Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 62,998 (bp)   Positions: 119
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
WN/N (MCW) 
.0
.0
.162
.01
.0
.001
.005
.021
.0
.001
.024
.0
.433
.001
.0
.033
.005
.009
.006
.133
.03
.014
.297
.003
.001
.0
.001
.0
.006
.302
.004
.009
.126
.006
.007
.08
1.0
.001
.001
.992
.091
.052
.005
.0
.069
.024
.011
.009
.001
.019
.055
.0
.0
.008
.0
.022
.0
.006
.0
.402
.0
.017
.004
.003
.002
.002
.0
.209
.001
.041
.08
.039
.02
.004
.001
.006
.016
.281
.193
.038
.939
.008
.655
1.0
.051
.094
.038
.001
.006
.248
.147
.003
.0
.001
.005
.015
--
--
--
.011
.001
.001
.009
.0
.12
.009
.0
.001
.001
.0
.0
.001
.001
.265
.343
.73
.0
.0
.007
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Rffl
Rffl
Rffl
Rffl
Rffl
Rffl
Rffl
Rffl
Rffl
Rffl
Rffl
Rffl
T
T
A
G
G
A
A
G
T
G
T
C
T
C
G
T
C
G
G
C
G
C
G
A
A
C
G
C
T
G
T
C
T
T
T
A
A
T
T
A
C
G
T
G
T
A
A
G
C
G
G
T
C
C
A
A
T
T
C
A
G
C
A
A
C
A
T
G
A
G
T
C
C
T
G
A
A
A
A
C
A
A
G
T
C
C
C
G
C
T
T
T
A
G
T
G
T
A
C
C
A
C
G
T
A
T
G
C
G
C
G
G
C
T
T
G
A
T
T
  70,158,673
  70,158,809
  70,160,791
  70,161,487
  70,162,916
  70,163,506
  70,163,531
  70,164,017
  70,165,077
  70,165,887
  70,165,895
  70,166,028
  70,166,565
  70,167,991
  70,169,869
  70,171,900
  70,174,091
  70,174,237
  70,174,263
  70,174,278
  70,174,299
  70,174,303
  70,175,107
  70,175,599
  70,176,003
  70,176,083
  70,176,526
  70,176,648
  70,176,989
  70,177,823
  70,178,223
  70,178,356
  70,180,718
  70,181,378
  70,182,748
  70,183,330
  70,183,966
  70,184,854
  70,185,386
  70,185,609
  70,186,218
  70,187,130
  70,187,194
  70,188,101
  70,188,480
  70,189,252
  70,189,472
  70,191,849
  70,192,080
  70,193,858
  70,193,941
  70,195,207
  70,195,315
  70,195,418
  70,196,277
  70,196,301
  70,196,481
  70,196,956
  70,197,980
  70,198,109
  70,198,729
  70,199,897
  70,200,069
  70,200,249
  70,200,349
  70,200,523
  70,200,608
  70,201,653
  70,201,827
  70,202,101
  70,202,468
  70,203,286
  70,203,649
  70,203,820
  70,203,881
  70,203,974
  70,204,380
  70,206,314
  70,206,356
  70,206,626
  70,207,164
  70,207,343
  70,207,762
  70,208,434
  70,208,632
  70,208,710
  70,208,877
  70,210,001
  70,210,321
  70,210,395
  70,210,590
  70,210,602
  70,211,032
  70,211,041
  70,211,220
  70,211,396
  70,213,459
  70,213,709
  70,213,922
  70,215,198
  70,215,329
  70,216,686
  70,216,783
  70,216,923
  70,217,176
  70,217,791
  70,218,053
  70,218,150
  70,218,179
  70,218,221
  70,218,267
  70,218,391
  70,219,567
  70,219,871
  70,219,872
  70,219,888
  70,219,984
  70,220,074
  70,220,167
C
G
G
A
T
G
G
T
C
T
C
T
C
A
C
C
A
A
A
T
T
T
A
G
G
T
C
T
C
A
C
T
C
G
C
C
G
C
C
C
T
A
C
A
A
G
G
A
T
A
G/A
G
T
T
G
G
G
C
T
G
T
T
G
G
T
G
C
A
G
A
C
T
A
C
T
G
T
G
T
G
C
G
A
C
G
G
T
T
T
C
A
C
C
A
A
A
C
G
T
T
C
C/T
A
C
G
G
A
G
A
T
C
A
T
G
A
A
G
G
A