Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 55,135 (bp)   Positions: 105
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
GK/Ox (RGD) 
.003
.209
.014
.005
.42
.009
.002
.003
.056
.028
.0
.017
.174
.002
.0
--
--
--
--
.0
.0
.0
.007
.0
.0
.008
.0
.012
.0
.0
.0
.001
.0
.0
.028
.006
.0
.003
.006
.0
.0
.0
.018
.001
.331
.005
.001
.0
.005
.002
.001
.004
.017
.01
.002
.0
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.001
.007
.0
.001
.018
.002
.002
.001
.009
.0
.004
.154
.027
.016
.001
.008
.002
.017
.006
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Nlrp1a
Nlrp1a
Nlrp1a
Nlrp1a
Nlrp1a
Nlrp1a
Nlrp1a
Nlrp1a
Nlrp1a
Nlrp1a
Nlrp1a
C
G
T
C
G
T
G
C
C
A
G
G
C
A
C
C
C
C
G
A
T
T
C
T
G
G
T
C
T
C
T
G
G
A
A
C
T
G
G
A
G
C
A
A
C
C
T
T
C
G
A
T
C
G
G
C
A
A
T
C
A
T
T
T
A
C
G
G
T
T
T
G
A
C
A
C
A
T
A
A
A
A
G
T
C
T
A
C
A
C
A
A
C
A
T
A
A
G
G
A
C
T
T
C
C
  57,692,525
  57,693,445
  57,693,484
  57,693,501
  57,694,142
  57,694,656
  57,695,115
  57,696,341
  57,698,791
  57,701,811
  57,702,291
  57,702,473
  57,702,535
  57,704,413
  57,704,872
  57,709,724
  57,714,326
  57,716,850
  57,716,902
  57,719,792
  57,721,684
  57,723,358
  57,730,088
  57,731,761
  57,737,618
  57,737,677
  57,737,792
  57,737,805
  57,737,860
  57,737,862
  57,737,866
  57,738,037
  57,738,080
  57,738,103
  57,738,144
  57,738,154
  57,738,255
  57,738,288
  57,738,328
  57,738,346
  57,738,347
  57,738,412
  57,738,430
  57,738,444
  57,738,454
  57,738,477
  57,738,479
  57,738,494
  57,738,503
  57,738,560
  57,738,567
  57,738,598
  57,738,644
  57,738,662
  57,738,905
  57,738,927
  57,739,213
  57,740,318
  57,740,362
  57,740,417
  57,740,422
  57,740,449
  57,740,490
  57,740,543
  57,740,561
  57,740,722
  57,740,894
  57,742,185
  57,745,237
  57,745,347
  57,745,388
  57,745,419
  57,745,655
  57,745,716
  57,745,719
  57,745,725
  57,745,772
  57,745,863
  57,745,865
  57,745,945
  57,745,948
  57,746,391
  57,746,501
  57,746,651
  57,746,767
  57,746,879
  57,746,922
  57,746,961
  57,746,966
  57,747,082
  57,747,125
  57,747,126
  57,747,132
  57,747,140
  57,747,176
  57,747,264
  57,747,293
  57,747,382
  57,747,427
  57,747,477
  57,747,493
  57,747,503
  57,747,523
  57,747,572
  57,747,576
T
A
A
T
A
C
A
T
G
T
C
A
A
C
T
A
T
T
A
G
C
A
T
C
A
A
C
T
C
G
G
A
A
G
G
G
C
T
A
T
A
T
T
G
G
T
C
G
G
C
G
A
T
A
T
T
C
G
G
A
G
C
C
G
G
T
A
A
A
C
G
A
G
T
T
A
G
C
G
G
C
C
C
C
G
C
G
T
G
A
T
T
T
T
C
G
C
A
T
T
G
A
A
T
G