Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 84,571 (bp)   Positions: 110
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
F344/NCrl (RGD) 
.001
.0
.0
.0
.0
.001
.0
.0
1.0
.0
.01
.0
.0
.0
.0
.0
.444
.007
.001
.022
.0
.0
.0
.046
--
.002
.0
.0
.0
.001
.03
.263
1.0
.0
.0
.005
.015
.0
.0
.001
.014
.0
.023
.218
.116
.024
.023
.001
.005
.003
.151
.006
.01
.004
.133
.032
.0
.0
.001
.0
.216
.071
--
--
.002
.001
.075
.018
.011
.051
.0
.003
.025
.043
.073
.113
.016
.017
.01
.009
.108
.092
.22
.998
.004
.0
.0
.001
.001
.003
.0
.042
.036
.008
.007
.0
.0
--
.0
.008
.996
.0
.036
.006
.002
.368
.543
--
.055
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
LOC102548499
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Mtr
Mtr
Mtr
Mtr
Mtr
Mtr
Mtr
Mtr
Mtr
Mtr
Mtr
G
G
C
T
C
A
T
C
G
T
C
G
A
C
C
T
A
G
C
T
T
C
A
T
A
T
A
G
T
T
C
G
A
A
G
T
T
C
T
A
C
G
A
A
G
G
T
C
T
T
T
A
T
C
G
T
G
C
A
A
A
C
T
A
A
T
G
C
T
C
G
T
T
A
A
T
G
G
C
C
G
T
A
C
T
G
C
T
T
C
C
T
T
G
A
G
T
G
G
G
T
A
A
T
A
T
A
G
A
A
  66,212,680
  66,214,456
  66,215,951
  66,216,240
  66,218,078
  66,218,113
  66,218,321
  66,218,528
  66,218,646
  66,218,793
  66,218,895
  66,219,269
  66,219,278
  66,220,745
  66,222,938
  66,223,118
  66,223,759
  66,224,814
  66,225,292
  66,225,321
  66,226,643
  66,226,895
  66,228,321
  66,229,123
  66,233,409
  66,234,110
  66,234,788
  66,235,289
  66,235,475
  66,235,721
  66,237,607
  66,238,060
  66,239,241
  66,242,539
  66,242,756
  66,243,608
  66,243,866
  66,244,048
  66,244,711
  66,245,266
  66,245,927
  66,246,035
  66,246,410
  66,246,419
  66,246,437
  66,246,688
  66,246,690
  66,247,321
  66,247,337
  66,247,348
  66,247,395
  66,247,451
  66,247,567
  66,248,254
  66,248,263
  66,248,988
  66,249,417
  66,249,465
  66,249,466
  66,249,765
  66,250,633
  66,250,901
  66,251,073
  66,251,314
  66,252,073
  66,252,429
  66,254,149
  66,254,515
  66,254,562
  66,254,615
  66,254,631
  66,256,428
  66,256,637
  66,256,712
  66,256,761
  66,256,797
  66,256,833
  66,256,914
  66,257,339
  66,257,554
  66,257,721
  66,257,723
  66,258,053
  66,258,064
  66,258,735
  66,259,065
  66,259,109
  66,260,007
  66,260,223
  66,260,452
  66,260,616
  66,261,114
  66,261,119
  66,261,642
  66,261,733
  66,263,654
  66,263,814
  66,268,335
  66,276,398
  66,278,057
  66,278,773
  66,280,871
  66,289,684
  66,290,038
  66,290,291
  66,290,372
  66,290,715
  66,290,956
  66,293,652
  66,294,502
A
G/A
T
A
T
C
C
G
A
C
A
A
G
T
T
G
T
C
A
A
C
T
G
G
G
C
G
C
C
C
T
A
C
T
A
C
G
T
C
C
T
A
G
G
A
A
C
T
C
C
G
C
C
G
A
C
A
T
G
C
C
T
C
G
G
C
T
T
A
T
A
C
A
G
G
A
A
A
T
T
A
C
G
T
C
A
T
C
C
T
T
C
C
A
G
A
C
A
C
A
C
G
C
C
T
A
G
A
G
C