Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 24,750 (bp)   Positions: 116
Conservation 
Genes ( + ) 
Genes ( - ) 
Genes ( - ) 
Rnor 6.0  
ACI/EurMcwi (MCW) 
.085
.001
.003
.003
.002
.228
.103
.033
.124
.01
.025
.018
.934
.649
.318
.458
.099
.922
.017
.587
.999
.996
--
--
--
--
--
--
--
.856
--
--
--
--
--
--
--
--
--
--
--
.669
.012
.477
--
--
--
--
--
--
--
--
--
--
--
--
--
.311
.956
.929
.929
.001
--
.007
.109
.064
.085
.024
.184
.197
.04
.003
.056
.054
--
.027
.342
.084
.001
.002
.183
.867
.915
.173
.765
.004
.551
.004
.002
.012
.133
.077
.005
.003
.083
.039
.004
.005
.042
.006
.016
.004
.003
.003
.001
.0
.201
.129
.002
.006
.006
.06
.056
.01
.019
.232
--
--
--
--
--
Emilin1-ps1
Emilin1-ps1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Nat8f5
Nat8f5
Nat8f5
Nat8f5
Nat8f5
Nat8f5
Nat8f5
Nat8f5
Nat8f5
Nat8f5
Nat8f5
Nat8f5
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
G
T
T
T
A
T
G
G
T
C
C
C
C
G
A
T
T
T
C
A
C
T
A
T
G
G
C
T
A
T
C
A
G
G
C
T
A
A
C
A
C
C
C
T
T
G
T
A
T
T
T
A
C
C
G
G
G
G
T
G
G
A
A
C
C
A
T
A
G
C
T
T
T
T
T
A
T
G
A
G
G
A
A
G
G
G
A
G
T
G
T
G
A
G
T
C
T
G
C
G
T
G
A
G
C
A
G
T
A
C
C
A
C
T
T
  117,506,985
  117,507,772
  117,508,226
  117,508,227
  117,508,479
  117,509,413
  117,509,520
  117,509,641
  117,509,704
  117,509,903
  117,509,909
  117,509,914
  117,510,069
  117,510,758
  117,511,051
  117,511,071
  117,511,220
  117,511,247
  117,511,349
  117,512,014
  117,512,136
  117,512,215
  117,512,961
  117,512,967
  117,513,268
  117,513,281
  117,513,346
  117,513,608
  117,513,732
  117,513,963
  117,514,170
  117,514,178
  117,514,180
  117,514,188
  117,514,214
  117,514,217
  117,514,235
  117,514,257
  117,514,260
  117,514,263
  117,514,501
  117,514,566
  117,514,768
  117,514,940
  117,515,068
  117,515,508
  117,515,793
  117,515,794
  117,515,962
  117,516,910
  117,516,915
  117,518,100
  117,518,146
  117,519,077
  117,519,183
  117,519,411
  117,519,513
  117,519,555
  117,519,643
  117,519,661
  117,519,956
  117,520,132
  117,520,151
  117,520,296
  117,520,387
  117,520,429
  117,520,566
  117,520,895
  117,521,328
  117,521,513
  117,522,103
  117,522,118
  117,522,317
  117,522,559
  117,522,781
  117,522,880
  117,522,938
  117,523,612
  117,523,920
  117,523,977
  117,524,802
  117,524,965
  117,525,051
  117,525,252
  117,525,419
  117,525,649
  117,526,040
  117,526,200
  117,526,513
  117,527,450
  117,527,494
  117,527,534
  117,527,560
  117,527,960
  117,528,136
  117,528,161
  117,528,190
  117,528,332
  117,528,347
  117,528,813
  117,529,266
  117,529,566
  117,529,571
  117,529,575
  117,529,579
  117,529,592
  117,529,612
  117,529,617
  117,529,665
  117,529,869
  117,529,893
  117,530,012
  117,530,013
  117,530,378
  117,531,081
  117,531,248
G
A
C
C
C
G
C
T
C
C
T
T
T
G
A
G
C
C
C
T
G
T
C
C
T/A
G/T
A
T
C
G
T/C
C/T
A/G
G/C
G/A
C/A
T/G
A/G
A/G
C/T
G
A
T
G
G
C
A
C
G
T/C
T/C
G
G
T
T
A
C
A
T
G
T
A
G
G
T
T
G
A
G
A
G
C
C
C
C
C
G
C
A
G
A
A
G
C
A
A
A
T
A
C
A
C
A
G
A
C
T
G
A
T
C
C
T
G
A
C/T
C
T
C
G
T
T
G
A
C
C