
.001
.001
.001
.158
.047
.002
.004
.001
.483
.183
.917
.002
.004
.005
.173
.022
.003
.001
.117
.011
.009
.0
.0
.001
.006
.0
.0
.002
.029
.001
.003
.074
.032
.0
.0
.0
.001
.066
.001
.004
.001
.0
.013
.002
.138
.003
.019
.005
.009
.011
.043
.04
.001
.004
.001
.006
.06
.04
.035
.003
.04
.403
.015
.006
.008
.0
.033
.003
.021
.0
.004
.0
.07
.011
.038
.0
.002
.0
.001
.0
.005
.0
.001
.0
.001
.0
.02
.0
.002
.0
.0
.002
.0
.001
.062
.025
.001
.022
.038
.009
.997
.002
.0
.012
.001
.002
.002
.0
.001
.016
.007
.0
.0
.077
.046
.007
.001
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
Serinc5
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
A
T
T
C
C
A
C
T
G
A
G
C
C
A
A
A
T
A
C
T
G
C
T
C
T
T
C
T
G
C
C
T
G
A
A
C
C
G
T
A
T
T
G
G
G
T
G
A
C
A
A
C
G
C
T
A
C
G
G
A
C
G
A
C
C
G
C
A
A
C
T
T
G
T
G
A
T
T
T
C
G
C
A
T
A
C
T
C
A
G
A
T
A
A
T
T
C
A
G
A
A
A
G
A
C
C
T
T
G
T
C
A
G
G
C
T
C
G
A
C
C
T
G
A
C
T
T
T
C
G
C
A
T
G
T
G
A
A
C
T
G
G
T
A
A
T
T
T
C
C
A
C
A
T
G
A
C
T
T
T
A
C
A
A
G
A
C
G
A
G
  22,197,247
  22,198,680
  22,201,242
  22,204,808
  22,208,267
  22,208,411
  22,209,899
  22,213,451
  22,213,886
  22,214,031
  22,218,408
  22,218,592
  22,219,598
  22,223,556
  22,225,640
  22,226,067
  22,227,724
  22,227,794
  22,229,660
  22,231,160
  22,231,620
  22,231,675
  22,231,691
  22,231,715
  22,231,941
  22,232,189
  22,232,386
  22,232,489
  22,233,355
  22,234,157
  22,234,744
  22,234,770
  22,234,850
  22,234,851
  22,234,867
  22,235,074
  22,235,367
  22,235,638
  22,236,067
  22,236,469
  22,236,500
  22,237,027
  22,237,028
  22,237,242
  22,237,416
  22,238,897
  22,239,255
  22,239,458
  22,240,202
  22,240,394
  22,240,463
  22,240,540
  22,243,553
  22,243,583
  22,243,701
  22,244,748
  22,245,768
  22,245,956
  22,245,972
  22,246,298
  22,246,572
  22,249,238
  22,249,481
  22,249,588
  22,249,603
  22,249,826
  22,250,636
  22,254,164
  22,254,853
  22,255,660
  22,256,757
  22,257,281
  22,262,800
  22,263,101
  22,263,846
  22,264,409
  22,265,069
  22,265,070
  22,265,281
  22,266,384
  22,266,696
  22,267,452
  22,267,714
  22,271,207
  22,271,278
  22,271,536
  22,271,678
  22,271,916
  22,272,933
  22,274,129
  22,274,786
  22,276,552
  22,277,719
  22,277,722
  22,277,803
  22,277,805
  22,277,873
  22,277,878
  22,279,449
  22,279,533
  22,280,046
  22,294,220
  22,295,176
  22,295,189
  22,295,565
  22,295,577
  22,296,380
  22,296,641
  22,296,870
  22,297,384
  22,297,528
  22,297,982
  22,297,983
  22,297,987
  22,298,016
  22,298,346
  22,298,450
  22,299,627
  22,299,779
  22,299,825
  22,299,991
  22,300,075
  22,300,143
  22,300,272
  22,300,306
  22,300,349
  22,300,430
  22,300,449
  22,300,455
  22,300,642
  22,300,649
  22,300,829
  22,300,965
  22,301,136
  22,301,408
  22,301,664
  22,301,679
  22,302,015
  22,302,493
  22,302,641
  22,302,900
  22,303,503
  22,303,613
  22,303,740
  22,303,880
  22,304,454
  22,304,544
  22,304,940
  22,305,210
  22,305,622
  22,305,663
  22,305,716
  22,305,724
  22,306,092
  22,306,276
  22,306,564
  22,306,720
  22,307,185
  22,307,510
  22,307,887
  22,307,949
  22,307,986
  22,308,076
  22,308,139
  22,308,245
  22,308,361
  22,308,390
  22,308,744
  22,309,003
  22,309,014
  22,309,471
T
G
C
C
G
T
G
T
A
C
G
C
G
T
G
G
C
C
G
T
C
A
T
C
A
C
A
A
G
C
T
T
C
C
G
G
T
A
A
C
C
C
C
A
C
A
C
T
G
T
G
T
G
C
G
C
T
T
A
A
T
T
A
G
G
G
A
T
G
G
G
G
C
A
C
C
G
C
C
C
T
A
T
G
C
G
T
G
A
G
A
G
A
T
G
A
G
A
G
A
G
G
G
A
G
T
T
C
C
A
C
T
G
A
A
G
A
T
A
G
T
A
A
C
G
T
A
A
A
T
A
T
G
A
A
C
A
T
G
T
C
A
A
C
G
G
G
G
A
T
T
C
T
C
C
A
G
T
C
C
A
G
A
G
G
C
G
T
T
G
A