Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 229,997 (bp)   Positions: 488
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
.0
.001
.005
.0
.001
.246
.004
.007
.001
.01
.006
.511
.0
.0
.154
.001
.002
.001
.008
.131
.059
.028
.0
.0
.0
.068
.794
.027
.001
.0
.001
.002
.001
.001
.095
.026
.01
.001
.003
.004
--
.026
.019
.021
.085
.007
.001
.954
.996
.002
.004
--
.0
.0
.004
.021
.973
.0
.005
.005
.024
.004
.071
.009
.0
.001
.001
.001
.005
--
.003
.0
.021
.135
.005
.869
.0
.001
.0
.001
.003
.0
.0
.004
.018
.005
--
--
--
--
--
--
--
--
--
--
--
.001
.005
.081
.117
.043
.024
.0
.0
.0
.0
.012
.0
.005
.095
.006
.044
.002
.003
.002
.085
.028
--
--
--
.003
.99
.002
.0
.057
.0
.0
.0
.0
.505
.105
.002
.001
.002
.001
.078
.001
.087
.007
.004
.001
.08
.001
.008
.192
.0
.001
.481
.075
.142
.015
.001
.003
.001
.023
.007
.001
.001
.001
.0
.072
.144
.998
.004
.682
.0
.005
.121
.012
.015
.0
.0
--
.003
.001
.008
.007
.008
.017
.001
.013
.013
.064
.29
.261
--
--
--
--
.007
.002
.053
.008
.065
.059
.008
.041
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.032
.003
.002
.001
.001
.006
.012
.607
.001
.019
.015
.014
.007
.002
.0
.219
.001
.001
.0
.131
.033
.175
.552
.09
--
.009
.193
.015
.006
.215
.004
.0
.0
.001
.081
.007
.002
.0
.025
.011
.025
.147
.005
.001
.008
.713
.001
.025
.009
.001
.007
.049
.98
.007
.009
.01
.001
.015
.003
.0
.009
.001
.003
--
--
--
--
--
--
--
--
--
--
--
--
.01
.04
.0
.001
.044
.0
.002
.075
.047
.002
.003
.047
.007
.004
.009
.173
.578
.015
.0
.077
.026
.067
.004
.641
.003
.005
.024
.258
.404
.004
.015
.0
.008
.016
.007
.003
.001
.004
.001
.015
.002
.975
.919
.001
.0
.01
.005
.01
.512
.259
.001
.0
.028
.001
.108
.001
.0
.003
.002
--
--
.007
.007
.722
.08
.054
.001
.064
.0
.001
.028
.0
.04
.04
.012
--
.001
.02
.01
--
.033
.001
.017
.001
.027
.024
.0
.004
.002
.008
.006
--
.005
.499
.001
.0
.001
.002
1.0
.0
.006
.0
.006
.0
.067
.0
.318
.026
.125
.103
.022
.056
.006
.0
.718
.0
.019
.011
.003
.229
.008
.009
.741
.0
.102
.968
.026
.0
.002
.006
.566
.0
.0
.001
.052
.008
.001
.054
.008
.005
.0
.001
.001
.0
.376
.002
.879
.927
.908
.843
.0
.0
.007
.047
.193
.991
.01
.004
.0
.014
.013
.003
.0
--
.033
.001
.0
.0
.0
.0
.004
.0
.0
.0
.995
.0
.006
.01
.244
.017
.006
.0
.04
.0
--
.0
.008
.024
.258
.009
.0
.003
.01
.01
.0
.037
.019
.99
.995
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
Ncoa2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
-
C
-
T
G
A
-
A
G
T
T
G
A
-
G
T
C
G
T
C
T
G
T
-
A
G
G
-
G
T
T
2
-
-
A
T
G
T
-
T
18
T
-
G
A
G
6
T
G
-
C
T
-
G
2
A
C
-
C
C
G
C
15
C
G
-
T
C
T
A
C
2
-
C
A
A
T
2
T
T
C
C
G
G
C
-
C
C
C
C
G
C
C
G
C
-
T
A
A
A
A
G
-
T
T
G
C
7
G
A
T
G
C
7
T
C
G
G
-
A
G
T
A
T
C
A
C
T
G
C
2
G
T
C
C
G
C
A
T
C
A
T
T
G
8
A
A
T
C
-
C
A
G
T
C
C
G
C
G
C
A
A
G
T
A
G
C
G
C
G
T
T
A
2
A
-
2
2
G
17
G
C
T
C
-
G
A
-
A
G
T
C
C
C
C
T
C
G
T
T
G
C
G
A
C
A
G
A
G
T
T
-
T
T
G
C
C
C
C
C
G
G
C
T
A
G
C
C
C
C
G
A
G
5
A
-
A
11
T
A
-
-
-
T
A
C
C
C
A
C
T
C
A
A
-
T
G
C
A
C
T
T
A
A
G
G
C
A
T
-
A
3
G
G
T
T
C
T
2
C
G
G
A
A
C
G
C
G
A
A
G
A
A
G
C
T
G
3
7
C
A
A
T
G
A
C
-
G
T
A
T
C
T
A
C
C
T
C
T
C
A
5
-
G
C
G
C
G
C
C
T
A
A
C
2
T
G
C
A
-
T
T
G
G
T
G
C
C
C
A
C
G
A
T
C
T
4
G
G
T
G
G
G
G
A
G
-
T
C
C
C
A
A
T
3
G
-
G
A
G
A
T
G
-
-
G
C
G
G
T
A
T
G
A
C
G
C
9
G
G
A
A
T
A
T
A
T
T
C
G
A
G
T
6
C
C
T
A
A
T
A
T
T
12
-
A
-
G
A
T
G
C
T
T
A
G
C
G
C
G
T
A
-
4
T
C
C
G
G
C
-
C
T
G
G
A
A
C
A
G
G
T
T
G
G
G
G
C
T
A
A
A
T
2
G
A
-
-
A
A
T
A
-
A
G
T
C
-
  5,467,034
  5,468,317
  5,470,741
  5,471,686
  5,471,898
  5,472,988
  5,474,120
  5,475,132
  5,475,286
  5,475,969
  5,476,999
  5,477,828
  5,478,356
  5,478,358
  5,478,375
  5,481,216
  5,481,348
  5,481,402
  5,481,481
  5,481,516
  5,483,087
  5,483,686
  5,484,499
  5,484,505
  5,484,506
  5,485,912
  5,485,973
  5,486,167
  5,486,664
  5,486,671
  5,486,684
  5,486,686
  5,486,692
  5,487,156
  5,487,560
  5,488,166
  5,488,632
  5,488,923
  5,491,335
  5,492,762
  5,493,939
  5,494,546
  5,494,555
  5,495,236
  5,497,174
  5,497,391
  5,497,477
  5,498,200
  5,498,303
  5,499,841
  5,499,850
  5,500,784
  5,501,044
  5,501,358
  5,502,029
  5,502,245
  5,503,558
  5,506,357
  5,506,499
  5,506,570
  5,506,813
  5,506,838
  5,506,974
  5,507,524
  5,507,731
  5,509,682
  5,509,725
  5,510,230
  5,510,244
  5,510,945
  5,511,912
  5,511,966
  5,511,969
  5,512,062
  5,512,659
  5,513,120
  5,513,219
  5,513,802
  5,514,255
  5,514,928
  5,515,171
  5,515,318
  5,516,406
  5,516,528
  5,516,593
  5,516,604
  5,516,623
  5,516,628
  5,516,637
  5,516,643
  5,516,658
  5,516,677
  5,516,686
  5,516,689
  5,516,714
  5,516,750
  5,516,853
  5,516,883
  5,518,276
  5,518,356
  5,518,375
  5,518,526
  5,519,318
  5,519,579
  5,519,612
  5,520,058
  5,520,225
  5,520,545
  5,521,410
  5,521,479
  5,521,682
  5,521,726
  5,522,612
  5,523,232
  5,523,568
  5,524,490
  5,526,683
  5,526,696
  5,526,736
  5,526,741
  5,526,773
  5,526,865
  5,527,186
  5,527,470
  5,527,641
  5,527,790
  5,528,884
  5,528,891
  5,528,934
  5,529,012
  5,529,147
  5,530,456
  5,530,466
  5,530,648
  5,530,751
  5,530,764
  5,530,779
  5,530,843
  5,530,953
  5,531,896
  5,531,897
  5,532,155
  5,532,794
  5,533,009
  5,533,185
  5,533,278
  5,533,525
  5,534,384
  5,534,542
  5,534,888
  5,535,016
  5,535,062
  5,535,142
  5,535,193
  5,535,317
  5,535,472
  5,535,937
  5,536,041
  5,536,224
  5,536,755
  5,537,239
  5,537,784
  5,538,902
  5,539,537
  5,539,726
  5,539,761
  5,540,066
  5,540,439
  5,541,134
  5,541,878
  5,541,956
  5,542,153
  5,543,369
  5,544,063
  5,544,627
  5,544,631
  5,544,698
  5,544,702
  5,544,707
  5,545,396
  5,545,563
  5,545,906
  5,546,103
  5,546,257
  5,546,528
  5,546,532
  5,546,629
  5,546,742
  5,546,747
  5,546,755
  5,546,792
  5,547,492
  5,547,550
  5,547,674
  5,547,754
  5,547,755
  5,547,899
  5,547,974
  5,548,296
  5,548,339
  5,548,483
  5,548,484
  5,548,560
  5,548,588
  5,548,620
  5,548,669
  5,549,184
  5,550,158
  5,550,506
  5,550,923
  5,550,997
  5,551,259
  5,551,580
  5,551,642
  5,551,821
  5,552,357
  5,552,373
  5,552,486
  5,552,495
  5,552,571
  5,552,615
  5,552,654
  5,552,664
  5,552,706
  5,552,762
  5,552,763
  5,552,960
  5,552,974
  5,552,993
  5,553,084
  5,553,155
  5,553,240
  5,553,576
  5,554,595
  5,554,710
  5,555,055
  5,555,338
  5,555,517
  5,556,517
  5,556,728
  5,556,796
  5,556,984
  5,557,069
  5,557,584
  5,557,890
  5,558,660
  5,558,666
  5,558,695
  5,560,581
  5,560,759
  5,561,610
  5,562,056
  5,562,407
  5,562,847
  5,563,430
  5,563,883
  5,563,981
  5,564,100
  5,564,431
  5,565,177
  5,565,565
  5,565,731
  5,565,923
  5,566,547
  5,566,647
  5,566,655
  5,566,664
  5,566,825
  5,566,839
  5,566,843
  5,566,849
  5,566,896
  5,566,900
  5,566,902
  5,566,903
  5,567,215
  5,567,443
  5,567,876
  5,567,879
  5,567,887
  5,567,901
  5,567,977
  5,568,087
  5,568,262
  5,568,921
  5,571,183
  5,571,186
  5,571,556
  5,571,569
  5,571,810
  5,572,842
  5,572,940
  5,573,478
  5,573,549
  5,573,950
  5,574,158
  5,575,119
  5,575,218
  5,575,776
  5,576,123
  5,577,104
  5,577,844
  5,579,876
  5,580,015
  5,580,023
  5,580,135
  5,580,225
  5,580,983
  5,581,329
  5,581,396
  5,581,528
  5,582,247
  5,582,260
  5,582,545
  5,582,599
  5,583,072
  5,583,100
  5,583,134
  5,583,634
  5,584,606
  5,584,700
  5,584,725
  5,584,783
  5,586,007
  5,586,123
  5,586,354
  5,587,705
  5,588,534
  5,589,500
  5,589,856
  5,590,574
  5,590,611
  5,590,839
  5,591,155
  5,591,214
  5,591,898
  5,592,277
  5,592,471
  5,592,753
  5,593,273
  5,593,377
  5,593,837
  5,593,949
  5,594,743
  5,595,257
  5,596,053
  5,596,872
  5,596,934
  5,597,447
  5,598,105
  5,598,473
  5,598,582
  5,599,458
  5,599,576
  5,599,904
  5,600,039
  5,600,484
  5,601,580
  5,601,628
  5,602,504
  5,602,701
  5,604,572
  5,604,632
  5,604,803
  5,605,146
  5,605,747
  5,605,813
  5,606,446
  5,606,622
  5,608,811
  5,632,888
  5,633,267
  5,634,727
  5,634,846
  5,634,848
  5,635,276
  5,635,906
  5,636,031
  5,636,836
  5,637,083
  5,638,363
  5,638,435
  5,638,525
  5,639,145
  5,640,778
  5,641,834
  5,642,014
  5,643,853
  5,644,184
  5,644,425
  5,645,004
  5,646,171
  5,646,176
  5,646,442
  5,646,530
  5,646,767
  5,646,805
  5,646,837
  5,646,850
  5,647,915
  5,648,024
  5,648,774
  5,649,731
  5,649,996
  5,650,337
  5,651,018
  5,651,076
  5,651,312
  5,651,443
  5,651,929
  5,652,059
  5,652,347
  5,652,774
  5,652,916
  5,653,125
  5,654,181
  5,654,429
  5,654,926
  5,655,056
  5,655,280
  5,655,973
  5,656,610
  5,657,662
  5,657,881
  5,657,894
  5,657,982
  5,658,742
  5,658,932
  5,659,392
  5,659,606
  5,660,855
  5,661,601
  5,662,035
  5,662,343
  5,662,798
  5,663,237
  5,663,240
  5,663,245
  5,663,246
  5,664,438
  5,664,555
  5,664,644
  5,664,780
  5,664,859
  5,665,309
  5,666,973
  5,667,179
  5,667,639
  5,668,545
  5,670,320
  5,670,743
  5,671,271
  5,671,833
  5,672,061
  5,672,466
  5,672,495
  5,672,712
  5,673,089
  5,674,443
  5,675,304
  5,675,503
  5,675,690
  5,676,575
  5,677,454
  5,677,590
  5,678,137
  5,678,281
  5,678,311
  5,678,343
  5,679,194
  5,679,636
  5,679,683
  5,680,272
  5,680,433
  5,682,644
  5,683,827
  5,684,324
  5,684,514
  5,686,572
  5,686,710
  5,686,882
  5,689,087
  5,689,239
  5,689,899
  5,693,090
  5,693,694
  5,694,806
  5,696,494
4/C
G
2
C
A
C
-/2
G
A
A
-
T
G
C
G/C
C
A
C
C
T
C
T
C
22
-
A
A
9
T
G/G
G
2/-
G/G
13
T
C
T
C
4
G
-
C
A
A
G
A
-
G
A
8
T
C
T
A
-
G
T
2
T
T
A
T
-
T
A
2
C
T
C
G
A
-
4
T
C
C
C
-
A
C
G
T
A
A
T
A
A
T
G
T
A
T
T
T
T
T
C
G
C
C
C
A
6
C
C
A
T
-
A
G
C
A
A
-
C
T
-
-
G
-
-
G
T
-
T
G
T
C
A
-
-
T
C
T
T
A
T
T
-
T
G
C
C
A
-
G
G
C
T
G
G
G
A
G
G
T
A
G
A
T
G
G
C
C
G
A
T
A
A
-
C
C
G
-
G
G
-
2/-
C
-
A
T
G
T
2
A
G
T
T
A
C
A
G
G
T
G
G
C
C
A
G/C
C/A
A
C
G
G
G/A
G
G/A
A
C
23
C
C
C
A
A
T
T
T
A
C
G
C
T
A
T
T
G
T
C
-
A
-
T
A
C
-
C
G
T
G
2
C
G
T
T
T
T
T
A
T
G
T
A
C
T
T
G
T
G
C
G
T
C
A
T
G
C
G
G
-
T
T
G
G
G
C
2/-
C/T
G/A
A
C
G
T
A
G
G/C
A/G
G
C
C
T
-
T
C
A
-
-
A
G
G
C
A
-
T
A
T
C
G
-
T
C
G
T
T
C
T
A
T
G
-
A
A
T
A
A
A
T
T
C
G
G
A
2/-
C
A
T
C
10
G
G
A
A
A
A
G
T
T
G
A
A
T
C
T
G
-
A
A
C
A
A
A
A
C
A
12
C
A
G
T
G
G
-
-
A
9
A
G
T
G
C
A
26
4
C
T
T
A
C
T
C
C
G
T
C
A
-
C
A
G
G
G
G
G
C
A
G
A
A
G
A
C
-
T
T
C
G
G
A
G
C
C
-
A
G
10
A
G
A
A
T
C
C
G
G/T
C/T
G/T
C/T
A
C
G
2
-
C
T
T
A
A
T
T
T
-
A
C
G
G
T
G
A
A
C
G
A
C
A
C
G
C
G
G
C
C
-
T
C
A
T
G
G
C
G
T
G
C
T/-
T
2