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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 688,271 (bp)   Positions: 584
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
F344/NRrrc (MCW) 
--
--
.0
.007
.066
.007
.0
.001
--
.003
--
--
--
--
.001
.014
.0
.0
.0
.008
.001
.002
--
--
.041
.012
--
--
.0
.007
.119
.011
.118
.023
.004
.038
.003
.099
.003
.032
--
--
.048
.001
.124
.05
.014
.001
.04
.021
.0
.161
.028
.003
.001
.024
.02
.003
.001
.0
.0
.015
.993
.015
.0
.002
.002
.0
.01
.001
.0
.002
.012
.001
.024
.75
.002
.004
.001
.462
.0
.991
.0
.019
.01
.0
.012
.018
.0
.005
.008
.072
.036
.027
.038
.005
.009
.005
.008
.004
.001
.032
.139
.024
.019
.001
.022
.001
.003
.038
.002
--
--
--
--
--
--
--
--
--
--
--
--
.007
.036
.018
.005
.107
.007
.023
.013
.067
.007
.0
.004
.493
.006
.207
.021
.006
.005
.042
.026
.015
.027
.017
.009
.001
--
--
.038
.012
.013
.012
--
--
--
--
.005
.008
.028
.041
--
--
--
--
--
--
--
--
.126
.004
.001
.004
.007
.0
.142
.0
.0
.0
.011
.989
--
--
.998
.377
.053
.981
.96
.996
.99
.908
1.0
.999
.993
1.0
.856
.997
1.0
.991
.998
.982
.998
--
--
--
.001
.02
1.0
.561
--
--
--
--
--
.001
.091
.005
.357
.002
.522
.013
.295
.052
--
--
--
.072
.073
.06
.921
--
--
--
--
.004
.661
.932
.054
.021
.006
.007
.0
.052
.0
.001
--
--
--
--
--
.01
.0
.0
.001
.002
.0
.001
.0
.0
.0
.008
.095
.852
.075
.0
.0
.001
--
.002
.001
.0
.005
.0
.001
.008
.015
.025
.001
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
.043
--
--
.014
.839
.002
.0
.017
.176
.008
.0
.009
.024
.001
.001
.0
.493
.14
.0
.004
.001
.105
.119
.001
.113
--
.002
.013
.52
.538
.0
.096
.0
.0
.0
.0
.0
.0
.003
.004
.001
.012
.261
.032
--
--
--
--
--
--
--
--
--
--
--
.371
.001
.001
--
--
--
.002
--
--
.004
--
--
.014
.003
.0
.002
.0
.161
--
.006
.015
.0
.007
.007
.005
.003
.016
.0
.015
.142
.01
.001
.036
.0
.001
.038
.019
.012
.0
.0
.014
.07
.712
.001
.003
.007
.014
.018
--
--
.0
.001
.001
.0
.0
.0
.003
.001
.0
.0
.002
.001
.0
.008
.016
.794
.001
.0
.0
.002
.061
.009
.255
.022
.007
.002
--
--
--
--
--
--
--
--
--
--
--
--
.003
.0
.015
.001
.0
.0
.081
.0
.002
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.001
.018
.007
.152
.225
.014
.008
.013
.0
.008
.874
.98
.067
.009
.0
.011
.001
.002
.502
--
.052
.002
.028
.006
--
--
--
.014
.0
.0
.0
.202
.002
.997
.004
.043
.002
--
--
.01
.066
.0
.885
.038
.001
.037
.012
.037
.095
.017
.003
--
--
--
--
--
--
.057
.101
.088
.052
.079
.002
.035
.002
.033
.058
.006
.006
.012
.163
.001
.007
.289
.532
.007
.001
.0
.0
.0
.826
.998
1.0
.907
1.0
.006
.004
.002
.004
.0
.041
.199
.0
.0
.01
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
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Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
Nkain2
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C
C
G
T
T
C
T
T
A
C
G
C
T
C
A
A
C
G
C
G
T
C
A
A
A
T
A
C
C
G
G
G
C
G
C
T
C
G
G
A
A
G
G
G
G
C
G
T
A
G
T
T
C
C
T
G
G
T
A
G
A
T
G
T
C
C
T
G
C
A
T
A
A
C
G
G
G
A
T
C
A
C
G
C
T
C
G
G
G
G
C
G
G
A
T
C
C
G
G
C
A
G
G
T
C
G
G
A
C
C
C
C
G
C
A
G
T
T
G
G
T
T
C
C
C
G
A
A
T
T
A
A
A
A
A
A
A
T
T
T
G
C
C
C
G
A
C
C
G
T
A
C
A
C
A
G
G
G
G
A
C
A
G
T
T
G
C
C
T
C
G
C
A
G
A
G
A
T
T
G
T
A
C
T
T
T
G
T
T
C
C
T
T
A
A
T
G
G
C
C
A
G
A
A
C
T
G
C
C
T
C
G
G
G
G
C
C
T
T
A
T
A
A
G
C
G
A
A
A
T
T
G
C
G
G
A
C
T
A
A
G
C
T
C
A
C
A
C
C
A
A
C
A
C
T
G
T
T
C
C
C
A
C
A
G
C
G
G
T
T
C
T
A
C
C
G
G
T
C
A
G
A
A
A
A
G
A
T
C
C
G
C
G
C
G
C
G
G
T
C
T
T
C
A
T
A
T
G
C
A
A
A
G
C
C
T
A
C
C
T
G
A
C
C
T
C
A
A
T
C
C
C
C
A
A
G
T
T
T
G
C
A
T
G
G
G
A
G
A
T
G
A
G
T
T
G
A
A
C
A
A
C
T
C
A
G
G
T
C
C
A
A
T
A
A
T
G
A
T
T
A
A
C
C
C
C
T
T
A
A
G
C
A
C
C
C
A
C
G
A
G
G
A
T
T
G
G
A
C
G
A
T
C
T
A
A
A
T
G
A
A
C
A
G
A
A
T
C
C
A
A
G
T
T
C
G
A
G
G
C
T
G
T
A
A
T
C
A
A
A
C
T
G
G
G
C
G
C
T
G
T
G
C
A
T
A
G
A
T
T
G
G
G
T
T
G
G
G
A
T
C
T
T
C
T
T
G
G
A
G
T
T
C
G
A
G
T
C
A
A
A
A
C
C
G
C
T
G
A
A
T
G
A
T
C
C
C
A
G
G
G
A
A
T
G
A
A
T
A
C
G
C
G
T
G
G
G
A
G
C
G
T
G
A
A
A
G
T
C
A
C
T
C
G
C
T
C
T
C
G
G
C
G
G
C
A
T
T
G
C
G
C
C
C
C
G
G
C
G
A
G
G
A
C
  27,490,117
  27,490,131
  27,557,433
  27,557,556
  27,557,563
  27,557,694
  27,557,887
  27,557,997
  27,558,895
  27,561,245
  27,567,939
  27,568,009
  27,576,832
  27,577,823
  27,583,648
  27,583,727
  27,585,174
  27,585,290
  27,585,376
  27,586,804
  27,589,044
  27,589,506
  27,590,654
  27,592,911
  27,600,599
  27,601,300
  27,609,847
  27,611,453
  27,615,951
  27,616,473
  27,616,557
  27,616,645
  27,616,770
  27,616,832
  27,616,944
  27,617,095
  27,617,124
  27,617,241
  27,617,634
  27,617,714
  27,618,323
  27,618,324
  27,618,598
  27,620,700
  27,620,868
  27,621,036
  27,621,178
  27,621,198
  27,621,224
  27,621,259
  27,621,276
  27,621,351
  27,621,407
  27,621,455
  27,621,571
  27,621,662
  27,622,932
  27,622,941
  27,622,946
  27,623,070
  27,623,071
  27,623,124
  27,623,156
  27,623,383
  27,623,485
  27,623,510
  27,623,525
  27,623,858
  27,624,023
  27,624,208
  27,624,859
  27,624,924
  27,624,992
  27,625,150
  27,625,492
  27,625,540
  27,625,628
  27,625,709
  27,625,740
  27,625,761
  27,625,795
  27,625,988
  27,626,219
  27,626,224
  27,626,265
  27,626,511
  27,626,576
  27,626,637
  27,626,688
  27,626,736
  27,626,790
  27,626,870
  27,626,918
  27,626,940
  27,626,956
  27,627,089
  27,627,163
  27,627,307
  27,627,399
  27,627,453
  27,627,460
  27,627,569
  27,627,698
  27,627,725
  27,627,745
  27,627,858
  27,628,173
  27,628,363
  27,628,369
  27,628,392
  27,628,532
  27,628,586
  27,628,663
  27,628,700
  27,628,890
  27,628,982
  27,629,115
  27,629,178
  27,629,230
  27,629,249
  27,629,255
  27,629,377
  27,629,398
  27,631,338
  27,631,428
  27,631,445
  27,631,474
  27,631,722
  27,631,839
  27,631,872
  27,631,921
  27,631,933
  27,632,161
  27,632,214
  27,632,222
  27,632,517
  27,632,589
  27,632,623
  27,632,713
  27,632,720
  27,632,721
  27,632,899
  27,632,942
  27,632,946
  27,633,027
  27,633,053
  27,633,345
  27,633,442
  27,633,491
  27,633,541
  27,633,568
  27,633,581
  27,633,617
  27,633,618
  27,633,897
  27,634,502
  27,634,541
  27,634,680
  27,635,064
  27,635,408
  27,635,891
  27,635,996
  27,636,054
  27,636,310
  27,636,342
  27,636,362
  27,636,409
  27,636,410
  27,636,429
  27,636,566
  27,636,662
  27,636,914
  27,637,259
  27,637,277
  27,637,336
  27,637,547
  27,637,815
  27,637,930
  27,637,985
  27,638,115
  27,638,121
  27,638,281
  27,638,918
  27,639,001
  27,639,280
  27,639,401
  27,639,643
  27,640,300
  27,640,368
  27,640,412
  27,640,448
  27,640,543
  27,640,633
  27,640,803
  27,640,836
  27,640,840
  27,640,887
  27,641,033
  27,641,116
  27,641,123
  27,641,158
  27,641,165
  27,642,987
  27,645,069
  27,645,203
  27,645,236
  27,648,031
  27,649,721
  27,650,015
  27,650,095
  27,653,034
  27,653,201
  27,653,860
  27,654,066
  27,654,343
  27,659,376
  27,659,585
  27,659,740
  27,660,164
  27,662,026
  27,662,447
  27,663,804
  27,664,785
  27,665,565
  27,666,854
  27,667,949
  27,669,386
  27,670,825
  27,671,255
  27,671,529
  27,671,613
  27,672,662
  27,672,749
  27,672,828
  27,673,630
  27,673,835
  27,676,556
  27,676,731
  27,677,525
  27,678,103
  27,678,362
  27,679,500
  27,680,510
  27,680,619
  27,681,161
  27,681,484
  27,683,352
  27,683,995
  27,684,049
  27,684,395
  27,684,628
  27,685,204
  27,685,498
  27,685,674
  27,685,792
  27,685,947
  27,685,995
  27,686,461
  27,686,726
  27,686,923
  27,687,326
  27,687,371
  27,688,168
  27,688,258
  27,688,330
  27,688,383
  27,688,419
  27,688,426
  27,689,495
  27,690,865
  27,690,875
  27,691,278
  27,691,658
  27,691,775
  27,692,234
  27,694,458
  27,694,505
  27,694,506
  27,695,655
  27,695,809
  27,696,268
  27,696,322
  27,696,735
  27,698,685
  27,698,686
  27,699,704
  27,700,993
  27,701,865
  27,704,868
  27,705,390
  27,705,553
  27,707,368
  27,707,733
  27,709,986
  27,710,938
  27,711,243
  27,711,998
  27,712,287
  27,712,684
  27,712,758
  27,714,360
  27,714,629
  27,715,932
  27,716,226
  27,716,301
  27,718,400
  27,719,986
  27,720,054
  27,721,656
  27,721,969
  27,722,629
  27,722,758
  27,722,788
  27,722,837
  27,723,118
  27,723,391
  27,723,580
  27,723,711
  27,724,528
  27,726,041
  27,726,441
  27,726,469
  27,726,473
  27,726,781
  27,726,898
  27,727,616
  27,727,768
  27,727,907
  27,728,559
  27,728,946
  27,729,228
  27,732,187
  27,732,281
  27,732,539
  27,733,309
  27,733,408
  27,733,539
  27,733,999
  27,734,105
  27,735,687
  27,736,370
  27,736,594
  27,737,145
  27,738,382
  27,740,653
  27,740,658
  27,740,761
  27,741,089
  27,745,783
  27,751,084
  27,751,116
  27,756,025
  27,756,950
  27,757,447
  27,759,231
  27,772,417
  27,772,786
  27,783,640
  27,785,312
  27,786,324
  27,799,424
  27,804,076
  27,810,744
  27,813,787
  27,813,925
  27,817,281
  27,829,669
  27,830,266
  27,830,511
  27,830,718
  27,830,725
  27,831,166
  27,832,136
  27,832,766
  27,833,043
  27,833,854
  27,834,136
  27,835,207
  27,836,291
  27,836,865
  27,837,115
  27,839,198
  27,839,348
  27,839,603
  27,839,952
  27,839,960
  27,840,585
  27,842,076
  27,845,348
  27,847,633
  27,848,550
  27,850,813
  27,850,886
  27,852,894
  27,853,477
  27,854,858
  27,855,848
  27,855,907
  27,858,521
  27,858,561
  27,859,103
  27,859,234
  27,859,258
  27,859,322
  27,859,475
  27,859,912
  27,860,016
  27,860,328
  27,860,437
  27,860,542
  27,860,557
  27,860,680
  27,861,070
  27,861,260
  27,861,373
  27,861,735
  27,861,765
  27,861,781
  27,861,910
  27,862,407
  27,862,512
  27,862,664
  27,862,808
  27,863,012
  27,863,161
  27,863,208
  27,863,283
  27,863,418
  27,863,611
  27,863,962
  27,864,088
  27,864,725
  27,864,758
  27,865,004
  27,865,263
  27,865,430
  27,865,543
  27,866,077
  27,866,373
  27,866,481
  27,867,191
  27,867,745
  27,868,463
  27,868,871
  27,868,924
  27,868,968
  27,869,196
  27,869,218
  27,869,824
  27,869,912
  27,869,943
  27,871,089
  27,871,221
  27,871,284
  27,871,316
  27,871,426
  27,871,433
  27,871,527
  27,871,796
  27,872,090
  27,872,261
  27,872,275
  27,872,348
  27,872,459
  27,872,607
  27,873,318
  27,873,341
  27,873,840
  27,874,124
  27,874,190
  27,874,238
  27,874,405
  27,874,582
  27,874,654
  27,875,166
  27,875,211
  27,875,423
  27,875,895
  27,875,912
  27,876,059
  27,876,375
  27,876,466
  27,876,468
  27,876,829
  27,876,989
  27,877,343
  27,877,377
  27,877,408
  27,877,592
  27,877,755
  27,877,856
  27,877,918
  27,878,326
  27,878,356
  27,878,713
  27,878,886
  27,878,909
  27,878,962
  27,879,047
  27,879,125
  27,879,138
  27,879,304
  27,879,321
  27,879,521
  27,881,060
  27,881,111
  27,940,142
  27,967,421
  28,013,058
  28,021,156
  28,037,302
  28,040,090
  28,042,561
  28,043,994
  28,044,254
  28,044,718
  28,047,138
  28,048,306
  28,048,706
  28,048,844
  28,051,512
  28,051,776
  28,054,583
  28,054,636
  28,055,441
  28,055,921
  28,058,277
  28,058,327
  28,059,059
  28,059,212
  28,060,279
  28,060,509
  28,062,168
  28,062,313
  28,063,857
  28,064,460
  28,064,509
  28,064,808
  28,064,897
  28,065,044
  28,065,290
  28,065,546
  28,065,579
  28,065,602
  28,065,617
  28,065,743
  28,065,976
  28,066,060
  28,066,482
  28,066,867
  28,081,076
  28,081,277
  28,081,329
  28,081,393
  28,081,525
  28,081,805
  28,081,866
  28,081,868
  28,081,874
  28,082,069
  28,082,549
  28,083,121
  28,083,190
  28,083,292
  28,083,342
  28,083,363
  28,083,441
  28,084,195
  28,084,224
  28,084,400
  28,084,503
  28,084,529
  28,084,601
  28,084,625
  28,084,692
  28,084,712
  28,084,867
  28,085,927
  28,086,275
  28,103,882
  28,120,589
  28,120,670
  28,120,738
  28,149,233
C/T
C/A
A
G
C
T
A
G
G
A
T
C/A
G
A
G
C
T
T
T
T
C
T
G
G
A/G
G
C
G
T
A
A
T
T
T
A
C
A
T
T
G
A/T
G/C
C
C
T
T
A
G
G
T
G
A
T
A
G
A
T
C
G
T
T
G
A
T/A
G
T
A
G/A
T
G
A
G
G
T
A
A
C
G
C
T
G
T
C
T
C
G
A
A
A
T
G
A
C
G
C
T
G
T
T
T
G
A
T
A
T
C
T
G
A
T
A
G
T
T
T
A
C
C
T
C
G
C
T
T
T
A
G
T
C
G
G
G
T
T
G
G
G
C
A
C
T
G
G
T
C
G
A
T
T
A
G
T
C
T
A/C
A
A
A
A
T
T
G
T
C
C
A
C/T
T
T/C
A
T
T
C
A
G
A
G
C
C
A
C
G
T
C
A
C
T
C
T/G
T
T
C
A
G
T
G
C
A
T
G
G
A
G
C
C/A
T/A
T
T
T
T/C
A
A
A
A
T
T
A
C
A
C
C
G
T
A
T
T
G
T
G
A
C
A
T
A
T
G
T
C
G
G
T
T
G
A
G
T
G
C/A
T
G
G
T
G
T
C
A
C
C
T
T
T
G
T
G
A
T
A
A
C
G
T
C
C
G
A
A
T
G
T
G
A
A/G
G
T
G
A
G
C
T
T
T
C/G
G/A
G
A
T
A
A
C
G
C
C
T
G
C
G
A
A
T
G
G
G
T
T
C/T
C
C
T
T
A
A
A/C
C/A
T
C
T
G
C
A
T
G
T
T
G
G
A
G
G
C
A
T
G
C
A
A
A
G
C
G
C
A
G
C
T/C
C
G/T
C
G
T
T
G
A
C
T
C
A
C
C
T
A
T
T
G
G
G
A
A
G
A
A
G
G
A
T
C/A
T
C
A
G
G
A
T
C
T
G
T
A/C
C/T
A
G
A
A
G
C
G
A
T
G
T
T
G
C
T
G
G
G
G
G
C
G
G
A
C
A
T
G
C
C/T
T
G
G
C
C
C
C/T
A
G
T
A
A
G
C
C
T
G
C
T
G
G
A/G
C/T
C
T
A
A
T
A
T
G
G/A
C
T
T
T
C
T
G/A
T
A
G
C
A
A
C
T/A
G/A
T
T
G
C
G
A
C
C/T
G
A
G/C
G/A
G
A
C
C
G
A
G
A
C
T
T
G
G
G
A
A
T
A
G
C
A/C
T
C
T
C
T/A
T
G
T
G
C
A
A
G
G
C
C
G
C
C
G
A
A
A
T
A
A
A
A
G
T
T
A
C
A
T
G
G
A
C
T
C
A
C
A
C
G
C
C/T
T/C
C/T
C
A
A
A
A
T
G
C
C
A
T
T
T
G
T
T
A
A
T
A
G
T
T
T
C/T