Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 25,575 (bp)   Positions: 129
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
ACI/N (2020) 
.007
.002
.003
.163
.001
.004
.019
.002
.013
.001
.07
.0
.003
.003
.002
.004
.012
.004
.023
.022
.003
.01
.38
.021
.017
.004
.035
.668
.919
.008
.002
.019
.207
.969
.071
.105
.007
.47
.0
.0
.0
.019
.0
.001
.019
.004
.007
.135
.072
.002
.257
.226
.184
.141
.096
.014
.002
.01
.004
.003
.003
.001
.177
.01
.0
.001
.0
.006
.002
.0
.002
.005
.024
.001
.001
.002
.0
.0
.001
.0
.0
.0
.0
.0
.0
.0
.0
.009
.085
.0
.0
.008
.003
.005
.003
.0
.015
.002
.017
.007
.005
.001
.003
.001
.057
.001
.107
.0
1.0
1.0
.0
.007
.002
.047
.0
.005
.011
.0
.0
.006
.0
.006
.002
.0
.0
.0
.0
.003
.014
Psap
Psap
Psap
Psap
Psap
Psap
Psap
Psap
Psap
Psap
Psap
Psap
Psap
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
G
A
G
4
G
T
T
C
C
T
13
-
A
-
C
C
T
A
T
T
C
A
16
T
-
G
A
A
A
T
T
T
G
C
G
T
C
T
T
G
C
C
-
A
C
C
C
36
C
-
G
G
G
G
C
G
G
C
A
G
T
C
-
T
G
A
11
A
C
C
C
G
G
G
G
T
C
G
G
C
G
2
A
G
A
G
G
G
-
T
C
-
A
C
2
T
C
C
A
C
G
A
C
T
2
C
3
T
T
T
G
5
A
G
3
G
G
G
T
-
T
T
A
C
A
T
A
A
  29,831,307
  29,831,314
  29,831,476
  29,832,402
  29,833,973
  29,834,979
  29,835,627
  29,836,080
  29,836,276
  29,836,319
  29,836,361
  29,836,430
  29,836,477
  29,836,478
  29,836,503
  29,836,542
  29,836,546
  29,836,565
  29,836,573
  29,836,574
  29,836,612
  29,836,618
  29,836,879
  29,837,107
  29,837,244
  29,837,517
  29,837,639
  29,837,782
  29,838,391
  29,838,650
  29,838,750
  29,838,786
  29,839,149
  29,839,200
  29,839,272
  29,839,340
  29,839,404
  29,839,868
  29,840,256
  29,840,600
  29,840,824
  29,840,934
  29,841,208
  29,841,252
  29,842,197
  29,842,450
  29,842,775
  29,842,801
  29,842,810
  29,843,017
  29,843,516
  29,843,519
  29,843,523
  29,843,527
  29,843,531
  29,844,699
  29,845,450
  29,845,783
  29,845,983
  29,845,984
  29,845,994
  29,845,995
  29,846,093
  29,846,150
  29,846,236
  29,846,264
  29,846,353
  29,846,508
  29,846,661
  29,847,010
  29,847,405
  29,847,430
  29,847,534
  29,847,688
  29,847,764
  29,847,777
  29,847,820
  29,847,851
  29,847,966
  29,848,021
  29,848,049
  29,848,164
  29,848,222
  29,848,235
  29,848,246
  29,848,291
  29,848,320
  29,848,569
  29,848,639
  29,848,667
  29,848,721
  29,848,930
  29,848,960
  29,849,032
  29,849,093
  29,849,330
  29,849,576
  29,849,607
  29,849,821
  29,849,982
  29,850,122
  29,850,493
  29,850,552
  29,850,566
  29,850,600
  29,850,641
  29,850,669
  29,851,053
  29,851,103
  29,851,147
  29,851,460
  29,851,578
  29,851,674
  29,851,780
  29,851,945
  29,852,325
  29,852,361
  29,853,696
  29,853,715
  29,853,855
  29,854,001
  29,854,260
  29,854,737
  29,854,767
  29,855,158
  29,855,429
  29,855,718
  29,855,894
  29,856,648
T
A
G
A
-
A
C
A
T
T
C
-
3
G
8
T
T
C
G
C
C
T
C
-
C
5
A
-
G
G
G
C
C
T
G
-
C
T
C
C
A
A
G
2
C
T
T
G
-
T
2
A
A
A
A
G
A
C
A
G
T
C
T
A
A
A
C
-
G
C/T
-
T
A
A
T
C
C
-
-
A
T
A
-
G
A
G
A
T
A
22
C
G
2
G
T
-
C
T
T
T
T
A
C
T
C
-
T
-
C
C
C
A
-
G
T
-
C
A
A
C
4
C
G
G
T
C
C
G
G