Variant Visualizer (Variants)

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Sequence Annotation

Assembly Rnor_6.0

Conservation

Genes ( + )

Genes ( + )

Genes ( - )

Rnor 6.0

HXB4/IpcvMcwi (2020)

.033	.001	.033	.011	.0	.0	.001	.065	.437	.004	.998	.007	--	--	--	--	.0	.001	.004	.001	.042	--	.868	.99	.0	.094	.0	.007	.015	.0	.004	.156	.064	.007	.01	--	--	.113	.126	.251	.021	.002	.023	.226	.505	.562	.596	.815	.88	.494	.235	.001	.002	.044	.017	.014	.028	.016	.024	.01	.026	.06	.221	.251	.252	.381	.359	.655	.756	.631	.023	.008	.014	.018	.015	.016	.127	.123	--	--	--	--	--	--	--	--	.011	.061	.013	.017	.069	.001	.001	.191	.001	.006	.029	.026	.0	.001	.001	.0	.01	.004	.002	.0	.097	.104	.002	.001	.0	.017	.006	.002	.001	.0	.0	.894	1.0	--	.0	.0	.0	.002	.0	.053	.004	.002	.078	.048	.194	.066	.069	.391	.002	.004	.042	.084	1.0	.001	.0	.002	.013	.037	.003	.078	.001	.0	.993	.15	.046	.05	.001	.123	.02	--	--	.057	--	--	--	.014	.0	.046	.004	.018	.001	.463	.004	.205	.19	.003	.005	.001	.001	.001	.0	.029	.027	.048	.039	.026	.038	.044	.005	.003	.001	.006	.007	.003	.006	.005	.001	.001	.001	.004	.001	.02	.0	.001	.006	.006	.032	.029	.028	.036	.059	.007	.009	.414	.703	.011	.007	.013	.018	.003	.001	.124	.142	.101	.061	.066	.261	.384	.326	.06	.04	.023	.065	.032	.017	.001	.001	.001	.0	.015	.027	.004	.012	.062	.081	.044	.018	.008	.023	.014	.004	.008	.012	.013	.008	.02	.044	.06	.074	.054	.056	.056	.053	.001	.115	.001	.009	.106	.091	.036	.001	.311	.089	.345	.003	.0	.001	.0	.004	.006	.053	.308	.01	.354	.066	.001	.018	.844	.273	.0	.119	.421	.022	.004	.001	.019	.104	.028	.001	.001	.138	--	--	--	--	.001	.009	.001	.001	.006	.002	.021	.066	.419	.221	.513	.621	.037	.011	.016	.054	.059	.029	--	--	--	--	--	--	--	--	--	--	--	--	--	.013	.0	.005	.001	.156	.0	.012	.0	.004	--	--	--	.005	.676	.0	.022	.001	.011	.002	--	--	.014	.002	.013	.0	.002	.001	.001	.022	.002	.006	.007	.004	.006	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.001	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.023	.128	.002	.092	.028	.001	.637	1.0	.001	.008	.0	.283	.053	.463	.0	.0	.0	.004	.002	.082	.513	.002	.012	.033	.009	.001
Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex										Phex
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
T	A	A	-	C	-	A	T	T	A	T	C	G	C	-	A	A	G	C	G	T	C	G	G	A	C	T	C	T	C	-	C	-	A	T	T	-	C	C	T	-	C	C	C	T	T	T	-	T	T	C	-	C	G	C	T	-	A	G	2	T	C	T	A	A	T	G	G	A	-	G	A	C	-	-	T	A	-	G	-	T	C	G	T	G	-	-	A	A	C	A	T	-	-	T	G	C	C	-	C	-	-	A	-	G	C	-	-	A	-	C	A	-	T	-	G	C	T	-	T	T	C	C	T	T	T	-	T	A	C	T	T	-	A	6	C	A	C	G	T	T	C	T	G	C	C	A	A	G	A	A	A	T	T	C	C	T	-	C	T	A	G	A	G	A	C	A	G	C	C	-	G	C	G	T	A	-	2	C	C	G	C	C	C	C	4	C	C	G	G	2	-	A	T	2	C	C	3	G	C	3	-	C	2	2	A	4	A	T	T	C	C	2	6	2	C	C	G	C	T	2	G	14	G	C	G	C	3	G	G	C	C	2	-	C	A	C	2	3	15	9	3	C	G	2	2	G	G	G	5	4	G	2	G	C	G	C	G	4	T	T	3	G	C	G	C	C	G	T	A	C	G	2	C	C	G	C	C	G	T	G	C	G	C	-	2	A	-	T	C	A	G	C	G	G	G	C	-	-	G	G	T	-	A	G	T	2	2	C	G	-	5	C	-	A	-	-	A	A	C	-	C	C	A	T	A	A	T	T	A	T	G	G	G	A	G	A	T	G	-	T	C	C	-	C	C	T	-	C	T	A	8	T	C	3	C	C	C	C	T	C	T	-	-	A	2	C	C	T	A	T	-	T	G	G	T	A	-	-	C	T	-	C	T	-	A	2	G	4	C	-	2	G	C	A	-	-	-	A	C	T	C	G	A	C	A	-	-	2	C	G	T	-	A	T	A	G	G	4	-	G	G	-	4	-	C	C	A	-	T	A	A	T	T	G	A	C	G	A	G	A	A	G	G
40,460,448	40,461,724	40,462,109	40,462,409	40,463,429	40,463,700	40,463,728	40,463,932	40,464,143	40,464,177	40,465,344	40,466,150	40,469,084	40,469,364	40,469,451	40,469,903	40,470,915	40,471,512	40,475,085	40,476,390	40,476,693	40,481,984	40,482,346	40,482,695	40,483,362	40,483,482	40,485,256	40,486,819	40,488,277	40,489,859	40,491,053	40,492,387	40,492,449	40,493,259	40,493,394	40,505,384	40,505,459	40,505,812	40,505,924	40,506,254	40,506,371	40,506,448	40,506,520	40,506,800	40,506,813	40,506,824	40,506,827	40,506,834	40,506,850	40,506,861	40,506,870	40,506,883	40,506,888	40,506,922	40,506,927	40,506,929	40,506,942	40,506,950	40,506,954	40,506,961	40,506,968	40,506,975	40,506,993	40,507,010	40,507,017	40,507,041	40,507,045	40,507,060	40,507,071	40,507,085	40,507,116	40,507,119	40,507,128	40,507,140	40,507,144	40,507,145	40,507,162	40,507,174	40,507,184	40,507,202	40,507,205	40,507,207	40,507,215	40,507,239	40,507,243	40,507,265	40,507,297	40,507,319	40,507,397	40,507,400	40,509,766	40,509,800	40,509,802	40,509,823	40,509,872	40,509,881	40,509,886	40,509,908	40,509,938	40,509,963	40,509,968	40,509,984	40,509,987	40,510,006	40,510,032	40,510,047	40,510,125	40,510,133	40,510,145	40,510,159	40,510,166	40,510,184	40,510,192	40,510,202	40,510,211	40,510,234	40,510,545	40,510,804	40,510,873	40,513,059	40,513,232	40,513,389	40,513,412	40,513,418	40,513,428	40,513,808	40,513,893	40,513,914	40,514,163	40,514,170	40,514,311	40,514,413	40,514,499	40,515,314	40,515,376	40,515,696	40,516,177	40,516,285	40,516,723	40,517,686	40,517,694	40,518,350	40,519,068	40,519,128	40,519,648	40,520,461	40,520,855	40,521,151	40,521,754	40,523,311	40,526,333	40,526,335	40,528,633	40,530,663	40,530,766	40,531,474	40,542,816	40,544,167	40,546,343	40,546,373	40,546,484	40,548,642	40,550,080	40,552,299	40,553,368	40,553,564	40,558,893	40,560,374	40,563,034	40,563,450	40,563,623	40,566,382	40,566,384	40,566,505	40,566,513	40,566,515	40,567,627	40,567,797	40,567,802	40,567,805	40,567,817	40,567,822	40,567,824	40,567,826	40,567,840	40,567,845	40,567,906	40,567,911	40,567,920	40,567,928	40,567,932	40,567,939	40,567,941	40,567,942	40,567,949	40,567,974	40,567,977	40,567,986	40,567,992	40,567,999	40,568,009	40,568,018	40,568,026	40,568,034	40,568,038	40,568,040	40,568,047	40,568,063	40,568,064	40,568,072	40,568,102	40,568,118	40,568,122	40,568,135	40,568,147	40,568,165	40,568,167	40,568,178	40,568,191	40,568,193	40,568,208	40,568,217	40,568,229	40,568,254	40,568,265	40,568,275	40,568,278	40,568,281	40,568,298	40,568,302	40,568,308	40,568,329	40,568,332	40,568,335	40,568,339	40,568,345	40,568,349	40,568,361	40,568,367	40,568,455	40,568,477	40,568,488	40,568,497	40,568,502	40,568,523	40,568,528	40,568,535	40,568,545	40,568,550	40,568,552	40,568,564	40,568,570	40,568,577	40,568,581	40,568,586	40,568,591	40,568,593	40,568,596	40,568,599	40,571,784	40,576,916	40,579,466	40,584,102	40,588,058	40,588,138	40,589,204	40,590,561	40,592,266	40,593,943	40,593,959	40,597,279	40,597,307	40,597,310	40,597,317	40,597,331	40,609,142	40,613,035	40,613,921	40,614,689	40,614,710	40,615,340	40,615,791	40,617,303	40,617,821	40,618,322	40,618,784	40,622,134	40,622,550	40,622,605	40,622,631	40,623,667	40,624,637	40,624,979	40,625,113	40,625,381	40,625,469	40,626,493	40,626,877	40,627,033	40,627,055	40,627,466	40,631,666	40,631,674	40,631,917	40,631,918	40,631,926	40,631,930	40,631,936	40,631,942	40,631,953	40,631,971	40,632,012	40,632,025	40,632,059	40,632,069	40,632,076	40,632,079	40,632,090	40,632,098	40,638,901	40,638,908	40,639,077	40,639,259	40,639,291	40,639,292	40,639,316	40,639,475	40,639,562	40,639,862	40,648,579	40,649,371	40,649,576	40,651,942	40,652,410	40,652,509	40,654,055	40,654,952	40,656,014	40,656,422	40,657,841	40,658,822	40,659,285	40,659,300	40,659,305	40,661,663	40,661,987	40,663,330	40,664,498	40,665,482	40,667,287	40,669,303	40,671,599	40,671,699	40,677,280	40,679,095	40,684,634	40,684,903	40,684,932	40,684,935	40,685,399	40,686,837	40,687,317	40,687,323	40,687,328	40,687,351	40,687,391	40,689,634	40,689,643	40,689,671	40,689,674	40,689,681	40,689,703	40,689,711	40,689,723	40,689,735	40,689,751	40,689,773	40,689,782	40,689,784	40,689,788	40,689,816	40,689,854	40,689,866	40,689,873	40,689,882	40,689,895	40,689,918	40,689,941	40,689,946	40,689,951	40,689,969	40,689,973	40,689,998	40,690,009	40,690,017	40,690,048	40,690,056	40,690,062	40,690,077	40,690,080	40,690,090	40,690,094	40,690,108	40,690,127	40,690,146	40,690,157	40,690,167	40,690,208	40,690,234	40,690,249	40,690,255	40,690,266	40,690,278	40,690,325	40,690,346	40,690,350	40,690,356	40,690,364	40,694,259	40,695,501	40,703,458	40,703,482	40,703,484	40,703,487	40,703,507	40,703,541	40,703,687	40,705,824	40,712,404	40,712,459	40,712,885	40,714,947	40,715,502	40,715,552	40,715,557	40,715,918	40,717,388	40,717,411	40,717,940	40,717,950	40,717,951	40,717,962	40,717,966	40,717,976
C	G	G	T	T	15	T	-	G	G	C	T	A	A	2	G	G	A	T	A	C	C/A	T	A	G	G	C	T	C	T	A	-	T	G	A	C	2	G	T	C	A	A	T	-	-	-	-	G	-	-	-	T	-	-	T	C	A	G	-	-	-	T	-	-	-	-	-	-	-	A	-	-	-	T	2	G	-	G	-	G	-	G	T	-	-	T	T	-	-	-	-	A	T	A	C	T	A	T	A	-	T	A	-	C	-	G	A	T	G	G	-	-	T	-	G	A	T	G	C	C	G	T	T	C	C	-	3	C	C	A	T/C	T/C	-/A	G	-	T	G	T	A	A	G	A	C	A	T	T	G	-	A	G	T	C	C	C	G	T	G	C	C/G	T/C	G	C	G	T	G	T	G	C	T	T	-/T	T	-	A	A	T	-/19	-	-	-	-	-	G	-	-	-	-	-	-	-	-	C	C	A	-	-	-	-	-	-	-	A	-	-	-	T	-	T	G	-	-	-	-	-	-	-	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	C	A	-	C	T	-	T	T	A	-	-	G	C	-	G	C/G	T	A	A	A	A	A	T	A	T	2	2/-	T	3	-	G	G	A	T	T	A	C	T	3	T	C	A	C	C	G	A	-	-	-	-	-	G	-	A	C	-	A	A	-	-	-	A	G	T	C	C	C	G	C	G	C	C	T	A	A	T	T	T	A	A	G	C	T	-	T	T	T	G	T	T	C	T	-	-	A	-	G	A	T	T	C	A	G	A	A	-	-	-	-	A	T	-	A	-	-	-	-	-	C	A	-	-	A	-	-	T	-	-	-	-	T	A	-	-	-	-	T	A	C	-	-	-	-	-	-	-	-	A	2	-	-	-	-	A	-	-	-	-	-	-	4	T	T	4	-	T	-	A	G	2	-	G	C	C	G	A	A/-	T	C	G	A	T	-	-	T/T