Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 39,674 (bp)   Positions: 219
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
FHL/EurMcwi (MCW) 
.091
--
.277
.001
.02
.112
.0
.022
.171
.004
.0
.004
.001
.017
.117
--
--
--
.015
.09
.011
.031
.014
.01
.0
.001
.129
.319
.532
.017
.004
.158
--
--
.05
.004
.003
.005
.0
.019
.11
.007
.166
.14
.0
.015
.024
.0
.001
.001
.004
.005
.002
.006
.001
.0
.0
.023
.008
.002
.002
.023
.0
.001
.0
.327
.571
.032
.019
.073
.056
.011
.127
.946
.029
.001
.001
.026
.093
.029
.074
.101
.173
.173
.057
--
--
--
--
.083
.156
.142
.024
.014
.03
.018
.005
.223
.156
.02
.011
.017
--
--
--
--
--
--
--
--
--
.0
.043
.003
.08
.013
.014
.31
.019
.962
.001
.001
.001
.0
.002
.001
.001
.0
.003
.0
.001
.001
.002
.0
.0
.055
.0
.0
.001
.015
.019
.001
.007
.006
.125
.096
.003
.011
.006
.005
.02
.083
.62
.386
.001
.0
.0
.003
.01
.009
--
--
--
--
--
--
--
.003
.001
.0
.0
.0
.0
.561
.031
.015
.205
.143
.026
.608
.015
.006
.009
.218
.306
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.005
.002
.023
.067
--
.028
.265
.119
.025
.027
.082
.006
.099
.003
.002
.0
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
Mgat4d
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
C
C
G
C
A
G
G
A
T
C
C
T
T
G
A
T
G
A
T
T
A
A
T
A
T
T
A
C
T
C
C
A
A
A
G
G
C
A
C
G
A
C
A
G
A
T
G
G
C
C
G
A
G
A
C
T
G
T
G
G
G
C
G
G
C
T
C
G
C
T
A
T
A
C
C
A
G
T
G
A
G
A
C
A
A
G
C
T
T
A
G
G
G
G
G
G
G
T
C
G
G
T
A
G
A
A
G
A
G
G
G
T
C
C
A
G
G
A
T
C
T
T
A
A
G
T
T
A
G
A
A
G
A
A
A
A
C
G
A
C
A
A
A
T
G
C
G
A
G
G
C
T
A
T
A
C
A
A
A
C
T
C
A
G
A
T
A
A
G
A
C
A
C
A
C
A
C
G
A
A
T
C
T
C
G
G
G
T
G
A
T
G
T
A
T
T
G
G
T
C
G
A
A
C
C
A
T
A
A
G
A
T
G
C
G
G
C
A
  24,494,384
  24,495,091
  24,495,180
  24,495,238
  24,495,315
  24,495,357
  24,495,563
  24,495,728
  24,496,154
  24,496,547
  24,496,828
  24,497,002
  24,497,274
  24,497,320
  24,498,137
  24,498,256
  24,498,366
  24,498,663
  24,499,240
  24,499,329
  24,499,334
  24,499,366
  24,499,572
  24,499,585
  24,499,740
  24,499,802
  24,499,956
  24,499,974
  24,500,215
  24,500,280
  24,500,442
  24,500,787
  24,500,875
  24,500,943
  24,501,011
  24,501,080
  24,501,109
  24,501,125
  24,501,174
  24,501,405
  24,501,424
  24,501,656
  24,501,760
  24,501,763
  24,501,970
  24,502,281
  24,502,374
  24,502,440
  24,502,540
  24,502,914
  24,503,074
  24,504,752
  24,504,793
  24,504,949
  24,505,111
  24,505,232
  24,505,282
  24,505,314
  24,505,499
  24,505,659
  24,505,765
  24,505,838
  24,505,938
  24,505,951
  24,505,956
  24,506,373
  24,506,664
  24,506,876
  24,506,969
  24,507,088
  24,507,194
  24,507,320
  24,507,768
  24,508,151
  24,508,509
  24,508,570
  24,508,634
  24,508,806
  24,508,942
  24,509,008
  24,509,135
  24,509,143
  24,509,228
  24,509,230
  24,509,259
  24,509,324
  24,509,338
  24,509,359
  24,509,371
  24,509,418
  24,509,488
  24,509,489
  24,509,596
  24,509,613
  24,509,706
  24,509,757
  24,509,829
  24,509,900
  24,510,000
  24,510,120
  24,510,363
  24,510,526
  24,510,550
  24,510,591
  24,510,642
  24,510,647
  24,510,691
  24,510,781
  24,510,811
  24,510,814
  24,511,097
  24,511,170
  24,511,238
  24,511,386
  24,511,495
  24,511,774
  24,511,830
  24,511,869
  24,512,042
  24,512,091
  24,512,192
  24,512,266
  24,512,429
  24,512,452
  24,512,469
  24,512,547
  24,512,549
  24,512,670
  24,512,673
  24,512,699
  24,512,718
  24,512,721
  24,512,785
  24,512,814
  24,512,846
  24,512,996
  24,513,308
  24,513,533
  24,513,574
  24,514,256
  24,514,306
  24,514,437
  24,514,487
  24,514,515
  24,514,680
  24,514,691
  24,514,710
  24,514,779
  24,514,798
  24,514,801
  24,514,852
  24,514,902
  24,514,991
  24,515,011
  24,515,253
  24,515,619
  24,515,807
  24,515,853
  24,515,886
  24,516,168
  24,516,195
  24,516,206
  24,516,330
  24,516,391
  24,516,405
  24,516,446
  24,516,590
  24,516,816
  24,517,179
  24,517,214
  24,517,390
  24,517,556
  24,517,729
  24,518,858
  24,519,839
  24,520,157
  24,520,216
  24,520,549
  24,520,889
  24,521,214
  24,521,244
  24,521,286
  24,521,300
  24,521,433
  24,521,447
  24,521,716
  24,523,638
  24,523,770
  24,523,899
  24,523,901
  24,523,948
  24,524,092
  24,524,391
  24,525,040
  24,525,646
  24,525,814
  24,526,028
  24,526,223
  24,526,225
  24,526,857
  24,527,589
  24,527,846
  24,528,014
  24,528,307
  24,528,655
  24,528,707
  24,529,255
  24,529,710
  24,530,482
  24,530,518
  24,531,470
  24,531,578
  24,532,003
  24,532,010
  24,532,902
  24,533,066
  24,533,180
  24,533,184
  24,534,002
G
T
T
A
A
G
A
A
G
A
T
T
A
C
A
G
C
A
G
C
C
C
G
C
G
C
A
G
G
C
T
C/T
C
C
C
A
A
T
G
T
A
G
T
T
A
G
A
C
A
T
G
A
G
A
G
T
C
A
C
A
A
A
T
A
A
A
C
T
C
T
C
G
C
G
T
G
G
A
C
A
G
A
G
T
G
G
A
T
C
C
C
T
A
A
A
C
A
A
C
T
C
A
C
G
C
G
G
A
G
A
A
A
A
T
T
G
A
A
G
C
T
C
C
G
G
A
A
T/C
G
A
G
G
A
G
G
G
C
T
A
G
T
G
G
G
C
A
T
A
T
C
A
T
C
G
A
G
A
G
G
G
G
A
C/T
A/G
G/T
A/G
T/C
G
G
T
G
T
G
T
C
T
G
T
A
G
T
C
T
C
T
A
A
A
A
A
A/T
C
A
G
G
G
C
T
A
G
T
A
C
T
T
T
G
G
T
C
A
G
C
T
T
G/A
A
T
G