Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 17,729 (bp)   Positions: 126
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
LL/MavRrrcAek (2020) 
.762
.001
.005
.0
.0
.001
.0
.003
.001
.003
.001
.004
.001
.009
.012
.018
.011
.031
.041
.119
.0
.0
.005
.017
.095
.268
.384
.034
.012
.011
.006
.014
.253
.156
.09
.033
.134
.004
.001
.003
.003
.248
.618
.845
.919
.137
.001
.025
.0
.0
.0
.842
.014
.001
.006
--
--
--
.352
.312
.007
.197
.002
.001
.001
.004
.004
.008
.022
.017
.029
.018
.015
.001
.001
.012
.016
.009
.002
.001
.001
.006
.0
.0
.013
.0
.016
.003
.043
.047
.021
.142
.001
.116
.064
.005
.011
.007
.001
.03
.022
.035
.006
.005
.083
.058
.006
.001
.094
.0
.001
.002
.037
.011
.009
.0
.0
.201
.064
.002
.003
.057
.02
.018
.05
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
Ppp1cc
T
C
T
G
A
T
G
T
3
G
T
C
T
4
C
C
112
T
A
-
G
C
G
T
T
-
G
-
A
-
G
T
G
-
-
C
A
C
G
-
C
A
-
G
G
-
T
A
C
T
T
T
A
30
A
10
C
2
3
4
G
-
T
-
C
C
C
T
-
G
G
G
G
G
G
G
G
G
G
G
G
C
C
G
G
C
G
C
-
C
T
A
C
T
G
G
2
C
T
A
A
G
T
A
G
T
C
C
-
C
2
A
C
-
T
T
G
G
-
-
-
32
T
A
C
-
  39,865,146
  39,865,613
  39,865,975
  39,866,016
  39,866,078
  39,866,132
  39,866,141
  39,866,167
  39,866,461
  39,866,880
  39,866,984
  39,867,097
  39,867,218
  39,867,296
  39,867,357
  39,867,406
  39,868,400
  39,869,074
  39,869,232
  39,869,264
  39,869,368
  39,869,372
  39,869,377
  39,869,384
  39,869,389
  39,869,393
  39,869,402
  39,869,421
  39,869,442
  39,869,444
  39,869,457
  39,869,475
  39,869,502
  39,869,514
  39,869,519
  39,869,537
  39,869,553
  39,869,566
  39,869,573
  39,869,603
  39,869,606
  39,869,623
  39,869,631
  39,869,642
  39,869,648
  39,869,765
  39,870,115
  39,870,239
  39,870,280
  39,870,677
  39,871,000
  39,871,680
  39,871,799
  39,872,367
  39,872,443
  39,872,564
  39,872,788
  39,872,828
  39,873,087
  39,873,091
  39,873,160
  39,873,708
  39,873,750
  39,873,795
  39,873,796
  39,873,812
  39,873,815
  39,873,818
  39,873,839
  39,873,840
  39,873,851
  39,873,856
  39,873,867
  39,873,871
  39,873,874
  39,873,897
  39,873,909
  39,873,914
  39,873,921
  39,873,934
  39,873,937
  39,873,944
  39,874,150
  39,874,350
  39,874,449
  39,874,710
  39,875,369
  39,875,502
  39,875,625
  39,876,108
  39,876,231
  39,876,389
  39,876,410
  39,876,569
  39,876,585
  39,876,643
  39,876,697
  39,876,801
  39,877,143
  39,877,458
  39,877,489
  39,877,624
  39,877,652
  39,877,653
  39,877,985
  39,878,060
  39,878,098
  39,878,204
  39,878,517
  39,878,640
  39,878,999
  39,879,059
  39,879,333
  39,879,362
  39,879,558
  39,879,761
  39,879,762
  39,879,976
  39,880,044
  39,880,126
  39,880,408
  39,880,455
  39,880,597
  39,880,836
  39,880,898
  39,881,454
A
T
A
A
G
C
T
C
-
A
G
A
C
-
A
T
-
C
G
2
-
-
-
C
C
C
-
A
-
2
-
G
-
A
C
T
-
G
-
T
-
G
C
-
-
2
C
G
T
C
C
C
G
-
G
-
G
-
-
-
A
T
C
G
T
A/A
A
A
G
A
A
C
A
-
C/T
C
C
A
A
A/T
-
A
T
C
T
T
A
G
G
T
G
G
T
C
A
A
-
T
C
G
G
A
G
G
-
C
T
G
3
A
-
G
-
A
A
C
A
A
A
G
3
-
C
-
T
G