Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 96,496 (bp)   Positions: 211
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SBH/Ygl (MCW) 
.008
.599
.395
.001
.0
.0
.289
.458
.0
.0
.0
.0
.191
.344
.007
.001
--
--
--
.012
.222
.001
.0
.0
.0
.003
1.0
.011
.0
.03
.046
.002
.0
.0
.001
.0
.001
.009
.001
.0
.0
.0
.016
.002
.002
.002
.001
.001
.003
.001
.129
.007
.03
.034
.049
.075
.0
.014
.051
.001
.027
.039
.031
.0
.001
.0
.0
.003
.0
.0
.0
.04
.001
.001
.045
.021
.036
.026
.015
.014
.004
.001
--
--
.0
.031
.002
.0
.0
.001
.8
.0
.0
.08
.01
.732
.0
1.0
.001
.001
.001
.022
.006
.081
.002
--
.013
.004
.0
.231
.017
.002
.026
.002
.001
.0
.002
.0
.002
.003
.0
.0
.001
.837
.638
.395
.087
.014
.132
.502
.055
.254
1.0
.996
.027
.004
.001
.01
.001
.001
.004
.915
.809
.0
.001
.0
.147
.001
.001
.003
.0
.0
.001
.048
.0
.0
.002
.0
.0
.004
.16
.0
.059
.006
.001
.151
.018
.0
.0
.003
.002
.0
.004
.03
.001
.01
.0
.004
.0
.0
.0
.0
.001
.0
.0
.0
.0
.042
--
--
--
.0
.0
.0
--
--
--
.001
.0
.0
.019
.184
.103
.001
.0
.002
.032
.002
.235
.175
.003
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
Prkg2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
C
C
A
T
C
G
G
A
G
A
A
T
T
T
T
A
G
A
G
T
G
T
A
T
C
C
C
G
G
C
A
C
T
C
A
T
T
T
C
T
G
C
T
G
C
G
T
G
A
G
A
T
T
G
T
A
T
G
T
A
A
C
T
G
G
T
A
A
C
T
A
A
T
C
C
C
C
C
A
T
C
G
C
C
T
A
C
G
C
A
C
A
C
G
A
T
G
G
G
A
G
T
T
T
G
T
G
A
G
T
C
T
G
A
G
T
T
G
G
A
G
G
A
G
G
C
A
G
T
G
A
C
C
A
G
G
C
C
T
C
T
T
A
C
T
C
A
A
T
G
A
T
C
T
T
A
A
T
C
G
G
G
C
G
A
C
G
G
G
A
C
G
G
G
G
C
G
C
A
G
C
G
T
A
G
A
C
G
G
C
G
A
A
G
C
A
C
G
A
C
G
C
G
G
A
G
G
C
T
G
  12,217,290
  12,217,368
  12,217,490
  12,217,781
  12,217,849
  12,218,069
  12,218,228
  12,218,738
  12,219,275
  12,219,397
  12,219,567
  12,219,572
  12,220,344
  12,220,603
  12,220,754
  12,221,012
  12,221,047
  12,221,074
  12,221,212
  12,221,250
  12,221,293
  12,221,869
  12,222,248
  12,222,395
  12,222,544
  12,222,621
  12,224,565
  12,224,734
  12,225,248
  12,225,323
  12,225,333
  12,225,385
  12,225,589
  12,225,594
  12,225,631
  12,225,719
  12,225,942
  12,226,038
  12,226,082
  12,226,089
  12,226,227
  12,226,234
  12,226,268
  12,226,378
  12,226,379
  12,226,437
  12,226,466
  12,226,468
  12,226,648
  12,226,684
  12,226,844
  12,227,737
  12,227,840
  12,227,859
  12,227,863
  12,227,888
  12,228,053
  12,228,111
  12,228,598
  12,229,627
  12,229,869
  12,230,166
  12,230,401
  12,230,760
  12,230,764
  12,231,101
  12,231,254
  12,231,292
  12,231,899
  12,232,135
  12,232,181
  12,232,445
  12,232,898
  12,232,954
  12,234,341
  12,235,347
  12,235,365
  12,235,380
  12,235,390
  12,235,391
  12,237,478
  12,239,495
  12,239,681
  12,239,706
  12,243,026
  12,243,209
  12,243,282
  12,243,341
  12,243,349
  12,243,351
  12,243,880
  12,244,519
  12,244,907
  12,244,994
  12,245,731
  12,247,836
  12,247,918
  12,248,053
  12,248,383
  12,248,466
  12,248,477
  12,248,542
  12,248,682
  12,248,971
  12,249,012
  12,252,387
  12,255,860
  12,255,871
  12,255,993
  12,256,321
  12,256,471
  12,256,513
  12,256,591
  12,256,969
  12,257,252
  12,257,261
  12,257,369
  12,257,516
  12,257,704
  12,257,763
  12,257,775
  12,257,850
  12,258,376
  12,258,398
  12,258,405
  12,258,407
  12,258,519
  12,258,798
  12,258,914
  12,259,080
  12,259,331
  12,259,430
  12,259,632
  12,259,714
  12,260,057
  12,260,331
  12,260,341
  12,260,394
  12,260,402
  12,260,411
  12,260,718
  12,262,419
  12,262,527
  12,262,637
  12,262,820
  12,263,112
  12,263,572
  12,263,661
  12,263,672
  12,263,720
  12,263,743
  12,263,797
  12,263,833
  12,263,844
  12,263,875
  12,263,876
  12,263,893
  12,263,937
  12,264,116
  12,264,146
  12,264,187
  12,264,217
  12,264,230
  12,264,320
  12,264,342
  12,264,481
  12,264,709
  12,264,803
  12,264,875
  12,265,632
  12,265,815
  12,265,883
  12,265,986
  12,266,087
  12,266,797
  12,267,570
  12,267,631
  12,267,836
  12,268,116
  12,268,436
  12,268,495
  12,269,015
  12,269,268
  12,269,576
  12,269,602
  12,269,606
  12,269,794
  12,270,220
  12,270,479
  12,270,550
  12,270,869
  12,271,087
  12,271,088
  12,271,261
  12,271,353
  12,271,456
  12,271,457
  12,272,827
  12,273,009
  12,273,821
  12,274,077
  12,274,107
  12,274,192
  12,274,605
  12,274,673
  12,274,801
  12,289,582
  12,289,662
  12,295,321
  12,310,616
  12,311,237
T
A
T
G
G
T
A
A
G
A
G
G
C
C
C
C
C
A
G
A
G
A
C
G
C
G
T
T
T
A
T
T
T
C
T
G
C
C
C
T
A
A
T
C
A
T
A
C
A
G
A
G
C
G
A
C
T
C
A
G
G
G
T
A
T
A
C
G
G
T
C
G
G
C
T
G
T
T
T
G
A
T
C
G
G
C
G
T
C
T
G
G
G
T
A
G
C
A
A
A
G
A
C
C
C
G/T
C
C
G
A
C
T
C
C
T
A
C
C
A
C
G
A
T
G
A
A
T
G
A
C
A
G
T
G
G
A
C
T
T
C
T
C
C
G
T
C
T
T
T
C
A
G
C
T
C
C
C
G
C
T
T
T
C
T
A
G
T
A
A
A
T
T
A
A
T
A
T
T
T
G
A
T
T
C
G
A
G
T
T
C
T
C
C
G
G/A
T
T
T
A
G
T
T
T
T
A
G
A
A
T
C
G/A