Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 37,118 (bp)   Positions: 99
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SR/JrHsd (MCW) 
.291
.122
.005
.001
.0
.001
.716
.006
.004
.004
.001
.696
.009
.001
.007
.002
.002
.0
.012
.004
.003
.0
.0
.001
.002
.018
.004
.0
.001
.994
1.0
.98
.031
1.0
.999
.0
.004
.0
.287
.0
.995
1.0
.973
.0
.005
.01
.999
1.0
.0
.016
.001
.0
.0
.008
--
--
--
.059
.074
.376
.006
.049
.013
.002
.033
.04
.025
.01
.0
.078
--
--
--
.001
.39
.075
.091
.121
.091
.482
.003
.001
.001
.02
.051
.009
.001
.0
.003
.0
.076
.0
.006
.0
.001
.001
1.0
.0
.137
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Pkd2l1
Pkd2l1
Pkd2l1
Pkd2l1
Pkd2l1
Pkd2l1
Pkd2l1
Pkd2l1
Pkd2l1
Pkd2l1
G
A
A
T
T
T
T
T
C
T
T
T
G
T
G
G
C
C
A
T
T
A
G
C
C
T
C
G
T
T
T
A
C
G
T
G
G
T
A
G
T
A
T
C
T
G
C
T
C
T
C
T
G
G
G
G
A
G
A
C
A
A
T
T
G
A
A
A
G
T
T
C
A
G
A
G
T
G
T
C
T
G
A
G
G
T
C
G
T
C
A
C
C
C
C
G
A
T
C
  263,922,828
  263,923,938
  263,924,243
  263,924,770
  263,924,809
  263,924,813
  263,925,145
  263,925,452
  263,925,598
  263,926,085
  263,926,298
  263,926,602
  263,926,833
  263,926,884
  263,926,885
  263,927,007
  263,927,102
  263,927,240
  263,927,262
  263,927,284
  263,927,286
  263,927,354
  263,927,374
  263,927,580
  263,927,661
  263,927,824
  263,927,897
  263,927,921
  263,928,014
  263,928,068
  263,928,144
  263,928,156
  263,928,171
  263,928,549
  263,928,597
  263,928,746
  263,928,769
  263,929,047
  263,929,368
  263,929,577
  263,929,877
  263,929,904
  263,930,015
  263,930,985
  263,931,239
  263,931,264
  263,931,541
  263,931,627
  263,931,798
  263,932,462
  263,932,771
  263,932,981
  263,933,666
  263,933,911
  263,934,718
  263,934,744
  263,934,914
  263,935,072
  263,935,132
  263,935,300
  263,935,407
  263,935,481
  263,935,971
  263,937,411
  263,941,794
  263,941,798
  263,941,802
  263,941,806
  263,941,822
  263,943,951
  263,944,124
  263,944,185
  263,944,464
  263,944,520
  263,945,385
  263,946,663
  263,946,697
  263,946,701
  263,947,547
  263,947,628
  263,948,974
  263,949,168
  263,949,689
  263,950,161
  263,950,679
  263,951,728
  263,951,896
  263,952,396
  263,952,407
  263,952,897
  263,954,604
  263,956,665
  263,956,852
  263,957,796
  263,957,918
  263,958,241
  263,958,310
  263,958,764
  263,959,038
A
C
G
C
C
C
C
C
T
C
C
C
A
C
A
A
T
C/T
G
C
C
G
A
T
T
C
T
A
C
C
C
G
T
A
C
T
A
C
C
C
C
G
G
T
C
A
A
A
A
C
A
C
A
A
A
A
G
A
G
T
G
G
C
C
G/A
A/G
A/G
A/G
A
C
T/C
C/T
A/C
T
G
A
G
A
C
T
C
A
G
A
A
C
T
A
G
T
G
G
T
T
T
T
G
C
A