Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 164,608 (bp)   Positions: 158
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SHRSP/Gcrc (RGD) 
.001
.014
.46
.003
.003
.004
.112
.444
.016
.487
--
.197
.497
.017
.844
.004
.002
.387
.13
.073
.0
.0
.058
.598
--
.106
.003
.011
.198
.01
.003
.069
.082
.103
.044
.018
.0
.737
.0
.014
.092
.006
.208
.048
.0
.003
.001
.007
.81
.002
.167
.691
.027
.06
.009
.001
.0
.018
.615
.0
.001
.001
.001
.008
.007
.066
.009
.481
.0
.0
.01
.007
.019
.123
.043
.431
.113
.018
.01
.001
.013
.005
.001
.059
.001
.0
.0
.0
.001
.001
.042
.186
.272
.031
.018
.159
.006
.003
.008
--
.005
.002
.0
.0
.004
.0
.011
.012
.003
.003
.065
.13
.001
.005
.059
.022
.018
.001
.0
.064
.0
.001
.003
.004
.0
.0
.001
.095
.2
.999
.217
.048
.026
.001
.02
.001
.0
.998
.157
.004
.159
.0
.029
.0
.002
.002
.176
.003
.0
.0
.001
.032
.101
.0
.087
.011
.052
.006
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
Rapgef6
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
A
G
A
A
T
C
A
G
T
A
G
G
A
G
T
T
A
C
T
C
A
T
A
T
C
G
G
G
A
T
A
T
A
A
C
A
T
C
T
G
T
C
C
C
C
T
T
T
T
C
C
T
A
G
C
T
G
G
T
G
A
T
C
T
C
A
A
T
G
A
A
T
G
T
C
A
C
A
T
A
C
G
T
G
T
G
C
A
C
C
A
C
C
A
A
A
C
A
A
T
A
G
C
C
C
C
C
C
A
C
G
C
G
G
T
G
T
C
G
T
A
T
G
C
C
A
T
G
A
G
G
T
A
C
A
A
G
A
T
C
T
T
G
T
A
C
T
G
G
G
A
T
G
C
T
G
A
  39,875,635
  39,877,085
  39,879,068
  39,880,139
  39,881,075
  39,881,281
  39,882,737
  39,883,406
  39,883,722
  39,884,231
  39,884,727
  39,886,587
  39,887,837
  39,888,538
  39,891,293
  39,891,412
  39,891,567
  39,893,811
  39,894,208
  39,894,269
  39,895,576
  39,896,499
  39,897,578
  39,898,084
  39,903,384
  39,903,798
  39,903,853
  39,904,067
  39,904,781
  39,905,238
  39,905,246
  39,905,271
  39,905,622
  39,905,853
  39,906,064
  39,906,290
  39,907,032
  39,907,629
  39,909,508
  39,911,033
  39,914,085
  39,915,540
  39,916,198
  39,918,496
  39,918,672
  39,918,722
  39,918,947
  39,922,388
  39,924,326
  39,925,120
  39,926,222
  39,927,286
  39,927,944
  39,928,344
  39,932,338
  39,932,730
  39,934,750
  39,937,691
  39,937,826
  39,938,401
  39,939,572
  39,940,375
  39,940,587
  39,940,849
  39,945,901
  39,948,711
  39,948,784
  39,949,599
  39,950,430
  39,954,045
  39,954,078
  39,954,370
  39,956,096
  39,956,107
  39,960,414
  39,960,865
  39,961,584
  39,963,954
  39,963,955
  39,964,140
  39,966,810
  39,969,120
  39,973,193
  39,973,212
  39,973,317
  39,973,794
  39,975,722
  39,977,068
  39,977,119
  39,977,977
  39,978,065
  39,979,177
  39,980,586
  39,980,755
  39,981,469
  39,983,678
  39,985,668
  39,986,439
  39,987,459
  39,990,018
  39,990,760
  39,990,904
  39,992,297
  39,992,792
  39,993,415
  39,995,432
  39,996,103
  39,997,649
  39,999,540
  40,000,221
  40,001,076
  40,002,358
  40,002,661
  40,002,760
  40,002,821
  40,003,708
  40,005,402
  40,006,183
  40,006,938
  40,008,432
  40,008,969
  40,009,874
  40,009,879
  40,011,727
  40,012,019
  40,015,587
  40,015,666
  40,015,815
  40,015,888
  40,016,140
  40,017,000
  40,017,127
  40,017,924
  40,018,111
  40,018,827
  40,019,049
  40,019,406
  40,019,844
  40,023,011
  40,024,722
  40,026,180
  40,027,477
  40,027,528
  40,029,011
  40,029,346
  40,031,949
  40,032,185
  40,032,279
  40,032,531
  40,035,363
  40,035,417
  40,036,455
  40,036,908
  40,037,005
  40,038,102
  40,038,386
  40,039,159
  40,039,696
G
G
A
G
G
C
T
G
C
C
T
T
T
G
A
G
C
C
T
C
T
G
C
G
C
T
A
A
T
G
A
T
C
G
C
T
G
A
G
C
A
G
T
T
T
T
A
C
C
C
T
T
C
C
A
A
C
A
T
C
A
G
G
T
C
A
G
G
C
A
G
G
A
A
C
T
C
T
G
C
C
T
A
G
A
G
A
T
G
G
T
G
A
T
C
C
G
T
G
G
G
C
A
T
T
T
A
T
T
G
T
C
A
A
A
C
A
C
A
A
C
G
G
A
T
G
G
C
A
G
A
A
C
G
T
T
G
C
C
A
T
G
G
A
C
C
T
C
A
A
A
G
G
A
G
C
A
T