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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 99,062 (bp)   Positions: 525
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
HXB20/IpcvMcwi (2020) 
.011
.08
--
--
.173
.008
.023
.038
.004
.001
.0
.005
.003
.006
.053
.026
.005
.004
.019
.008
.012
.009
.006
.076
.047
.123
.132
.255
.092
.024
.014
.116
.019
.165
.0
.001
.005
.001
.0
.0
.0
.018
.035
.001
.001
.001
.002
.005
.006
.004
.07
.0
.014
.093
.0
.014
.0
.001
.001
.0
.0
.053
.0
.168
.0
.003
.002
.0
.001
.0
.0
.0
.0
.003
.0
.006
.002
.0
.016
.003
.001
--
--
--
--
--
--
--
--
--
--
--
--
.01
.003
.0
.001
.003
.003
.001
.023
.045
.046
.046
.015
.042
.133
.123
.099
.079
.02
.004
.011
.051
.176
.11
.064
.041
.056
.053
.062
.046
.028
.025
.086
.191
.359
.614
.641
.011
.085
.0
.012
.001
.0
.0
.128
.022
.017
.027
--
--
.004
.078
.107
.022
.007
.001
.01
.002
.007
.399
.117
.183
.016
.011
.079
.076
.062
.033
.035
.007
.013
.008
.004
.002
.04
.006
.089
.026
.024
.036
.019
.007
.006
.009
.013
.021
.005
.006
.01
.001
.008
.002
.012
.002
.001
.002
.035
.032
.041
.078
.116
.373
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.001
.005
.0
.005
.0
.004
.004
.002
.006
.018
.236
.224
.142
.016
.036
.008
.001
.001
.0
.01
.004
.005
.006
.003
.028
.018
.021
.0
.07
.061
.007
.02
.002
.001
.002
.005
.003
.019
.001
.015
.0
.001
.019
.056
.005
.005
.035
.001
.008
.011
.002
.068
.0
.018
.02
.001
.001
.019
.062
.007
.005
.479
.016
.003
.008
.1
.146
.025
.04
.081
.08
.006
.044
.051
.126
.018
.012
.038
.003
.0
.007
.0
.001
.016
.278
.114
.106
.181
.087
.079
.0
.0
.001
.002
.007
.003
.085
.043
.01
.001
.001
.0
.012
.002
.01
.007
.01
.0
.0
.001
.003
.012
.37
.349
.323
.324
.045
.042
.035
.025
.011
.002
.004
.002
--
--
.001
.089
.018
.018
.001
.001
.035
.013
.02
.001
.002
.061
.217
.252
.045
.001
.0
.0
.001
.013
.03
.011
.009
.001
.001
.003
.032
.001
.017
.007
.002
.003
.001
.0
.035
.607
.882
.001
.008
.535
.012
.005
.0
.042
.007
.22
.001
.002
.027
.065
.0
.002
.0
.001
.014
.014
.003
.017
.026
.004
--
.032
.111
.138
.153
.144
.004
.004
.005
.003
.0
.005
.001
.006
.024
.013
.009
.006
.008
.002
.007
.011
.0
.475
.017
.656
.018
.008
--
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--
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--
--
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
Mllt3
2
-
T
T
G
T
-
-
A
-
A
-
-
-
A
-
-
T
-
A
G
C
-
-
2
-
C
-
-
T
-
-
G
-
-
T
-
-
-
-
C
T
-
-
-
-
-
C
-
A
A
C
T
-
-
-
-
G
A
-
A
-
T
-
-
G
A
G
T
A
T
C
T
-
8
-
C
T
-
T
T
C
3
2
A
-
G
G
G
G
T
3
T
2
G
C
G
G
3
2
T
G
C
G
A
G
C
C
-
G
G
G
2
6
G
C
G
G
-
G
2
3
C
C
G
2
T
G
G
12
C
G
T
-
2
G
-
C
A
C
-
-
C
A
T
A
-
-
A
-
-
T
G
T
3
C
-
C
C
2
C
2
C
C
C
C
T
-
-
G
T
C
-
A
-
G
C
G
G
C
A
C
A
C
A
A
C
T
C
T
C
T
A
-
-
G
C
G
-
-
G
C
-
-
-
-
-
G
-
-
A
-
-
-
G
C
-
T
-
-
-
-
-
-
G
-
-
-
-
T
G
T
-
-
T
G
-
-
-
-
-
G
-
G
C
-
-
-
-
-
-
-
G
-
-
-
-
-
-
G
-
-
C
-
C
-
-
-
-
T
-
-
-
-
A
G
-
-
-
C
G
-
-
-
-
2
-
-
-
C
-
-
C
-
T
G
G
-
A
C
-
2
-
-
T
G
C
-
-
-
-
-
2
G
G
G
-
-
-
G
G
G
C
2
-
G
G
-
A
T
-
C
A
-
C
-
-
C
-
-
T
T
-
G
G
T
C
T
G
G
C
-
-
-
G
-
-
2
-
2
T
-
3
-
-
-
-
-
-
-
3
G
C
T
-
G
A
2
2
-
-
G
G
G
G
2
G
A
G
T
G
-
2
-
A
-
-
-
-
T
-
2
-
-
T
-
-
-
G
-
-
T
G
G
T
C
-
T
T
C
G
T
T
-
-
T
-
-
-
-
G
-
C
T
C
3
16
-
T
-
2
-
2
-
T
G
C
-
-
-
T
A
T
-
-
-
G
G
-
T
A
2
G
A
-
-
-
C
T
A
-
-
-
-
2
A
-
-
-
C
-
G
-
T
-
-
-
C
-
A
G
-
-
-
C
A
G
G
C
C
2
G
-
-
-
T
G
G
-
C
-
G
G
A
G
-
G
T
-
C
-
-
A
C
G
  106,118,148
  106,137,716
  106,138,939
  106,138,941
  106,141,773
  106,141,830
  106,141,836
  106,141,938
  106,141,944
  106,141,993
  106,141,999
  106,142,013
  106,142,024
  106,142,027
  106,142,056
  106,142,065
  106,142,071
  106,142,094
  106,142,145
  106,142,150
  106,142,152
  106,142,157
  106,142,165
  106,142,182
  106,142,200
  106,142,217
  106,142,219
  106,142,243
  106,142,261
  106,142,276
  106,142,335
  106,142,339
  106,142,375
  106,142,407
  106,142,418
  106,142,421
  106,142,444
  106,142,453
  106,142,464
  106,142,466
  106,142,467
  106,142,478
  106,142,487
  106,142,524
  106,142,556
  106,142,559
  106,142,563
  106,142,565
  106,142,570
  106,142,572
  106,142,585
  106,142,633
  106,142,662
  106,142,731
  106,142,755
  106,142,763
  106,142,770
  106,142,789
  106,142,790
  106,142,794
  106,142,845
  106,142,868
  106,142,889
  106,142,903
  106,142,956
  106,142,970
  106,143,002
  106,143,023
  106,143,024
  106,143,048
  106,143,049
  106,143,053
  106,143,056
  106,143,080
  106,143,085
  106,143,100
  106,143,113
  106,143,278
  106,143,329
  106,143,340
  106,146,944
  106,149,079
  106,150,438
  106,150,444
  106,150,461
  106,150,508
  106,150,536
  106,150,546
  106,150,591
  106,150,608
  106,150,612
  106,150,615
  106,150,628
  106,150,646
  106,150,654
  106,151,183
  106,151,191
  106,151,195
  106,151,198
  106,151,206
  106,151,216
  106,151,221
  106,151,222
  106,151,227
  106,151,247
  106,151,253
  106,151,276
  106,151,279
  106,151,285
  106,151,289
  106,151,297
  106,151,305
  106,151,312
  106,151,316
  106,151,327
  106,151,347
  106,151,350
  106,151,353
  106,151,370
  106,151,387
  106,151,395
  106,151,400
  106,151,404
  106,151,407
  106,151,415
  106,151,419
  106,151,422
  106,151,430
  106,151,441
  106,152,171
  106,152,192
  106,152,224
  106,152,268
  106,152,275
  106,152,298
  106,152,304
  106,152,318
  106,152,352
  106,152,357
  106,152,365
  106,152,934
  106,152,946
  106,152,962
  106,152,990
  106,153,014
  106,153,022
  106,153,026
  106,153,032
  106,153,111
  106,153,123
  106,153,188
  106,153,238
  106,153,260
  106,153,265
  106,153,303
  106,153,314
  106,153,326
  106,153,355
  106,153,385
  106,153,389
  106,153,402
  106,153,408
  106,153,419
  106,153,424
  106,153,429
  106,153,432
  106,153,446
  106,153,453
  106,153,703
  106,153,726
  106,153,731
  106,153,743
  106,153,762
  106,153,768
  106,153,771
  106,153,778
  106,153,793
  106,153,797
  106,153,805
  106,153,808
  106,153,812
  106,153,836
  106,153,839
  106,153,846
  106,153,850
  106,153,863
  106,153,870
  106,153,872
  106,153,888
  106,153,897
  106,153,898
  106,153,906
  106,153,916
  106,161,226
  106,164,896
  106,164,901
  106,164,921
  106,164,938
  106,164,942
  106,164,945
  106,164,949
  106,164,973
  106,165,001
  106,165,006
  106,165,034
  106,165,037
  106,165,040
  106,165,047
  106,165,067
  106,165,077
  106,165,081
  106,165,085
  106,165,088
  106,165,093
  106,165,100
  106,165,104
  106,165,108
  106,165,111
  106,165,117
  106,165,123
  106,165,128
  106,165,131
  106,165,134
  106,165,156
  106,165,161
  106,165,179
  106,165,186
  106,165,189
  106,165,190
  106,165,202
  106,165,207
  106,165,212
  106,165,221
  106,165,236
  106,165,238
  106,165,251
  106,165,258
  106,165,266
  106,165,279
  106,165,280
  106,165,288
  106,165,301
  106,165,308
  106,165,312
  106,165,313
  106,165,318
  106,165,328
  106,165,334
  106,165,336
  106,165,344
  106,165,370
  106,165,373
  106,165,377
  106,165,386
  106,165,395
  106,165,400
  106,165,409
  106,165,421
  106,165,597
  106,165,607
  106,165,652
  106,165,690
  106,165,696
  106,165,701
  106,165,704
  106,165,712
  106,165,714
  106,165,720
  106,165,732
  106,165,741
  106,165,765
  106,165,774
  106,165,780
  106,165,783
  106,165,791
  106,165,793
  106,165,800
  106,165,803
  106,165,809
  106,165,814
  106,165,817
  106,165,822
  106,165,823
  106,165,842
  106,165,863
  106,165,871
  106,165,885
  106,165,900
  106,165,902
  106,165,908
  106,165,912
  106,165,923
  106,165,926
  106,165,928
  106,165,945
  106,165,948
  106,165,950
  106,165,953
  106,165,957
  106,165,959
  106,165,962
  106,165,969
  106,166,020
  106,166,042
  106,166,053
  106,166,056
  106,166,081
  106,166,312
  106,166,595
  106,166,607
  106,166,620
  106,167,004
  106,167,227
  106,167,347
  106,167,391
  106,167,401
  106,167,408
  106,167,409
  106,167,423
  106,167,432
  106,167,443
  106,167,462
  106,167,463
  106,167,467
  106,167,479
  106,167,509
  106,167,516
  106,167,522
  106,167,527
  106,167,550
  106,167,560
  106,167,594
  106,167,605
  106,167,607
  106,167,617
  106,167,630
  106,167,634
  106,167,699
  106,167,712
  106,167,718
  106,167,732
  106,167,743
  106,167,750
  106,167,787
  106,167,790
  106,167,799
  106,167,800
  106,167,827
  106,167,853
  106,167,869
  106,167,894
  106,167,902
  106,167,910
  106,167,922
  106,167,944
  106,167,959
  106,167,960
  106,167,966
  106,167,984
  106,168,021
  106,168,027
  106,168,054
  106,168,066
  106,168,080
  106,168,096
  106,168,106
  106,168,128
  106,168,130
  106,168,158
  106,168,163
  106,168,170
  106,168,180
  106,168,197
  106,168,216
  106,168,298
  106,168,303
  106,168,322
  106,168,332
  106,168,343
  106,168,352
  106,168,370
  106,168,425
  106,168,429
  106,168,436
  106,168,448
  106,168,465
  106,168,480
  106,168,482
  106,168,490
  106,168,509
  106,168,516
  106,168,522
  106,168,861
  106,168,884
  106,168,896
  106,168,911
  106,168,917
  106,168,918
  106,168,935
  106,168,950
  106,168,963
  106,168,990
  106,169,002
  106,169,031
  106,169,039
  106,169,052
  106,169,067
  106,169,100
  106,169,118
  106,169,125
  106,169,154
  106,169,158
  106,169,180
  106,169,209
  106,169,213
  106,169,218
  106,169,239
  106,169,241
  106,169,274
  106,169,275
  106,169,291
  106,169,317
  106,169,328
  106,169,646
  106,169,650
  106,169,663
  106,169,669
  106,169,678
  106,169,680
  106,169,682
  106,169,685
  106,169,690
  106,169,694
  106,169,707
  106,169,709
  106,169,713
  106,169,719
  106,170,078
  106,170,092
  106,170,102
  106,170,116
  106,170,125
  106,170,126
  106,170,131
  106,170,155
  106,170,168
  106,170,203
  106,170,227
  106,170,254
  106,170,261
  106,170,273
  106,170,280
  106,170,294
  106,170,299
  106,170,306
  106,170,338
  106,170,359
  106,170,365
  106,170,383
  106,170,384
  106,170,386
  106,170,405
  106,170,420
  106,170,460
  106,177,851
  106,177,942
  106,177,945
  106,177,948
  106,177,949
  106,177,962
  106,177,990
  106,178,019
  106,179,028
  106,179,051
  106,179,092
  106,179,094
  106,179,127
  106,179,192
  106,179,214
  106,179,253
  106,179,262
  106,179,314
  106,179,340
  106,179,358
  106,179,365
  106,179,443
  106,179,468
  106,179,490
  106,179,535
  106,179,551
  106,179,553
  106,179,562
  106,179,588
  106,179,596
  106,179,641
  106,179,649
  106,179,692
  106,179,696
  106,179,704
  106,179,716
  106,179,729
  106,179,732
  106,183,414
  106,184,380
  106,184,387
  106,184,391
  106,184,402
  106,184,404
  106,184,409
  106,184,416
  106,184,421
  106,184,432
  106,184,435
  106,184,452
  106,184,453
  106,184,459
  106,184,482
  106,184,508
  106,184,518
  106,184,637
  106,184,676
  106,194,358
  106,198,325
  106,198,844
  106,198,846
2/-
3
G
A
-
C
A
C
-
G
-
C
2
G
-
C
T
-
2
G
-
-
G
C
-
2
-
G
T
-
2
T
T
G
2
A
A
A
T
C
A
-
G
C
G
C
C
T
T
C
-
-
-
2
G
T
A
A
G
T
-
G
A
C
G
-
-
T
G
T
A
T
C
C
-
2
-
-
T
G
-
A
-
-
-
T
-
-
-
-
A
-
G
-
-
-
A
-
-
-
A
-
T
-
-
-
-
-
G
-
T
-
-
-
-
-
-
-
G
-
-
-
-
-
-
-
-
-
-
-
-
-
-
A
-
-
C
-
C
-
C
A
-
-
-
-
C
G
-
T
A
C
T
G
-
-
2
-
-
-
G
-
-
-
-
-
-
T
C
-
-
-
C
T
A
C/T
-
-
-
-
-
G
-
-
-
G
-
-
-
-
G
G
-
2
A
-
-
-
C
C
-
-
2
T
C
C
C
-
G
A
C
2
C
A
C
A
A
-
C
A
A
A
A
C
-
A
A
C
A
-
C
-
G
C
A
-
C
2
G
A
2
-
A
C
A
T
A
T
C
A
A
2
-
A
2
A
A
G
C
-
A
C
-
2
A
A
A
C
A
-
C
C
2
C
C
A
C
A
C
-
C
A
2
T
C
-
A
A
A
-
C
A
A
A
A
T
C
C
T
A
T
-
A
A
-
-
-
A
C
C
A
A
-
-
-
-
C
T
C
-
-
T
G
-
T
-
-
C
-
A
A
-
G
C
-
2
A
-
C
A
-
-
T
-
-
C
T
-
T
-
G
A
C
G
A
C
C
-
G
-
-
2
-
G
2
G
C
C
G
2
-
-
-
G
A
-
-
-
-
A
C
-
A
-
-
-
A
C
-
-
-
A
-
T
-
2
G
2
C
-
G
-
T
A
A
A
A
T
-
C
A
-
-
-
-
-
C
C
C
A
-
G
-
2
C
G
G
C
2
5
-
A
-
G
T
-
-
C
-
C
-
3
-
C
-
-
-
T
2
T
-
-
-
C
T
C
-
A
T
C
C
-
A
G
A
A
T
-
G
-
2
T
G
T
-
C
T
C
C
-
C
T
A
-
C
C
A
-
T
C
-
A
G
A
-
-
-
-
-
-
-
-
T
C
T
-
-
T
A
-
A
-
-
G
A
T
A/T
-
T
-
A
-/T
A/-
T
A