Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 97,750 (bp)   Positions: 102
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
HXB2/IpcvMcwi (2019) 
.04
.172
.687
1.0
.997
.0
.001
.001
.011
.0
.03
.062
.002
--
--
--
--
.003
.0
--
--
.161
.088
.081
.0
.031
.609
.981
.003
.0
.001
.55
.177
.467
.15
.245
.321
--
--
.031
.303
.006
.027
.439
.007
.004
.101
--
.222
.252
.03
.244
.05
.148
.002
.547
--
--
--
--
--
.001
.192
.25
.012
.01
.004
.128
.02
--
--
--
--
--
--
--
--
--
.102
.23
.001
.0
.002
--
.006
.002
.0
--
.002
.128
.116
.265
.039
.036
.028
.013
.01
.006
.188
.021
--
.952
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Rad54l2
Rad54l2
Rad54l2
Rad54l2
Rad54l2
Rad54l2
Rad54l2
Rad54l2
Rad54l2
Rad54l2
Rad54l2
C
T
A
-
A
T
A
A
4
-
C
C
A
C
C
C
2
-
T
G
A
C
-
-
-
A
25
A
T
T
8
G
C
-
T
C
G
A
-
2
G
G
G
G
T
C
A
A
-
-
A
-
T
A
A
-
T
T
T
-
A
C
T
-
A
C
G
A
A
G
C
G
-
T
C
G
-
C
A
T
G
G
G
G
C
C
C
G
A
C
-
-
C
A
C
C
G
-
A
-
6
T
  115,393,180
  115,393,906
  115,394,945
  115,395,505
  115,395,668
  115,397,450
  115,398,520
  115,398,834
  115,399,279
  115,399,543
  115,400,647
  115,401,201
  115,401,247
  115,401,551
  115,401,553
  115,401,555
  115,401,566
  115,401,575
  115,401,904
  115,413,608
  115,413,697
  115,413,743
  115,414,093
  115,414,094
  115,414,167
  115,421,002
  115,421,296
  115,421,376
  115,422,612
  115,422,626
  115,423,644
  115,423,890
  115,424,566
  115,426,592
  115,427,262
  115,427,436
  115,427,998
  115,428,824
  115,428,901
  115,428,984
  115,429,036
  115,429,196
  115,430,044
  115,430,467
  115,430,849
  115,431,143
  115,431,651
  115,432,064
  115,432,535
  115,432,540
  115,433,675
  115,433,958
  115,434,519
  115,434,530
  115,435,523
  115,436,038
  115,436,286
  115,436,289
  115,436,330
  115,436,413
  115,436,415
  115,437,434
  115,438,018
  115,438,377
  115,439,168
  115,439,393
  115,439,785
  115,440,202
  115,440,281
  115,441,199
  115,441,225
  115,441,255
  115,441,395
  115,441,429
  115,441,507
  115,441,528
  115,441,530
  115,441,580
  115,441,669
  115,441,894
  115,466,800
  115,466,801
  115,466,816
  115,468,796
  115,468,943
  115,468,945
  115,468,947
  115,471,614
  115,474,441
  115,479,971
  115,479,979
  115,480,862
  115,480,891
  115,480,892
  115,480,912
  115,480,925
  115,480,928
  115,480,938
  115,481,983
  115,485,449
  115,486,166
  115,487,235
G
C
G
G
G
C
T
T
-
-/A
T
T
G
T
T
T
-
4
C
A
-
G
-/3
-/2
A
G
-
G
G
G
-
T
T
20
C
T
T
G
2
-
A
A
A
T
C
G
G
G
A
2
G
2
C
-
G
G
-
-
G
T
T
G
-
T
C
T
-
G
C
A
T
A
C
A
T
C
G
T
T
C
C
A
T
A
G
G
G
A
T
T
C
18
A
G
T
-
-
A
G
A
-
A