Variant Visualizer (Variants)

Submit Data | Help | Video Tutorials | News | Publications | Download | REST API | Citing RGD | Contact

Sequence Annotation

Assembly Rnor_6.0

Conservation

Genes ( + )

Genes ( - )

Rnor 6.0

HXB20/IpcvMcwi (2020)

.998	.0	.004	.0	.0	.001	.0	.057	.0	.001	.005	--	--	--	.0	.0	.0	.004	.005	.0	.017	.0	.009	.0	.001	.21	.0	.005	.001	.001	.12	.0	.0	.002	.008	.065	.0	.008	.038	.076	.002	.007	.083	.002	.02	.056	.003	.004	.015	.002	.003	.007	.01	.026	.118	.589	.01	.005	.001	.004	.005	.011	.021	.007	.0	.021	.003	.008	.003	.055	.005	.005	.002	.002	.014	.009	.0	.018	.001	.003	.017	.005	.174	.001	.126	.004	.006	.002	.259	.239	.138	.033	.032	.135	.23	.334	.143	.115	.138	.0	.356	.071	.002	--	.051	.072	.025	.054	.0	.04	.1	.001	.003	.0	.001	.0	.002	.001	.0	.054	.174	.003	.0	.002	.001	.015	.012	.018	.007	.0	.0	.001	.001	.004	.023	.005	.001	--	--	.006	.002	.001	.002	.001	.059	.03	.004	.014	.016	.015	.007	.025	.075	.0	.002	.133	.004	.0	.0	.0	.031	.0	.0	.027	.0	.0	.001	.002	.002	.001	.002	.0	.87	.007	.02	.012	.023	.002	.007	.0	.0	.0	.001	.932	.0	--	.0	.0	.564	.036	.001	.013	.017	.052	.058	.013	.557	--	.566	.355	.162	.16	.01	.004	.015	.026	.094	.022	.013	.1	.71	.0	.002	.007	.262	.001	.001	.001	.007	.002	.001	.0	.007	.0	.014	.007	.001	.036	.016	.006	.0	.0	.0	.0	.0	.0	.001	.001	.0	.059	.005	.0	.723	.998	.998	1.0	1.0	.987	.985	1.0	.089	.307	.639	.671	.324	.479	.602	.001	.1	.526	.01	.003	.0	.0	.0	.001	.0	.001	.0	.001	.002	--	--	.177	.008	.002	.007	.001	.0	.0	.009	.022	.01	.0	.0	.0	.002	.004	.003	.001	.075	.069	.052	.047	.006	.044	.004	.012	.023	.023	.023	.013	.0	.003	.0	.027	.025	.015	.005	.019	.006	.0	.001	.998	.913	.743	1.0	.042	.101	.262	--	--	.029	.002	.003	.002	.002	.0	.0	.001	.0	.0	.0	.0	.025	.011	.269	.322	.002	.411	.702	.018	.018	.387	.054	.044	.002	.001	.358	.002	.009	.107	.0	.001	.004	.0	.009	--	--	.015	.028	.371	.103	.004	.068	.0	.172	.01	.009	.038	.001	.016	.006	.07	.002	.068	.005	.001	--	--	--	--	--	--	--	.155	.981	.978	.008	.018	.002	.004	.481	.083	.029	.04	.01	.0	.005	.003	.525	.461	.006	.018	.0	.142	.101	.58	.368	.388	.483	.148	.15	.522	.007	.0	.115	.0	.003	.0	.0	.0	.001	.001	.518	1.0	.008	.047	.004	.011	.0	.0	.0	.154	.0	.0	.007	.001	.009	.13	.319	.721	.004	.001	.019	.006	.0	.0	.001	.064	.01	.0	.0	.0	.0	.007	.0	.001	.095	.07	.005	.003	.0	.0	.0	.006	.0	.0	.002	.0	.0	.054	.57	.805	.0	.003	.0	.0	.0	.759	.001	.007	.1	.111	.121	.002	.004	.29	.004	.001	.0	.012	.036	.001	.0	.041	.0	.001	.002	.0	.0	.002	.0	.96	.0	.005	.001	.0	.0	.0	.0	.017	.03	.002	.002	.001	.002	.007	.0	.637	.002	.0	.611	.0	.002	.0	.924	.001	.281	.004	.0	.008	.0	.001	.0	.037	.004	.004	.004	.0	.0	.001	.008	.007	.009	.893	.0	.0	.0	.0	.0	.226	.997	.028	.006	.006	.192	.016	.0	.212	.265	.001	.005	.0	.0	.004	.041	.001	.005	--	.0	.001	.0	.0	.0	.0	.099	.032	.009	.001	.004	.002	.0	.001	.0	.003	--	--	--	.045	.01	1.0	.004	.029	.0	.001	.928	.0	.011	.006	.007	.0	.001	.185
Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9										Nedd9
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	LOC103694060										LOC103694060										LOC103694060										LOC103694060										LOC103694060					LOC102548345										LOC102548345										LOC102548345										LOC102548345										LOC102548345										LOC102548345										LOC102548345										LOC102548345										LOC102548345										LOC102548345										LOC102548345										LOC102548345										LOC102548345	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
A	T	T	G	A	T	G	C	G	C	A	G	T	G	A	C	A	G	G	T	T	G	T	G	A	G	G	G	G	C	T	G	C	A	T	46	C	T	T	A	T	G	3	G	A	C	G	C	T	A	T	T	G	T	G	T	C	T	A	A	G	G	T	T	-	G	A	G	G	G	T	T	A	T	C	C	T	C	A	A	G	C	A	G	C	4	G	C	G	3	C	A	A	A	G	T	G	C	G	T	T	G	2	T	T	T	C	T	T	T	G	T	A	G	C	A	A	A	C	-	G	C	G	T	A	A	C	C	C	A	C	G	C	A	T	T	C	G	-	A	T	G	G	T	T	A	-	G	C	C	T	C	G	-	A	T	T	A	A	T	C	A	C	G	G	G	G	C	G	A	C	C	A	A	C	A	2	-	-	C	C	C	A	G	T	T	G	G	T	T	T	G	G	C	4	C	T	2	T	C	2	G	A	C	A	A	A	G	C	C	G	A	T	-	C	G	C	C	A	C	-	G	T	G	T	T	C	T	G	T	A	G	G	A	-	-	A	A	C	A	G	C	A	-	G	G	-	C	C	2	G	A	A	C	T	10	T	A	A	G	G	T	T	C	G	T	G	A	C	T	C	-	6	G	A	T	C	T	A	13	G	A	G	T	A	C	A	T	G	G	T	T	C	A	A	A	C	G	G	G	G	T	T	G	C	T	C	A	C	A	A	G	G	A	G	A	T	A	A	T	-	A	2	C	2	2	A	10	C	C	C	A	G	G	T	G	A	A	A	C	T	C	A	C	G	A	A	-	C	A	T	A	G	G	C	A	A	G	C	C	C	-	C	-	2	G	C	A	A	-	G	T	T	G	A	T	G	C	A	T	G	A	G	G	G	A	A	T	A	A	A	T	A	G	-	A	A	C	A	G	G	-	T	C	C	C	-	-	T	-	T	T	T	-	-	C	-	A	G	-	C	T	C	C	T	C	C	C	G	G	A	G	A	-	G	G	72	A	T	G	A	T	T	G	C	C	G	T	6	2	C	A	T	A	A	T	T	A	A	C	C	T	T	T	C	A	T	A	C	T	C	C	G	-	C	-	A	4	-	A	A	G	2	T	2	T	A	A	G	G	A	T	36	A	-	G	C	A	T	A	T	T	A	A	T	C	C	A	C	-	C	2	T	T	A	G	G	C	A	G	2	A	T	T	A	A	A	C	-	-	A	A	A	2	A	-	G	4	A	T	G	4	C	T	G	A	G	T	A	A	T	T	A	G	G	A	A	-	C	C	T	T	T	C	C	A	-	C	A	-	T	T	C	A	A	T	G	A	2	T	T	T	C	G	C	G	-	2	A	A	-	G	-	-	A	G	G	A	A	A	C	T	G	2
23,011,513	23,015,618	23,018,222	23,018,568	23,018,572	23,019,003	23,019,018	23,019,116	23,019,549	23,019,559	23,019,630	23,025,174	23,025,198	23,025,217	23,025,638	23,025,959	23,026,307	23,026,367	23,026,382	23,026,429	23,026,472	23,026,534	23,026,623	23,026,773	23,026,785	23,027,037	23,027,374	23,027,471	23,027,533	23,027,579	23,027,593	23,027,634	23,027,686	23,027,712	23,027,995	23,028,105	23,028,270	23,028,365	23,028,394	23,028,466	23,028,667	23,028,733	23,028,777	23,029,468	23,029,571	23,029,577	23,029,916	23,029,922	23,029,999	23,030,015	23,030,019	23,030,026	23,030,034	23,030,040	23,030,285	23,030,464	23,030,691	23,030,725	23,030,940	23,030,956	23,030,958	23,030,961	23,030,973	23,031,018	23,031,176	23,031,192	23,031,209	23,031,243	23,031,249	23,031,337	23,031,449	23,031,521	23,031,523	23,031,524	23,031,553	23,031,557	23,031,570	23,031,707	23,031,775	23,031,813	23,031,860	23,031,872	23,032,090	23,032,361	23,032,509	23,032,559	23,032,629	23,032,661	23,032,745	23,032,747	23,032,900	23,032,952	23,032,955	23,032,992	23,033,024	23,033,052	23,033,194	23,033,202	23,033,242	23,033,561	23,033,635	23,033,646	23,033,687	23,033,790	23,033,823	23,033,984	23,034,023	23,034,031	23,034,242	23,034,291	23,034,577	23,034,774	23,034,966	23,034,976	23,035,507	23,035,549	23,035,592	23,035,767	23,035,800	23,035,823	23,035,847	23,035,946	23,036,025	23,036,165	23,036,176	23,036,276	23,036,313	23,036,343	23,036,384	23,036,406	23,036,493	23,036,510	23,036,545	23,036,592	23,036,635	23,036,742	23,036,751	23,036,843	23,036,911	23,036,951	23,037,067	23,037,069	23,037,103	23,037,107	23,037,143	23,037,307	23,037,334	23,037,401	23,037,406	23,037,407	23,037,502	23,037,624	23,038,056	23,038,191	23,038,376	23,038,545	23,038,667	23,038,765	23,038,770	23,038,806	23,039,046	23,039,166	23,039,281	23,039,307	23,039,391	23,039,393	23,039,602	23,039,659	23,039,670	23,039,786	23,039,940	23,040,077	23,040,158	23,040,226	23,040,307	23,040,321	23,040,336	23,040,340	23,040,356	23,040,384	23,040,395	23,040,410	23,040,457	23,040,832	23,041,232	23,041,630	23,041,999	23,042,006	23,042,192	23,042,210	23,042,373	23,042,436	23,042,439	23,042,596	23,042,783	23,042,787	23,042,906	23,043,108	23,043,248	23,043,302	23,043,471	23,043,473	23,043,495	23,043,499	23,043,514	23,043,527	23,043,679	23,043,893	23,043,896	23,043,941	23,044,099	23,044,130	23,044,141	23,044,145	23,044,181	23,044,212	23,044,228	23,044,229	23,044,235	23,044,286	23,044,294	23,044,295	23,044,310	23,044,313	23,044,451	23,044,494	23,044,607	23,044,858	23,044,974	23,045,147	23,045,371	23,045,546	23,045,627	23,045,651	23,045,793	23,045,794	23,045,904	23,045,969	23,046,113	23,046,359	23,046,521	23,046,618	23,046,734	23,046,873	23,046,924	23,046,926	23,046,945	23,046,954	23,046,955	23,047,081	23,047,135	23,047,149	23,047,153	23,047,154	23,047,202	23,047,246	23,047,300	23,047,314	23,047,366	23,047,406	23,047,451	23,047,483	23,047,533	23,047,689	23,047,704	23,047,727	23,047,771	23,047,781	23,048,116	23,048,178	23,048,287	23,049,442	23,049,492	23,049,711	23,049,737	23,049,756	23,049,800	23,049,874	23,049,933	23,049,959	23,050,061	23,050,066	23,050,081	23,050,085	23,050,097	23,050,154	23,050,236	23,050,307	23,050,322	23,050,344	23,050,640	23,050,762	23,050,871	23,050,875	23,051,125	23,051,221	23,051,270	23,051,343	23,051,347	23,051,351	23,051,355	23,051,643	23,051,673	23,051,682	23,051,686	23,051,690	23,051,692	23,051,694	23,051,907	23,052,119	23,052,977	23,053,190	23,053,409	23,053,729	23,053,738	23,053,742	23,053,760	23,057,416	23,057,421	23,057,434	23,057,471	23,057,508	23,057,650	23,057,657	23,057,662	23,057,670	23,058,624	23,060,687	23,060,761	23,060,897	23,061,044	23,061,174	23,061,342	23,061,467	23,061,514	23,061,586	23,061,631	23,061,639	23,061,993	23,062,840	23,063,439	23,063,504	23,064,092	23,064,183	23,064,445	23,064,484	23,064,815	23,064,937	23,065,138	23,065,226	23,065,611	23,065,750	23,066,121	23,066,410	23,066,822	23,067,002	23,067,322	23,067,734	23,067,742	23,068,188	23,068,190	23,068,521	23,069,100	23,069,180	23,069,561	23,069,647	23,070,071	23,070,197	23,070,204	23,070,214	23,070,425	23,072,054	23,072,065	23,078,279	23,079,942	23,079,957	23,080,603	23,080,615	23,081,322	23,081,461	23,081,480	23,081,901	23,083,097	23,083,282	23,083,431	23,083,709	23,083,767	23,083,834	23,083,879	23,083,888	23,084,122	23,084,144	23,084,272	23,084,495	23,084,505	23,084,691	23,084,975	23,085,303	23,085,446	23,085,720	23,085,863	23,085,865	23,085,902	23,086,117	23,086,901	23,087,099	23,088,189	23,088,195	23,088,201	23,088,213	23,088,221	23,088,230	23,088,232	23,088,254	23,088,271	23,088,282	23,088,291	23,088,463	23,089,372	23,089,442	23,089,457	23,089,657	23,089,661	23,089,935	23,090,194	23,090,248	23,090,489	23,090,602	23,090,739	23,091,269	23,091,998	23,092,071	23,092,609	23,092,842	23,092,963	23,093,023	23,093,134	23,093,220	23,093,354	23,093,362	23,093,367	23,093,378	23,093,437	23,093,619	23,093,671	23,093,921	23,094,055	23,094,272	23,094,324	23,094,447	23,094,521	23,094,813	23,094,815	23,095,155	23,095,268	23,095,632	23,095,968	23,096,136	23,096,718	23,096,872	23,096,996	23,096,997	23,097,001	23,097,008	23,097,009	23,097,134	23,097,178	23,097,214	23,097,318	23,097,332	23,097,336	23,097,387	23,097,479	23,097,603	23,100,020	23,100,030	23,101,639	23,104,561	23,104,567	23,104,856	23,105,548	23,105,661	23,106,171	23,106,173	23,106,175	23,106,474	23,106,572	23,106,591	23,106,625	23,106,661	23,106,740	23,106,849	23,106,904	23,107,461	23,107,707	23,107,856	23,107,937	23,107,938	23,108,422	23,108,863	23,108,988	23,109,247	23,109,654	23,109,857	23,109,903	23,110,903	23,111,829	23,112,081	23,112,261	23,112,268	23,112,273	23,112,375	23,112,733	23,112,879	23,112,904	23,113,429	23,114,602	23,114,908	23,114,980	23,115,059	23,115,097	23,115,131	23,115,482	23,115,742	23,115,994	23,116,009	23,116,188	23,116,499	23,116,564	23,118,088	23,118,887	23,119,016	23,119,083	23,119,296	23,119,746	23,119,762	23,120,219	23,120,221	23,120,441	23,121,803	23,121,818	23,122,177	23,126,096	23,126,097	23,126,120	23,127,332	23,127,732	23,128,777	23,129,031	23,129,059	23,129,108	23,129,500	23,129,830	23,130,172	23,131,321	23,131,374	23,132,134	23,132,659	23,133,846	23,134,967	23,136,503	23,137,380	23,138,991	23,139,388	23,140,076	23,142,113	23,142,214	23,142,512	23,143,188	23,143,971	23,144,460	23,146,212	23,146,454	23,146,634	23,147,107	23,147,120	23,148,438	23,148,517	23,161,977	23,162,159	23,163,335	23,163,527	23,163,776	23,164,277	23,164,492	23,164,901	23,165,599	23,165,784	23,165,889	23,166,264	23,166,803	23,168,122	23,169,545	23,171,699	23,172,329	23,172,370	23,173,002	23,176,308	23,176,500	23,178,735	23,178,953	23,179,065	23,179,133	23,179,341
G	C	C	A	C	C	A	T	T	T	G	A	C	A	G	A	G	A	T	C	A	A	G	T	G	T	A	A	A	T	C	A	T	G	C	-	T	C	C	-	C	A	-	A	G	T	T	-	C	G	C	G	A	C	A	C	T	C	G	C	A	A	C	C	2	T	G	A	C	A	C	A/C	C	A	T	T	G	T	G	G	A	T	G	A	T	-	T	A	-	-	T	G	G	T	A	C	A	A	A	C	C	A	-	G	C	C	A	C	A	A	A	C	G	A	A	G	G	G	T	G	A	A	A	G	C	C	T	-	G	C	G	A	T	G	C	C	T	A	9	G	C	A	A	C	C	G	C	A	T	T	C	T	T	G	G	C	C	T	C	C	T	T	T	A	A	A	T	T	A	C	G	T	G	G	T	T	-	2	7	G	T	T	G	A	C	C	A	A	C	A	G	A	A	T	-	G	G	-	-	T	-	C	G	A	T	G	T	A	A	T	A	G	C	C	T	A	T	T	G	T	8	T	G	A	C	G	T	-	A	C	G	C	A	G	A	GC/C	G	G	T	G	A	T	G	-/2	G/C	G/C	2	C/T	A	-	A	A/T	G	C/T	C	-	G	-	G	T	A	A	C	G	A	C	-	G	T	G	T	T	-	A	C	-	T	C	C	-	A	T	A	C	-	T	G	C	A	C	A	C	G	G	G	G	T	A	A	A	A	C	C	C	A	C	A	T	T	G	G	A	C	G	A	G	C	-	-	-	2	-	-	G	-	-	G	-	A	G	T	G	A	A	C	A	G	G	-	T	A	T	G	T	A	C	G	C	T	G	G	T	A	C	T	G	G	C	G	G	T	A	T	A	-	T	T	G	C	3	A	-	C	A	-	-	A	T	C	C	A	G	A	A	C	T	C	C	G	G	G	C	G	A	A	T	G	T	-	A	G/T	-/2	C	T	A	G	A	A	-	C	-	-	-	C	C	-	C	G	A	G	A	C	T	T	C	G	T	T	A	A	G	A	G	A	A	T	-	C	C	T	G	A	C	A	T	T	A	A	-	-	-	G	C	G	C	C	C	G	G	T	T	C	C	G	T	G	C	G	-	C	T	A	A	G	A	C	G	-	4	-	C	A	-	A	-	C	G	-	A	A	G	C	-	G	3	T	T	G	C	C	C	G	G	G	C	-	T	G	T	14	T	-	C	C	C	A	A	T	G	A	-	G	C	C	G	G	G	G	C	T	G	G	G	-	G	3	-	-	C	G	A	-	-	G	A	G	A	C	G	G	C	C	T	C	A	G	T	2	T	G	C	C	G	T	T	G	4	T	G	6	C	C	T	G	G	C	A	T	-	G	A	C	T	T	T	A	30	-	G	C	A	A	3	A	G	A	A	G	G	-	A	C	C	2/-