Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 105,703 (bp)   Positions: 180
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SR/JrHsd (RGD) 
.001
.001
.0
.0
.0
.001
.001
.0
.012
.0
.001
.076
.615
.793
.119
.0
.398
.019
.031
.028
.002
.005
.002
.094
.009
.001
.046
.024
.03
.083
.034
.015
.071
.007
.001
.0
.01
.001
.002
.011
.377
.0
.001
.003
.064
.008
.124
.001
.001
.053
.002
.002
.006
.093
.151
.774
.0
.001
.0
.001
.003
.005
.0
.913
.428
.004
1.0
.711
.806
.002
.027
.009
.006
.0
.005
.169
.0
.0
.002
.013
.001
.013
.026
.018
.62
.005
.001
.0
.267
.005
.002
.0
.0
.0
.006
.0
.0
.01
.006
.0
.016
.001
.102
.037
.001
.007
.002
.003
.01
.013
.032
.001
.073
.264
--
.032
.014
.013
.06
.045
.023
.018
.004
.262
.755
.001
.0
.019
.001
.032
.003
.002
.002
.008
.002
.433
.001
.0
.0
.0
.0
.0
.0
.013
.0
.0
.002
.003
.0
.0
.021
.098
.303
.002
.019
.001
.0
.004
.002
.002
.0
.013
.007
--
.006
.0
.88
.222
.001
.0
.011
.224
.001
.005
.107
.051
.0
.003
.054
.0
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
Mertk
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
T
A
G
G
T
G
A
T
C
T
T
C
G
G
T
T
T
T
T
G
C
C
A
G
C
C
G
C
T
G
C
T
A
T
T
C
A
A
A
A
A
G
G
G
T
G
A
T
A
G
C
G
G
A
A
A
T
A
C
A
G
C
T
C
C
T
T
T
G
T
G
T
G
C
T
G
C
G
A
A
A
G
T
T
A
C
G
T
G
A
A
A
G
T
G
G
A
G
T
G
G
T
A
C
C
C
G
G
T
G
A
C
G
G
A
G
T
G
C
T
C
C
T
C
A
C
A
G
T
G
A
C
C
G
T
T
A
T
A
T
G
A
T
G
C
C
T
C
A
T
G
C
C
T
T
A
G
G
C
C
T
T
G
C
A
G
C
T
C
G
C
A
C
C
T
A
A
C
G
  121,235,310
  121,235,387
  121,235,456
  121,235,464
  121,235,631
  121,235,767
  121,236,015
  121,236,036
  121,236,122
  121,236,183
  121,236,188
  121,236,324
  121,236,338
  121,236,355
  121,236,449
  121,236,506
  121,237,126
  121,237,157
  121,237,208
  121,237,209
  121,237,218
  121,237,511
  121,237,765
  121,237,891
  121,237,907
  121,239,708
  121,239,872
  121,241,173
  121,241,515
  121,241,752
  121,241,767
  121,243,484
  121,243,541
  121,243,876
  121,246,616
  121,252,125
  121,254,351
  121,255,025
  121,258,802
  121,259,102
  121,261,878
  121,270,315
  121,276,418
  121,276,748
  121,277,273
  121,279,259
  121,280,649
  121,280,668
  121,280,763
  121,280,815
  121,281,858
  121,282,338
  121,284,469
  121,285,735
  121,286,118
  121,286,120
  121,287,072
  121,287,597
  121,287,598
  121,288,315
  121,288,566
  121,290,662
  121,290,837
  121,291,187
  121,291,265
  121,292,214
  121,294,008
  121,296,095
  121,297,223
  121,300,788
  121,301,388
  121,302,895
  121,303,511
  121,304,651
  121,304,660
  121,304,752
  121,306,836
  121,307,811
  121,308,050
  121,308,247
  121,308,506
  121,308,590
  121,308,597
  121,308,635
  121,308,669
  121,308,695
  121,309,201
  121,309,300
  121,309,632
  121,309,726
  121,309,727
  121,309,730
  121,310,170
  121,310,329
  121,310,393
  121,311,255
  121,311,370
  121,311,459
  121,311,470
  121,311,575
  121,312,180
  121,312,232
  121,312,421
  121,312,432
  121,312,687
  121,312,709
  121,312,780
  121,312,791
  121,312,869
  121,312,888
  121,312,922
  121,313,161
  121,313,298
  121,313,353
  121,313,867
  121,314,070
  121,314,077
  121,314,078
  121,314,117
  121,314,122
  121,314,657
  121,314,659
  121,314,675
  121,314,693
  121,314,701
  121,314,813
  121,314,834
  121,315,423
  121,315,489
  121,315,638
  121,315,654
  121,315,752
  121,315,806
  121,315,820
  121,316,040
  121,316,213
  121,316,318
  121,316,372
  121,316,377
  121,316,564
  121,316,609
  121,316,663
  121,316,665
  121,316,764
  121,316,783
  121,316,843
  121,317,003
  121,317,024
  121,317,099
  121,317,528
  121,317,702
  121,317,948
  121,318,310
  121,318,434
  121,318,873
  121,319,094
  121,319,285
  121,319,489
  121,319,540
  121,319,584
  121,319,995
  121,322,014
  121,322,035
  121,326,533
  121,327,048
  121,328,116
  121,328,334
  121,328,895
  121,329,065
  121,329,780
  121,330,543
  121,330,889
  121,330,895
  121,331,138
  121,331,479
  121,331,872
  121,334,176
  121,334,919
  121,338,323
  121,338,474
T
C
G
A
A
C
C
G
A
T
C
A
T
A
A
A
A
C
A
A
T
G
A
G
T
T
G
A
T
C
T
T
C
G
C
G
A
T
G
G
G
T
A
A
A
A
A
T
C
T
T
A
A
A
G
G
C
G
G
G
G
A
T
C
A
T
C
C
C
A
C
A
G
A
T
G
A
T
A
G
G
G
A
C
C
G
A
A
C
A
G
G
G
A
C
C
A
G
A
C
A
A
C
G
T
T
A
A
A
C
A
G
T
A
A
G
T
C
A
A
A
A
A
C
T
G
T
C
A
C
C
C
T
A
A
G
C
T
C
T
C
A
G
C
A
T
T
C
T
G
C
A
T
T
C
C
G
C
T
T
T
C
C
A
T
C
T
T
G
G
A
T
T
T
T
C
G
G
T
A