Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 23,800 (bp)   Positions: 60
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
LE/Stm (2019) 
.001
.002
.001
.011
.0
.0
.0
.008
.0
.001
.001
.005
.0
.0
.006
.002
.921
.0
.005
.001
.0
.003
.0
.018
.009
.0
.001
.0
.0
.001
.016
.012
.0
.0
.001
.001
.001
.0
.0
.0
.001
.001
.034
.0
.0
.001
.004
.003
.003
.0
.005
.0
.001
.048
.0
.0
.004
1.0
.95
.45
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ppargc1b
Ppargc1b
Ppargc1b
Ppargc1b
Ppargc1b
Ppargc1b
C
A
C
T
C
A
T
G
A
A
-
-
A
T
C
C
C
A
C
T
-
G
-
A
T
G
G
T
T
29
-
G
-
A
C
C
T
C
G
C
A
T
-
G
A
T
G
T
G
C
C
C
C
G
C
T
G
A
G
T
  56,627,112
  56,627,113
  56,627,297
  56,627,339
  56,627,479
  56,627,497
  56,627,655
  56,627,721
  56,627,770
  56,627,775
  56,627,777
  56,627,779
  56,627,812
  56,628,148
  56,628,484
  56,629,018
  56,629,675
  56,629,913
  56,630,289
  56,631,042
  56,631,248
  56,631,325
  56,632,001
  56,632,585
  56,632,619
  56,633,288
  56,633,504
  56,633,866
  56,633,868
  56,633,946
  56,633,977
  56,634,037
  56,634,182
  56,634,440
  56,634,446
  56,634,589
  56,635,423
  56,635,984
  56,636,183
  56,636,374
  56,636,406
  56,640,508
  56,641,507
  56,642,253
  56,643,262
  56,643,304
  56,643,712
  56,645,464
  56,646,209
  56,646,327
  56,647,099
  56,647,165
  56,648,847
  56,648,969
  56,649,115
  56,649,123
  56,650,087
  56,650,378
  56,650,389
  56,650,408
A
G
A
C
T
G
C
A
G
C
2
2
G
G
T
G
T
G
A
C
13
A
A
G
C
T
C
C
C
-
G
A
4
G
T
T
C
G
C
T
G
C
2
A
C
A
A
C
A
T
T
T
T
A
T
C
A
G
A
C