Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 571,736 (bp)   Positions: 558
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
1.0
.0
.0
.004
.002
.0
.001
.014
.0
.852
.161
.0
.001
.029
.001
.0
.0
.005
.004
.002
.001
.0
.022
.006
.018
.001
.0
.0
.001
.014
--
.091
.036
.197
.007
.001
.002
.0
--
.95
.0
.01
.0
.0
.001
.014
.002
.018
.008
.089
.002
.027
--
.0
1.0
.285
.021
.0
.008
.002
.006
.001
.024
.107
.001
.003
.026
.009
.0
.001
.006
.946
.906
.0
.001
.001
.0
.002
.007
.002
.005
.002
.001
.0
.001
.206
.002
.014
.0
.003
.002
.06
.999
.001
.003
.019
.001
.002
.001
.001
--
--
--
--
--
.027
.004
.0
.007
1.0
.001
.0
--
.0
.0
.003
.02
.076
.227
1.0
.995
.802
.0
.047
.001
.0
.0
.0
.006
.0
.011
.085
.0
.002
1.0
.264
.754
.012
.001
.001
--
.044
.014
.452
.02
.04
.013
.009
.243
.0
.001
.001
--
.067
.005
.0
.0
.0
.035
.005
.027
.001
.028
.016
.407
.0
.992
.025
.996
.011
.0
.0
.0
--
--
.023
.522
.047
.039
.002
.0
.017
.002
.005
.0
.002
.002
.005
.002
.405
.003
.0
.001
.003
.002
.633
.0
.001
.0
.029
.008
.009
.374
.001
.578
.46
.0
.016
.011
.005
.094
.174
.72
.0
.013
.0
.399
.0
.659
.869
.06
.0
.0
.0
.065
.0
.0
.001
.001
.002
.0
.0
.001
.016
.003
.001
.001
.0
.0
.052
.916
.997
.996
.004
.067
.168
.45
.015
.076
.0
.998
.009
.001
.688
.042
.0
.002
.003
.003
.003
.074
.121
.031
.0
.0
.01
.0
.003
.006
.001
.0
.001
.001
.004
.0
.204
.0
.008
.001
.002
.003
.001
.095
.017
.001
.0
.0
.001
.003
.042
.002
.002
.0
.0
.028
.139
.005
.0
.0
.0
.001
.002
.002
.001
.062
.002
.0
.0
.0
--
.002
.014
.0
.0
.01
.059
.726
.073
.004
.23
.0
.011
.188
.0
.001
.004
.747
.957
.017
.0
.983
--
--
--
.002
.0
.001
.049
.149
.263
.235
.018
.003
.007
.007
.006
.006
.0
.001
.408
.0
.023
.0
.02
.003
.006
.0
.0
.0
.012
.0
.003
.002
.0
.003
.005
.453
.666
.092
.002
.042
.004
.008
.155
.234
.005
.514
.603
.002
.0
.02
.007
.002
.001
.166
.389
.096
.012
.003
.006
.011
.006
.013
.024
.022
.106
.406
.154
.458
.251
.17
.012
.059
.059
.034
.0
.0
.001
.0
.02
.253
.001
.004
.001
.001
.011
.002
.003
.087
.01
.05
.004
.002
.007
.001
.001
.006
.002
.001
.506
.001
.001
.0
.0
.0
.001
.007
.011
.079
.0
.012
.001
.002
.0
.0
.0
.006
.001
.001
.002
.0
.002
.021
.0
.015
.002
.216
.086
.048
.03
.016
.111
.118
.053
.001
.025
.0
.043
.0
1.0
.001
.0
.003
.008
.01
.064
.0
.011
.1
.017
.004
.12
.026
.003
.004
.0
.003
.003
.001
.01
.004
.0
.005
.0
.001
.0
.001
.005
.001
.008
.007
.304
.001
.0
.0
--
--
--
--
--
.037
.001
.004
--
--
.0
.048
.002
.005
.023
.001
.006
.009
.088
.0
.003
.0
.001
.0
.0
.042
.01
.27
.02
.031
.003
.006
.323
--
.078
.016
.0
.511
.0
.0
.0
.0
.0
.0
.001
.026
.606
.006
.001
.002
.115
.059
.018
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
Pkhd1
A
A
A
A
T
T
T
C
C
T
A
C
A
C
A
C
A
C
A
G
A
A
G
A
G
G
T
A
C
G
G
G
G
A
G
C
A
A
C
T
G
C
G
T
G
G
C
C
A
G
G
A
C
A
C
A
A
C
G
G
T
G
G
A
C
T
C
C
A
A
T
G
A
G
G
T
C
G
C
A
G
C
G
G
G
G
A
G
A
G
G
A
G
A
C
T
T
T
A
A
T
C
T
G
T
T
A
C
A
G
T
A
C
T
A
A
G
A
T
T
C
C
A
T
A
A
T
T
C
C
C
T
T
C
T
G
C
C
G
G
T
A
A
A
T
A
T
C
T
A
T
C
G
A
A
T
A
A
G
C
A
A
T
C
C
A
T
G
T
C
A
T
A
A
T
T
A
T
T
T
C
A
T
C
G
T
C
C
A
C
G
T
A
C
A
A
G
G
G
G
A
A
G
G
T
A
T
C
T
T
T
C
A
C
G
C
T
G
T
C
T
A
T
C
G
A
T
T
T
C
A
T
A
T
C
C
C
C
A
C
A
T
T
T
A
T
T
C
C
T
C
C
C
C
C
C
A
A
T
A
C
C
T
G
G
T
A
A
T
G
C
G
G
C
G
A
T
C
A
C
C
T
C
T
T
C
A
A
G
C
A
A
C
A
G
G
C
C
T
G
A
G
C
C
G
C
A
T
T
A
G
T
T
T
G
G
C
C
C
A
G
G
C
G
G
A
A
G
A
C
A
T
C
T
C
T
T
A
A
G
G
A
C
G
G
A
C
G
T
C
C
T
T
G
G
C
G
C
G
G
A
T
A
G
G
A
G
C
A
G
A
G
C
T
G
A
C
T
C
T
A
T
A
C
A
A
C
C
A
A
C
G
C
C
T
A
A
T
A
T
C
C
T
G
G
A
T
A
T
A
A
C
C
A
T
G
A
A
A
G
A
C
A
C
A
C
C
G
C
A
C
C
C
A
A
G
C
C
C
A
T
A
G
A
T
C
C
T
A
A
C
C
G
T
T
C
G
C
A
T
C
T
G
C
G
G
T
A
T
C
C
T
G
T
T
T
G
T
G
C
G
C
T
T
A
A
A
G
G
G
G
C
C
T
G
A
G
G
C
G
C
G
C
C
T
C
C
C
A
G
C
T
G
G
A
T
A
A
T
G
C
A
C
A
C
A
T
G
A
C
T
A
A
G
C
T
G
G
T
C
T
T
G
T
A
G
T
T
T
G
T
A
A
C
A
G
G
C
  26,168,454
  26,169,278
  26,169,426
  26,170,724
  26,170,747
  26,170,844
  26,171,082
  26,171,985
  26,173,326
  26,173,680
  26,174,984
  26,175,576
  26,175,750
  26,175,985
  26,176,143
  26,176,517
  26,176,533
  26,176,629
  26,176,735
  26,178,376
  26,178,611
  26,179,126
  26,179,960
  26,182,281
  26,184,381
  26,185,980
  26,187,636
  26,188,651
  26,189,663
  26,190,147
  26,191,518
  26,193,146
  26,193,918
  26,194,210
  26,195,167
  26,197,889
  26,197,922
  26,197,959
  26,202,574
  26,203,320
  26,203,480
  26,203,502
  26,204,220
  26,204,228
  26,204,323
  26,204,784
  26,204,809
  26,207,216
  26,208,548
  26,208,710
  26,278,705
  26,278,873
  26,279,107
  26,302,966
  26,304,192
  26,304,746
  26,308,101
  26,308,602
  26,308,938
  26,309,067
  26,309,069
  26,310,356
  26,313,393
  26,313,956
  26,313,984
  26,314,030
  26,314,124
  26,314,741
  26,315,402
  26,315,530
  26,315,743
  26,316,010
  26,316,578
  26,317,886
  26,318,273
  26,318,281
  26,320,260
  26,321,489
  26,322,393
  26,322,588
  26,322,669
  26,322,966
  26,323,264
  26,323,272
  26,323,331
  26,323,450
  26,323,638
  26,324,311
  26,324,384
  26,324,643
  26,324,723
  26,325,340
  26,325,788
  26,326,848
  26,327,412
  26,327,753
  26,328,028
  26,328,302
  26,328,916
  26,328,917
  26,330,855
  26,331,801
  26,332,053
  26,332,054
  26,332,554
  26,333,806
  26,334,061
  26,334,270
  26,334,442
  26,334,763
  26,334,997
  26,335,088
  26,335,359
  26,336,100
  26,336,591
  26,336,907
  26,336,977
  26,337,561
  26,337,914
  26,343,883
  26,343,985
  26,344,015
  26,344,132
  26,344,166
  26,344,648
  26,344,917
  26,344,961
  26,345,159
  26,346,071
  26,347,219
  26,347,892
  26,348,266
  26,352,967
  26,353,849
  26,356,107
  26,359,209
  26,360,708
  26,360,885
  26,363,430
  26,365,079
  26,370,286
  26,372,867
  26,373,136
  26,373,276
  26,373,362
  26,374,746
  26,375,799
  26,376,221
  26,378,483
  26,381,630
  26,382,553
  26,384,098
  26,384,990
  26,385,858
  26,386,906
  26,386,916
  26,387,780
  26,388,829
  26,391,757
  26,392,306
  26,392,792
  26,395,358
  26,395,480
  26,396,129
  26,396,799
  26,396,964
  26,397,321
  26,397,332
  26,397,446
  26,397,542
  26,397,691
  26,397,736
  26,397,891
  26,398,519
  26,398,640
  26,398,763
  26,398,995
  26,399,549
  26,400,903
  26,401,667
  26,403,047
  26,403,607
  26,403,679
  26,404,249
  26,404,481
  26,405,164
  26,405,576
  26,406,319
  26,406,321
  26,406,860
  26,407,168
  26,408,592
  26,409,142
  26,409,524
  26,409,610
  26,411,737
  26,411,997
  26,412,065
  26,412,189
  26,412,260
  26,412,302
  26,412,423
  26,413,301
  26,413,859
  26,414,329
  26,414,332
  26,414,613
  26,415,078
  26,415,473
  26,416,235
  26,418,571
  26,418,948
  26,419,072
  26,420,764
  26,420,996
  26,421,268
  26,421,652
  26,421,751
  26,422,385
  26,422,504
  26,422,722
  26,423,560
  26,423,836
  26,424,770
  26,427,668
  26,427,865
  26,428,594
  26,428,638
  26,428,894
  26,429,274
  26,430,182
  26,430,245
  26,430,270
  26,430,904
  26,431,067
  26,431,128
  26,431,160
  26,431,167
  26,431,195
  26,431,405
  26,431,439
  26,431,571
  26,431,744
  26,432,304
  26,432,310
  26,432,312
  26,432,335
  26,433,142
  26,435,755
  26,436,999
  26,437,111
  26,437,408
  26,437,544
  26,437,716
  26,437,907
  26,438,557
  26,438,560
  26,439,171
  26,439,290
  26,439,383
  26,439,704
  26,439,739
  26,439,866
  26,440,133
  26,440,141
  26,441,167
  26,441,361
  26,442,481
  26,443,309
  26,443,585
  26,443,670
  26,445,334
  26,446,007
  26,446,063
  26,446,787
  26,447,322
  26,449,323
  26,449,467
  26,449,593
  26,449,739
  26,451,149
  26,451,564
  26,453,055
  26,453,293
  26,453,373
  26,454,084
  26,454,323
  26,454,927
  26,455,243
  26,455,517
  26,456,797
  26,457,398
  26,457,696
  26,457,697
  26,457,775
  26,457,816
  26,460,975
  26,460,986
  26,461,449
  26,464,725
  26,466,270
  26,468,303
  26,468,304
  26,469,863
  26,470,585
  26,472,271
  26,472,370
  26,472,420
  26,475,166
  26,475,808
  26,477,492
  26,479,567
  26,480,941
  26,482,595
  26,483,161
  26,485,103
  26,485,752
  26,486,612
  26,487,931
  26,489,169
  26,489,487
  26,493,870
  26,493,896
  26,494,519
  26,502,007
  26,502,239
  26,502,564
  26,502,865
  26,503,010
  26,503,741
  26,504,104
  26,539,960
  26,539,963
  26,539,964
  26,550,126
  26,593,672
  26,593,736
  26,628,746
  26,629,026
  26,629,050
  26,629,097
  26,629,528
  26,629,529
  26,641,842
  26,653,369
  26,653,370
  26,654,311
  26,658,866
  26,659,140
  26,660,862
  26,661,525
  26,663,979
  26,666,037
  26,666,087
  26,666,911
  26,667,025
  26,667,179
  26,667,438
  26,667,529
  26,667,676
  26,667,696
  26,668,008
  26,668,367
  26,668,415
  26,668,851
  26,668,901
  26,668,956
  26,668,982
  26,668,990
  26,668,998
  26,669,080
  26,669,227
  26,669,228
  26,669,387
  26,669,454
  26,669,620
  26,669,660
  26,669,683
  26,669,768
  26,670,094
  26,670,107
  26,670,118
  26,670,134
  26,670,173
  26,670,200
  26,670,233
  26,670,248
  26,670,392
  26,670,407
  26,670,414
  26,670,532
  26,670,589
  26,670,592
  26,670,599
  26,670,603
  26,670,656
  26,670,683
  26,670,724
  26,670,755
  26,670,761
  26,670,768
  26,670,808
  26,676,878
  26,677,027
  26,677,937
  26,678,059
  26,678,073
  26,678,185
  26,678,250
  26,678,261
  26,678,323
  26,678,345
  26,678,793
  26,679,160
  26,679,223
  26,679,449
  26,679,613
  26,679,620
  26,680,087
  26,680,351
  26,680,396
  26,680,481
  26,680,482
  26,680,566
  26,680,736
  26,680,737
  26,680,795
  26,680,801
  26,681,040
  26,681,424
  26,681,931
  26,681,936
  26,682,498
  26,682,527
  26,682,705
  26,682,813
  26,683,034
  26,683,037
  26,683,062
  26,683,344
  26,683,455
  26,684,716
  26,686,113
  26,686,313
  26,686,949
  26,687,444
  26,689,050
  26,689,765
  26,692,574
  26,693,232
  26,693,239
  26,693,285
  26,693,378
  26,693,394
  26,693,445
  26,693,458
  26,693,736
  26,693,788
  26,693,972
  26,694,084
  26,694,281
  26,694,313
  26,694,318
  26,694,514
  26,694,570
  26,695,855
  26,696,813
  26,697,660
  26,698,384
  26,699,024
  26,699,264
  26,699,393
  26,700,225
  26,700,466
  26,700,506
  26,701,080
  26,702,065
  26,702,540
  26,702,592
  26,703,340
  26,703,542
  26,704,352
  26,704,442
  26,705,439
  26,706,240
  26,706,639
  26,706,982
  26,707,192
  26,707,213
  26,707,223
  26,707,259
  26,707,293
  26,707,388
  26,707,455
  26,707,490
  26,709,201
  26,709,865
  26,709,897
  26,710,052
  26,711,348
  26,711,349
  26,713,010
  26,714,154
  26,714,348
  26,714,500
  26,715,114
  26,715,623
  26,716,953
  26,717,144
  26,717,345
  26,717,890
  26,718,178
  26,718,552
  26,719,325
  26,720,762
  26,724,631
  26,725,741
  26,725,782
  26,725,784
  26,725,850
  26,725,962
  26,725,971
  26,725,980
  26,727,694
  26,728,069
  26,728,502
  26,728,557
  26,728,788
  26,728,912
  26,729,081
  26,729,126
  26,729,253
  26,729,274
  26,729,307
  26,729,628
  26,729,761
  26,730,231
  26,731,073
  26,731,567
  26,733,137
  26,733,255
  26,733,420
  26,733,440
  26,733,637
  26,733,825
  26,733,860
  26,733,986
  26,734,188
  26,734,191
  26,734,333
  26,734,418
  26,734,696
  26,734,764
  26,735,047
  26,735,385
  26,735,600
  26,735,632
  26,736,610
T
T
G
C
C
C
A
G
G
C
G
T
G
T
G
T
G
A
G
A
G
C
A
G
A
T
G
G
G
A
A
C
A
G
T
T
C
G
T
C
C
T
A
C
A
T
T
T
G
T
T
G
G
G
T
G
G
T
T
A
C
A
A
C
A
C
T
T
G
G
G
A
G
A
C
C
T
A
A
C
T
A
C
T
A
A
C
A
C
C
A
C
A
G
G
C
G
C
G
G
C
T
A
T
C
G
C
A
G
T
A
G
A
A
C
C
C
T
C
C
T
T
G
C
T
G
C
C
T
A
T
C
G
T
C
C
T
A
A
A
G
G
T
G
C
G
C
T
A
T
C
G
A
G
G
C
T
G
A
T
G
C
C
T
T
G
C
T
A
T
G
C
G
C
C
C
T
G
C
C
T
G
G
G
A
A
A
A
C
G
T
G
G
A
T
G
A
A
A
A
C
G
A
T
A
T
C
A
G
A
A
T
G
G
A
G
G
A
C
T
C
C
C
T
A
G
A
C
A
G
G
C
G
C
A
T
A
T
G
A
G
A
C
C
G
A
C
T
T
G
G
A
T
T
G
T
G
T
G
G
G
T
C
A
A
C
C
C
C
T
T
A
T
T
C
G
G
G
G
G
T
C
T
C
A
T
C
G
C
T
G
G
A
C
A
T
T
T
G
A
G
A
A
T
A
T
G
C
C
G
A
A
A
A
T
A
T
G
T
T
A
A
A
A
A
G
G
C
G
T
G
G
G
G
T
G
C
C
C
C
C
C
A
T
A
G
A
T
G
A
A
G
A
A
A
T
A
T
C
A
G
A
G
C
T
T
A
A
G
A
G
A
G
C
A
G
G
G
A
C
G
C
G
T
G
G
T
A
G
G
G
A
G
T
G
C
C
C
C
C
T
T
C
A
T
T
A
T
C
T
G
T
T
C
C
A
G
G
G
T
G
T
G
T
G
T
A
A
A
T
T
T
T
G
G
A
A
A
T
G
C
G
A
G
C
A
T
C
T
C
G
T
A
C
C
A
T
T
G
C
T
A
A
G
A
A
A
T
G
T
T
C
A
A
C
A
A
C
A
T
T
G
C
C
G
C
G
A
T
A
A
G
A
T/G
A
G
T
A
T
T
T
C
T
T
C
G
T
G
G
A
G
C
A
T
G
A
G
T
C
A
T
G
T
T
T
G
C
T
T
T
C
G
G
A
T
A
A
A
C
T
C
G
A
C
G
A
A
G
G
A
C
G
G
T
C
C
A
T