Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 48,283 (bp)   Positions: 127
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
FHH/EurMcwi (MCW) 
.001
.894
.001
--
--
--
--
.293
.024
.005
.0
.006
.0
.996
1.0
.001
.006
.01
.035
--
--
--
.657
.213
.999
.977
.023
.008
.094
.002
.002
.001
.001
.002
.05
.002
.001
.002
.313
.166
.039
.017
.001
.008
.001
.002
.0
.006
.052
.574
.001
.0
.0
.003
.001
.53
.455
.307
.002
.001
.042
.0
.024
.033
.012
.0
.009
--
.004
.191
.041
.0
.009
.001
.57
.001
.0
.001
.002
.0
.51
.301
.056
.283
.0
.0
.0
.02
.008
.006
--
--
--
.021
.054
.546
--
--
.018
.432
.002
.025
.001
--
.062
.007
.01
.027
.001
.02
.991
.021
.019
.347
.551
.0
.001
.004
.028
.047
.001
.0
.998
1.0
.028
.001
.009
Ptpn22
Ptpn22
Ptpn22
Ptpn22
Ptpn22
Ptpn22
Ptpn22
Ptpn22
Ptpn22
Ptpn22
Ptpn22
Ptpn22
Ptpn22
--
--
--
--
--
--
--
--
--
--
--
--
--
Rpl36a-ps15
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
G
C
C
T
G
T
G
A
A
C
C
G
C
T
T
C
T
C
G
G
C
G
G
T
T
G
C
T
C
T
C
T
G
A
A
C
G
A
A
A
A
C
T
T
G
G
C
G
T
G
C
T
A
A
G
A
T
C
T
T
G
T
T
T
T
C
T
T
T
G
G
C
T
G
C
G
A
T
C
T
G
A
T
G
T
T
C
G
G
G
C
C
G
G
A
A
G
C
C
G
G
C
T
C
A
G
C
A
G
A
A
T
G
C
T
A
T
G
A
A
C
A
T
A
A
G
  206,342,973
  206,344,557
  206,345,271
  206,346,537
  206,346,538
  206,346,546
  206,346,725
  206,347,009
  206,347,129
  206,347,304
  206,348,140
  206,348,334
  206,348,358
  206,348,860
  206,348,998
  206,349,192
  206,349,295
  206,349,550
  206,349,849
  206,350,399
  206,350,408
  206,350,442
  206,350,494
  206,351,006
  206,351,506
  206,351,640
  206,352,264
  206,352,325
  206,352,377
  206,352,462
  206,352,508
  206,352,814
  206,352,964
  206,353,040
  206,353,604
  206,353,826
  206,354,026
  206,354,444
  206,354,544
  206,354,628
  206,354,710
  206,355,325
  206,355,797
  206,355,978
  206,356,031
  206,356,225
  206,356,350
  206,356,709
  206,356,864
  206,356,924
  206,357,068
  206,358,572
  206,359,085
  206,359,190
  206,359,559
  206,359,577
  206,359,584
  206,359,595
  206,359,666
  206,359,676
  206,359,842
  206,359,880
  206,360,167
  206,360,170
  206,360,179
  206,360,251
  206,360,323
  206,360,344
  206,360,359
  206,360,405
  206,360,530
  206,360,918
  206,360,983
  206,361,284
  206,364,371
  206,364,873
  206,365,157
  206,365,172
  206,365,950
  206,366,084
  206,366,177
  206,366,567
  206,366,570
  206,367,147
  206,368,627
  206,369,866
  206,370,003
  206,370,440
  206,372,238
  206,372,254
  206,372,858
  206,372,859
  206,373,038
  206,374,439
  206,374,610
  206,376,160
  206,376,290
  206,376,616
  206,377,593
  206,377,669
  206,377,814
  206,378,605
  206,378,631
  206,378,849
  206,378,955
  206,379,926
  206,380,149
  206,380,290
  206,380,958
  206,384,266
  206,384,462
  206,384,663
  206,384,943
  206,385,176
  206,385,989
  206,386,389
  206,386,721
  206,388,100
  206,388,197
  206,388,230
  206,388,651
  206,388,860
  206,388,971
  206,389,041
  206,389,825
  206,389,857
  206,390,302
G
A
T
A
G
A
C
C
G
G
T
G
A
T
C
C
T
C
T
T
A
T
A
A
C
C
T
T
C
T
G
A
C
A
T
G
T
A
G
C
G
G
T
G
C
T
A
T
A
A
A
G
C
C
T
A
G
C
T
C
C
A
T/C
C
T/C
C
C/G
C
C
C
A
A
A
C
T
T
A
G
C
T
C
A
G
C
A
C
A
T
A
A
T
T
C/G
C
A
G
C
A
A
T
T
A
A
C
T
C
A
T
G
A
C
G
T/A
C
A
C
G
C
A
G
G
T
T
G
C
C
C