Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 276,962 (bp)   Positions: 199
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SBN/Ygl (RGD) 
.604
.01
.028
.47
.01
.005
.022
.001
.013
.0
.004
.387
.002
.0
.0
.002
.003
.096
.0
.001
.0
.001
.0
.018
.005
.002
.98
.0
.034
.0
.0
.001
.001
.0
.0
.001
.0
.0
.0
.0
.002
.009
.0
.0
.09
.002
.0
.0
.0
.001
.001
.008
.007
.274
.087
.151
.008
.006
.061
.028
.006
.078
.391
.047
.0
.001
.002
.003
.0
.0
.001
.0
.0
.0
.0
.004
.001
.001
.0
.0
.0
.047
.004
.007
.003
.0
.001
.003
.079
.127
.011
.008
.052
.0
.165
.016
.004
.0
.0
.165
.324
.054
.001
.009
.001
.013
.002
.017
.0
.0
.0
.0
.001
.001
.002
.005
--
.001
.014
.036
.007
.058
.021
.003
.002
.001
.0
.017
.002
.076
.036
.095
.089
.029
.0
.0
.0
.003
.001
.001
.011
.025
.134
.203
.0
.003
.032
.0
.01
.043
.004
.009
.001
--
--
.006
.001
.014
.064
.05
.0
.004
.003
.0
.0
.006
.0
.001
.001
.019
.047
.647
.001
.0
.0
.0
.001
.001
.0
.0
.002
.0
.0
.0
.2
.0
.087
.001
.132
.067
.033
.033
.014
.0
.0
.047
.241
.0
.008
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
Sdk2
A
T
A
T
A
A
A
T
T
G
C
T
C
C
G
C
T
C
C
C
G
T
T
T
A
G
C
C
A
C
A
C
A
C
G
C
T
A
A
C
T
G
A
T
T
G
A
T
G
T
C
A
A
C
A
C
T
T
C
C
C
C
C
C
T
C
C
C
G
T
C
T
A
A
G
G
T
A
A
T
G
C
A
A
A
T
T
C
C
A
G
A
C
A
C
G
T
T
A
C
C
T
C
C
T
A
C
G
C
T
A
C
C
A
G
A
T
C
G
T
T
A
G
C
A
A
C
T
T
C
G
C
G
G
T
C
G
G
T
T
T
G
A
G
T
C
T
T
C
C
G
C
T
C
C
G
T
C
A
A
C
T
T
T
G
A
T
G
C
C
C
G
G
T
A
C
A
C
T
A
G
T
A
A
G
T
A
C
C
T
A
A
C
T
C
T
G
G
T
  102,299,930
  102,302,442
  102,304,183
  102,304,232
  102,305,111
  102,305,124
  102,305,149
  102,308,383
  102,308,701
  102,308,733
  102,313,356
  102,318,616
  102,320,566
  102,322,642
  102,324,281
  102,328,220
  102,330,083
  102,330,550
  102,333,259
  102,333,382
  102,333,461
  102,333,776
  102,333,783
  102,333,945
  102,334,476
  102,335,487
  102,336,506
  102,338,053
  102,338,275
  102,341,196
  102,341,309
  102,343,012
  102,343,013
  102,343,184
  102,343,444
  102,343,491
  102,343,928
  102,345,750
  102,345,835
  102,345,852
  102,346,406
  102,346,408
  102,349,495
  102,349,712
  102,352,637
  102,355,008
  102,355,693
  102,358,234
  102,358,235
  102,358,343
  102,358,385
  102,358,448
  102,358,639
  102,358,661
  102,358,831
  102,358,905
  102,359,199
  102,359,499
  102,359,501
  102,360,113
  102,360,213
  102,364,468
  102,365,573
  102,366,395
  102,368,584
  102,369,129
  102,369,973
  102,370,992
  102,371,035
  102,371,685
  102,371,810
  102,371,825
  102,373,931
  102,374,015
  102,374,307
  102,375,358
  102,375,366
  102,375,389
  102,375,393
  102,376,065
  102,376,590
  102,377,911
  102,378,213
  102,378,234
  102,379,474
  102,381,000
  102,382,271
  102,382,722
  102,385,132
  102,385,288
  102,385,800
  102,386,346
  102,387,051
  102,388,583
  102,388,862
  102,391,859
  102,392,785
  102,393,133
  102,397,915
  102,398,025
  102,398,216
  102,399,571
  102,406,217
  102,406,645
  102,408,306
  102,408,583
  102,409,241
  102,409,269
  102,409,780
  102,410,280
  102,410,645
  102,412,744
  102,421,548
  102,423,714
  102,425,778
  102,426,164
  102,426,721
  102,429,521
  102,429,524
  102,433,765
  102,433,975
  102,434,715
  102,435,658
  102,435,924
  102,435,963
  102,436,638
  102,437,505
  102,437,745
  102,437,772
  102,438,424
  102,438,471
  102,438,872
  102,439,630
  102,440,154
  102,440,844
  102,441,609
  102,441,664
  102,441,690
  102,441,873
  102,442,071
  102,442,225
  102,443,174
  102,443,322
  102,444,293
  102,445,466
  102,446,106
  102,446,487
  102,447,013
  102,447,813
  102,447,829
  102,448,816
  102,449,275
  102,450,245
  102,451,138
  102,451,139
  102,451,273
  102,452,542
  102,453,279
  102,453,346
  102,453,350
  102,454,264
  102,454,478
  102,454,573
  102,454,817
  102,454,941
  102,455,557
  102,456,044
  102,456,045
  102,456,100
  102,456,118
  102,456,264
  102,457,434
  102,457,713
  102,457,723
  102,459,147
  102,459,399
  102,461,630
  102,462,482
  102,464,031
  102,464,535
  102,464,812
  102,464,881
  102,464,889
  102,465,351
  102,466,151
  102,466,473
  102,466,658
  102,466,794
  102,467,062
  102,467,529
  102,468,671
  102,468,676
  102,468,716
  102,469,300
  102,470,797
  102,509,654
  102,556,948
  102,556,963
  102,560,771
G
C
G
C
G
T
G
C
G
A
T
C
T
T
C
G
G
T
A
T
A
G
A
C
T
T
T
T
G
A
C
T
G
A
A
T
C
G
G
T
G
T
G
C
A
T
G
C
A
C
T
G
G
G
G
T
C
C
T
G
T
T
G
T
C
T
T
T
A
A
T
C
G
G
A
A
A
G
G
A
A
G
G
G
G
C
C
T
A
G
A
G
T
G
T
A
C
C
G
T
T
G
T
T
G
G
T
A
T
C
G
T
T
C
T
G
C
C/T
G/A
C
C
C
A
T
G
G
T
C
C
T
A
T
A
A
A
T
T
A
C
C
G
A
G
A
C
T
A
C
T
T
A
A
C
G
T
A
C
T
G
G
T
C
C
G
C
G
G
T
A
A
A
A
A
C
G
T
G
G
C
G
A
C
G
G
A
C
T
T
T
C
G
G
A
C
T
G
G/C
G/C
G