Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 95,774 (bp)   Positions: 166
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
WKY/NCrl (RGD) 
.002
.002
.0
.001
.03
.0
.001
.0
.05
.311
.001
.001
--
.005
.004
.0
.004
.0
.001
.007
.007
.017
.006
.669
.002
.031
.104
.001
.003
.319
.0
.006
.01
.002
.0
.0
.001
.0
.007
.079
.444
.0
.01
.002
.0
.001
.522
.106
.074
.046
.019
.0
.0
.001
.127
.043
.005
.001
.002
.0
.0
.0
.18
.0
.0
.004
.004
.094
.001
.001
.449
.526
.005
.0
.0
.003
.032
.001
.0
.0
.009
.001
.199
.03
.007
.007
.0
.01
.0
.012
.004
.0
.003
.004
.001
.0
.0
.007
.008
.0
1.0
.002
.015
.005
.001
.003
.002
.061
.035
.021
.027
.004
.0
.003
.299
.317
.336
.003
.0
.002
.0
.002
.001
.0
.002
.01
.019
.353
.001
.012
.138
.058
.015
.001
.0
.019
.242
.001
.007
.001
.0
.003
.026
.149
.255
.004
.009
.0
.021
.055
.127
.0
.072
.0
.0
.001
.08
.309
.721
1.0
.922
.979
.0
.992
.067
.033
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
Mmd
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
G
C
C
T
C
A
T
A
T
C
G
C
A
G
G
A
A
T
T
C
C
C
C
G
A
C
A
G
G
T
T
C
T
G
A
T
G
T
T
T
A
C
C
T
A
G
T
T
C
G
C
C
C
G
T
C
T
A
T
G
T
C
A
C
G
T
G
A
C
C
G
G
C
C
G
A
C
G
T
T
T
G
G
T
C
T
G
A
G
A
C
G
A
G
G
A
G
T
A
T
G
G
A
A
T
G
T
T
A
T
G
C
T
A
A
A
T
G
T
T
T
T
T
T
T
A
T
G
G
C
A
T
C
T
C
A
T
C
G
T
T
C
C
C
A
A
T
A
A
G
T
C
G
G
G
C
G
G
T
T
A
C
T
T
G
  77,691,183
  77,691,663
  77,693,989
  77,694,986
  77,695,074
  77,697,282
  77,697,885
  77,698,176
  77,700,704
  77,707,467
  77,708,360
  77,711,194
  77,711,254
  77,717,263
  77,718,053
  77,718,138
  77,718,160
  77,719,110
  77,721,158
  77,721,541
  77,721,754
  77,722,017
  77,725,996
  77,728,349
  77,730,067
  77,730,101
  77,730,131
  77,731,100
  77,732,266
  77,734,035
  77,735,924
  77,736,014
  77,736,185
  77,736,502
  77,737,074
  77,737,179
  77,737,369
  77,737,700
  77,737,731
  77,738,152
  77,738,331
  77,738,523
  77,738,556
  77,738,605
  77,738,999
  77,739,001
  77,739,337
  77,739,434
  77,739,461
  77,739,820
  77,739,971
  77,740,956
  77,741,112
  77,742,043
  77,742,418
  77,742,643
  77,742,749
  77,742,769
  77,743,586
  77,744,309
  77,744,547
  77,744,842
  77,745,110
  77,745,430
  77,745,721
  77,745,834
  77,747,090
  77,747,206
  77,747,964
  77,748,027
  77,749,344
  77,749,767
  77,750,807
  77,751,187
  77,751,190
  77,751,395
  77,751,480
  77,751,577
  77,752,164
  77,752,270
  77,752,737
  77,752,852
  77,753,473
  77,754,237
  77,754,254
  77,754,530
  77,755,998
  77,757,960
  77,758,463
  77,758,583
  77,760,118
  77,760,254
  77,760,857
  77,761,023
  77,761,111
  77,761,792
  77,762,332
  77,762,462
  77,763,012
  77,763,072
  77,763,160
  77,763,271
  77,763,496
  77,763,711
  77,763,813
  77,763,940
  77,764,084
  77,764,135
  77,764,342
  77,764,359
  77,764,397
  77,764,492
  77,765,435
  77,765,750
  77,767,289
  77,767,290
  77,767,291
  77,767,475
  77,768,103
  77,768,641
  77,770,123
  77,770,147
  77,770,252
  77,770,292
  77,770,294
  77,770,376
  77,770,568
  77,771,040
  77,771,084
  77,771,097
  77,771,346
  77,771,805
  77,772,025
  77,772,362
  77,772,915
  77,774,212
  77,774,367
  77,774,806
  77,775,113
  77,775,254
  77,775,273
  77,775,297
  77,775,943
  77,776,234
  77,777,009
  77,778,409
  77,778,844
  77,778,913
  77,779,440
  77,779,472
  77,780,056
  77,780,479
  77,780,557
  77,780,902
  77,781,634
  77,781,680
  77,781,707
  77,782,237
  77,782,269
  77,782,446
  77,782,828
  77,783,040
  77,783,120
  77,783,206
  77,783,492
  77,783,494
G
A
T
T
C
A
G
C
G
G
T
A
T
G
A
C
G
G
G
C
T
A
T
A
A
G
T
C
A
A
C
C
T
C
T
T
A
A
C
C
G
G
T
T
C
G
A
C
A
G
T
T
A
T
A
C
G
C
G
C
C
G
T
G
T
A
C
C
G
T
G
C
A
T
T
A
G
G
T
C
C
C
T
C
A
T
C
A
C
A
G
A
A
G
T
A
G
A
G
G
C
A
A
G
G
C
A
C
G
G
A
A
A
C
A/T
A/T
T
A
A
C
C
C
C
C
G
C
G
C
A
T
T
G
C
T
C
G
G
C
T
A
C
C
T
T
T
G
G
C
T
C
A
C
T
A
A
A
G
A
A
C
C
G
T
C
A
A