Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 651,843 (bp)   Positions: 585
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
--
--
--
.01
.014
.006
.01
.024
.001
.002
.001
.003
.035
.168
.0
.041
.005
.007
.01
.004
.468
.011
.0
.0
.003
.007
.001
.002
.028
.001
.001
.002
.006
.002
.001
.003
.003
.002
.006
.046
.102
.244
.019
.005
.003
.005
.036
.255
.032
.005
.002
.009
.001
.0
.001
.002
.002
.02
.004
.002
.028
.027
.019
.108
.044
.015
.007
.128
.019
.001
.002
.025
.106
.116
.098
.008
.035
.039
.081
.025
.02
.014
.22
.336
.264
.003
.003
.022
.013
.008
.003
.014
.024
.019
.003
.004
.006
.007
.002
.003
.0
.002
.001
.009
.001
.0
.002
.004
.071
.024
.005
.001
.023
.027
.021
.019
.023
.005
.001
.009
.044
.125
.001
.001
.002
.068
.007
.002
.002
.04
.015
.013
.157
.028
.032
.828
.543
.016
.011
.004
.006
.016
.009
.062
.011
.01
.763
.246
.987
.992
.966
.895
.899
.868
.831
.701
.794
.861
.03
.071
.077
.264
.051
.016
.008
.002
.001
.079
.0
.009
.0
.002
.004
.02
--
--
--
.001
.074
.239
.652
.688
.895
.998
.967
.084
.004
.904
.005
.01
.002
.001
.042
.0
.0
.0
.0
.001
.11
.485
.0
.0
.0
.001
.012
.002
.001
.001
.0
.0
.001
.0
.001
.004
.017
.053
.065
.192
.206
.243
.035
.069
.051
.016
.006
.005
.008
.008
.035
.004
.005
.002
.005
.0
.007
.008
.002
.034
.061
.093
.021
.024
.005
.001
.002
.002
.007
.007
.004
.001
.005
.002
.005
.01
.008
.004
.018
.003
.015
.064
.067
.005
.004
.002
.008
.004
.0
.002
.002
.004
.003
.004
.001
.002
.002
.002
.003
.001
.001
.003
.0
.001
.007
.01
.001
.001
.063
.038
.015
.001
.001
.001
.001
.002
.006
.008
.008
.047
.0
.0
.001
.009
.0
.001
.002
.0
.0
.0
.006
.0
.001
.001
.0
.005
.001
.0
.001
.0
.001
.002
.015
.355
.004
.001
.0
.002
.0
.001
.0
.0
.004
.005
.928
.962
--
--
--
--
--
.002
.007
.001
.008
.005
.001
.003
.002
.0
.0
.0
.001
.004
.03
.006
.097
.209
.001
.009
.001
.002
.004
.001
.015
.0
.022
.041
.016
.022
.001
.001
.001
.003
.0
.001
.016
.016
.025
.07
.004
.003
.003
.017
.034
.161
.094
.095
.069
.045
.103
.232
.321
.033
.009
.003
.003
.003
.002
.001
.0
.001
.008
--
--
--
.065
.001
.001
.006
.008
.005
--
--
--
--
--
--
--
--
--
--
1.0
.991
.998
.083
.003
.154
.004
.0
--
--
--
.001
.0
.003
.015
.013
.009
.0
.002
.284
.001
.0
.239
.021
.164
.361
.018
.041
.072
.003
.135
.098
.256
.296
.272
.271
.781
.23
.209
.045
.05
.005
.017
.035
.038
.158
.009
.009
.01
.001
.001
.002
.012
.012
.001
.001
.01
.038
.031
.009
.01
.014
.01
.006
.002
.003
.023
.004
.0
.002
.001
.003
.005
.001
.007
.003
.003
.049
.116
.003
.002
.539
.053
.009
.02
.006
.016
.017
.013
.002
.005
.037
--
--
.824
.738
.001
.004
.051
.416
.042
.0
.001
.224
.187
.0
.084
.043
.0
--
--
--
--
--
--
--
--
--
--
.113
.002
.0
.003
.0
.0
.005
.004
.364
.0
.0
.002
.021
.001
.001
.001
.034
.004
.014
.0
.002
.021
.001
.001
.008
.001
.008
.039
.064
.006
.007
.002
.002
--
--
--
--
.071
.069
.098
.07
.043
.116
.042
.036
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
Ptprd
C
G
2
G
-
G
-
-
A
G
-
A
A
G
T
A
2
C
2
T
T
T
A
C
C
C
C
-
G
2
G
G
G
G
C
-
C
G
-
2
G
T
G
-
G
A
-
-
C
-
-
T
-
T
T
A
2
G
T
G
A
2
G
-
A
G
-
-
G
T
2
-
2
2
A
A
T
A
T
A
T
G
G
-
G
G
T
-
G
G
T
-
G
G
-
G
G
-
G
A
-
-
2
G
G
G
-
-
-
C
G
T
C
-
G
C
-
C
T
-
A
-
G
T
G
G
G
G
G
G
G
G
-
G
A
A
-
A
-
2
T
T
T
C
-
G
-
-
T
A
T
C
-
G
T
-
-
G
-
C
-
A
-
A
G
C
-
2
-
G
-
T
-
A
-
3
-
C
G
2
A
T
G
T
C
G
-
G
G
3
-
G
G
G
G
A
-
G
T
C
G
G
G
-
G
G
-
G
-
G
A
-
G
G
G
C
G
A
T
T
G
G
2
G
T
C
-
2
-
G
G
C
G
G
G
-
2
G
2
G
-
G
-
4
-
G
G
2
C
G
2
G
G
T
G
G
-
2
G
G
G
T
G
3
A
2
-
-
-
-
C
G
C
G
-
C
-
G
2
-
G
-
G
C
C
C
-
G
A
G
-
-
-
-
-
-
-
T
T
C
-
T
G
-
-
G
-
T
-
-
-
-
G
-
-
-
2
-
4
3
7
-
-
A
-
A
G
G
G
G
G
-
-
G
T
T
G
A
G
-
-
G
-
-
G
-
-
C
-
C
2
-
-
-
G
T
-
-
C
-
T
-
-
-
-
-
-
-
-
A
C
-
-
T
T
G
A
-
A
-
A
-
-
-
G
-
G
G
A
G
-
-
3
C
T
C
3
-
C
C
C
C
2
G
A
-
A
T
-
T
G
A
T
T
T
2
G
G
A
C
2
G
-
T
-
T
-
G
C
T
C
A
G
3
-
A
G
3
3
3
-
A
A
A
G
A
A
C
2
G
G
G
A
G
C
G
G
A
C
T
A
T
2
-
-
-
T
-
G
G
T
T
C
G
A
T
G
A
2
A
G
T
G
T
C
-
-
-
2
C
G
G
A
3
2
G
G
-
G
4
A
A
-
C
-
2
-
-
C
-
-
-
G
T
-
-
C
2
G
4
T
-
-
-
9
G
-
G
A
C
C
-
G
A
A
-
A
A
T
-
-
C
A
-
A
A
-
4
C
-
C
A
-
T
2
C
-
T
4
-
C
T
T
C
G
G
G
T
G
G
G
T
G
G
C
G
2
A
A
T
2
C
A
-
T
  92,882,075
  92,882,154
  92,882,159
  92,882,191
  92,882,199
  92,882,266
  92,882,271
  92,882,340
  92,898,961
  92,898,963
  92,899,036
  92,899,116
  92,899,137
  92,899,145
  92,899,217
  92,899,250
  92,899,290
  92,899,331
  92,937,057
  92,954,651
  92,967,364
  92,969,996
  92,970,003
  92,970,005
  92,970,008
  92,970,013
  92,970,027
  92,970,031
  92,970,035
  92,970,049
  92,996,453
  92,996,457
  92,996,463
  92,996,466
  92,996,469
  92,996,471
  92,996,474
  92,996,476
  92,996,480
  92,996,485
  92,996,493
  92,996,527
  92,996,535
  92,996,543
  92,996,549
  92,996,557
  92,996,560
  92,996,570
  92,996,584
  92,996,598
  92,996,609
  92,996,620
  92,996,632
  92,996,639
  92,996,647
  92,996,649
  92,996,656
  92,996,661
  92,996,683
  92,996,684
  92,996,694
  92,996,710
  92,996,744
  92,996,754
  92,996,760
  92,996,763
  92,996,780
  92,996,787
  92,996,836
  92,996,863
  92,996,867
  92,996,876
  92,996,885
  92,996,891
  92,996,894
  92,996,909
  92,996,918
  92,996,921
  92,996,926
  92,996,944
  92,996,945
  92,996,954
  92,996,964
  92,996,970
  92,996,980
  92,997,017
  92,997,018
  92,997,025
  92,997,030
  92,997,052
  92,997,055
  92,997,058
  92,997,065
  92,997,069
  92,997,075
  92,997,076
  92,997,084
  92,997,093
  92,997,108
  92,997,118
  92,997,122
  92,997,131
  92,997,150
  92,997,154
  92,997,164
  92,997,167
  92,997,179
  92,997,180
  92,997,205
  92,997,212
  92,997,226
  92,997,246
  92,997,265
  92,997,273
  92,997,276
  92,997,291
  92,997,299
  92,997,338
  92,997,347
  92,997,378
  92,997,393
  92,997,411
  92,997,420
  92,997,428
  92,997,429
  92,997,436
  92,997,453
  92,997,462
  92,997,464
  92,997,473
  92,997,480
  92,997,493
  92,997,505
  92,997,516
  92,997,517
  92,997,548
  92,997,567
  92,997,587
  92,997,606
  92,997,609
  92,997,617
  92,997,623
  92,997,629
  92,997,635
  92,997,641
  92,997,645
  92,997,657
  92,997,664
  92,997,739
  92,997,742
  92,997,758
  92,997,765
  92,997,782
  92,997,784
  92,997,787
  92,997,796
  92,997,806
  92,997,813
  92,997,833
  92,997,844
  92,997,850
  92,997,858
  92,997,896
  92,997,935
  92,997,952
  92,997,953
  92,997,966
  92,998,001
  92,998,060
  92,998,065
  92,998,135
  92,998,146
  92,998,168
  92,998,236
  92,998,268
  92,998,275
  92,998,288
  92,998,784
  92,998,794
  92,998,797
  92,998,805
  92,998,816
  92,998,824
  92,998,830
  92,998,845
  92,998,874
  92,998,880
  92,998,908
  92,998,926
  92,998,938
  92,998,944
  92,998,945
  92,998,968
  92,998,977
  92,998,983
  92,998,991
  92,998,995
  92,999,006
  92,999,040
  92,999,048
  92,999,484
  92,999,489
  92,999,496
  92,999,504
  92,999,520
  92,999,532
  92,999,538
  92,999,553
  92,999,559
  92,999,564
  92,999,566
  92,999,589
  92,999,593
  92,999,608
  92,999,613
  92,999,643
  92,999,644
  92,999,650
  92,999,654
  92,999,667
  92,999,676
  92,999,702
  92,999,711
  92,999,717
  92,999,721
  92,999,722
  92,999,729
  92,999,730
  92,999,742
  92,999,753
  92,999,760
  92,999,769
  92,999,772
  92,999,781
  92,999,785
  92,999,920
  92,999,927
  92,999,936
  92,999,958
  92,999,964
  92,999,976
  93,000,344
  93,000,349
  93,000,354
  93,000,360
  93,000,361
  93,000,365
  93,000,368
  93,000,373
  93,000,375
  93,000,429
  93,000,444
  93,000,448
  93,000,456
  93,000,457
  93,000,459
  93,000,477
  93,000,486
  93,000,500
  93,000,516
  93,000,573
  93,000,582
  93,000,583
  93,000,591
  93,000,597
  93,000,602
  93,000,612
  93,000,631
  93,000,645
  93,000,651
  93,000,659
  93,000,661
  93,000,671
  93,000,676
  93,000,679
  93,000,688
  93,000,691
  93,000,698
  93,000,705
  93,000,710
  93,000,720
  93,000,726
  93,000,768
  93,000,785
  93,000,792
  93,000,796
  93,000,831
  93,000,836
  93,000,839
  93,000,863
  93,000,891
  93,000,899
  93,000,902
  93,000,905
  93,000,933
  93,000,934
  93,000,976
  93,000,994
  93,001,009
  93,001,010
  93,001,016
  93,001,031
  93,001,039
  93,001,044
  93,001,046
  93,001,079
  93,001,082
  93,001,084
  93,001,090
  93,001,107
  93,001,109
  93,001,121
  93,001,157
  93,001,266
  93,001,269
  93,001,273
  93,001,275
  93,001,279
  93,001,283
  93,001,289
  93,001,295
  93,002,861
  93,002,992
  93,002,999
  93,003,003
  93,003,015
  93,003,026
  93,007,926
  93,007,944
  93,007,949
  93,008,101
  93,008,105
  93,015,875
  93,015,877
  93,033,871
  93,033,949
  93,033,980
  93,033,995
  93,034,450
  93,045,910
  93,071,857
  93,071,881
  93,071,901
  93,071,929
  93,071,981
  93,072,083
  93,072,093
  93,072,097
  93,072,124
  93,072,184
  93,072,290
  93,072,347
  93,072,381
  93,074,851
  93,079,696
  93,079,779
  93,079,834
  93,083,754
  93,083,899
  93,083,922
  93,084,017
  93,084,045
  93,084,055
  93,084,103
  93,084,127
  93,084,134
  93,084,286
  93,084,338
  93,084,347
  93,084,373
  93,084,374
  93,084,379
  93,084,395
  93,084,399
  93,084,416
  93,084,417
  93,084,433
  93,084,445
  93,084,453
  93,084,457
  93,084,466
  93,084,508
  93,084,562
  93,084,599
  93,089,037
  93,089,042
  93,089,059
  93,089,063
  93,089,074
  93,089,079
  93,089,095
  93,089,113
  93,095,174
  93,095,213
  93,095,214
  93,095,221
  93,095,226
  93,095,237
  93,095,240
  93,095,246
  93,095,300
  93,104,232
  93,104,235
  93,104,336
  93,104,403
  93,104,473
  93,104,491
  93,104,533
  93,104,545
  93,104,637
  93,104,848
  93,104,912
  93,104,913
  93,104,927
  93,104,928
  93,104,931
  93,104,959
  93,104,968
  93,104,973
  93,104,990
  93,116,687
  93,116,691
  93,116,693
  93,117,301
  93,123,545
  93,123,808
  93,142,374
  93,142,439
  93,143,221
  93,143,334
  93,143,360
  93,144,270
  93,144,271
  93,144,289
  93,144,315
  93,144,323
  93,144,325
  93,144,339
  93,144,363
  93,144,376
  93,144,394
  93,144,397
  93,144,413
  93,144,437
  93,144,494
  93,144,501
  93,144,532
  93,144,562
  93,144,569
  93,144,575
  93,251,813
  93,251,817
  93,251,820
  93,251,838
  93,251,871
  93,251,873
  93,251,935
  93,251,974
  93,251,975
  93,252,005
  93,252,021
  93,252,033
  93,252,134
  93,252,149
  93,252,175
  93,252,184
  93,252,197
  93,252,203
  93,252,208
  93,252,212
  93,252,219
  93,252,225
  93,252,232
  93,252,233
  93,252,247
  93,252,248
  93,252,262
  93,252,284
  93,252,288
  93,252,295
  93,252,297
  93,252,300
  93,252,307
  93,252,314
  93,252,333
  93,252,337
  93,252,341
  93,252,351
  93,252,357
  93,252,366
  93,252,369
  93,252,372
  93,252,381
  93,252,389
  93,252,394
  93,252,401
  93,252,410
  93,252,418
  93,252,424
  93,281,828
  93,281,832
  93,281,853
  93,281,891
  93,281,896
  93,281,899
  93,281,931
  93,281,935
  93,281,944
  93,281,954
  93,282,012
  93,282,025
  93,282,035
  93,282,051
  93,282,057
  93,282,109
  93,282,125
  93,282,412
  93,282,419
  93,282,437
  93,282,461
  93,282,476
  93,282,497
  93,282,500
  93,282,509
  93,282,512
  93,308,147
  93,322,212
  93,328,302
  93,346,971
  93,348,292
  93,348,300
  93,348,337
  93,348,346
  93,348,367
  93,348,434
  93,348,463
  93,348,468
  93,348,473
  93,348,515
  93,397,239
  93,404,258
  93,404,261
  93,404,263
  93,404,268
  93,404,284
  93,405,805
  93,405,817
  93,405,920
  93,436,393
  93,436,404
  93,436,415
  93,436,453
  93,436,510
  93,436,522
  93,436,641
  93,436,651
  93,436,702
  93,436,774
  93,436,780
  93,436,788
  93,452,023
  93,452,032
  93,452,040
  93,452,052
  93,452,063
  93,452,089
  93,452,097
  93,452,102
  93,452,167
  93,452,173
  93,452,251
  93,452,252
  93,454,925
  93,454,928
  93,454,931
  93,454,952
  93,454,984
  93,455,016
  93,455,027
  93,455,063
  93,455,070
  93,455,095
  93,455,109
  93,455,123
  93,499,819
-
C
-
-
A
-
C
A
G
A
G
-
-
-
-
-
-
-
2/-
-
-
G
T
-
-
-
-
T
T
-
-
-
-
C
T
T
-
T
T
-
-
-
T
G
T
-
A
G
-
T
T
-
G
-
-
G
-
A
G
T
-
-
-
T
G
A
C
G
-
-
-
T
-
-
G
-
-
-
-
T
G
T
-
T
T
T
G
A
-
-
-
A
-
-
T
A
-
A
-
-
G
T
-
-
-
-
T
T
T
-
-
-
G
3
-
G
T
-
-
A
-
2
-
G
C
T
-
-
-
-
-
-
T
-
T
-
T
-
G
-
-
-
C
-
C
-
T
C
-
-
-
-
C
-
-
T
G
-
2
-
T
-
C
-
C
G
T
-
T
-
T
-
C
-
A
-
G
-
-
-
-
-
-
-
-
-
T
A
-
-
2
C
-
-
T
G
T
-
G
-
-
-
T
2
-
-
T
-
G
-
-
C
C
-
C
G
C
-
G
-
T
C
-
C
C
T
T
-
T
-
T
-
-
-
T
T
-
-
-
-
T/T
-
T
-
T
T
-
-
-
-
-
-
T
G
T
T
A
-
-
-
-
A
T
-
-
-
T
T
2
C
T
-
T
-
G
-
T
T
-
3
-
G
-
-
-
-
G
T
-
-
T
G
T
G
T
T
T
-
C
T
T
-
T
T
C
-
T
-
T
T
T
T
-
4/C
6
4
-
7
-
-
-
A
A
-
T
G
T
T
A
C
T
T/A
T
-
T/C
T/A
G/C
A/C
G/T
4
G
-
T
C
T
G
A
T
T
-
-
T
A
C
-
A
G
A
-
2
-
3
G
A
T
A
A
A
C
C
A
A
2
A
G
C
C
A
-
A
-
A
T
A
-
G
-
-
-
-
T
T
3/-
T
C
T
-
2
-
A
-
-
-
-
-
T
-
-
T
-
-
T
C
-
G
-
-
-
-
-
-
T
2
G
T
A
3
T
-
-
-
G
A
-
C
-
T
-
-
-
A
-
-
-
-
-
-
-
-
-
-
-
-
A
G
-
-
C
A
-
-
-
-
T
T
C
-
A
-
-
-
-
A
T
C
A
T
-
-
-
T
-
C
-
-
A
2
C
-
A
-
-
-
-
-
T
C
A
-
-
G
-
A
-
2
-
3
G
-
G
G
T
T
-
C
T
-
-
-
-
-
G
G
C
-
-
55
A
-
-
-
G
-
-
G
G
-
-
A
15
A
G
G
G
G
-
C
-
-
G
-
C
A
-
-
-
T
T/-
4/-
C
-
-
-
-
G/-
-
-
-
-
-
-
A
T
C
-
-
-
-
C
-
-
-
-
G
T/C