Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 133,967 (bp)   Positions: 267
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
LEXF4/Stm (2020) 
.026
.846
.916
.98
.992
.042
.009
.003
.04
.066
.034
.056
.0
.0
.001
.09
1.0
.111
.994
.992
.09
.001
.037
.859
1.0
1.0
1.0
.976
.988
.997
.049
.972
.975
.994
.101
.358
.8
.251
.02
.01
.0
.01
.432
.0
.001
.909
.416
1.0
1.0
1.0
1.0
1.0
1.0
.0
.001
.001
.0
.002
.214
.62
.001
.002
.0
.007
.001
.003
.0
.001
.0
.028
.005
.003
.013
.319
.223
--
--
--
--
--
--
--
.147
.037
.026
.024
.026
.351
.085
.084
.068
.017
.04
.016
.003
.001
.002
.021
.006
.027
.045
.067
.107
.003
.01
.011
.003
.001
.0
.0
.001
.004
.003
.001
.0
.0
.068
.057
.009
.011
.022
.028
.01
.006
.002
.005
.002
.0
.01
.017
.006
.004
.002
.002
.005
.001
.009
.006
.006
.007
.016
.006
.002
.0
.003
.017
.111
.086
.049
.003
.009
.008
.039
.017
.015
.003
.02
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.064
.028
.022
.032
.029
--
--
--
--
.004
.0
.042
.001
.001
.0
.0
.012
.012
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.013
.125
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.128
.131
.146
.2
.41
.001
.0
.0
.002
.004
.004
.008
.926
.955
.947
.314
.068
.001
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
-
T
2
2
A
A
C
G
-
-
-
A
-
3
C
-
-
-
T
G
G
T
-
-
T
C
A
-
T
G
-
T
G
-
-
A
-
C
-
-
-
-
-
-
-
-
-
C
-
C
-
G
G
-
A
T
G
G
-
T
-
-
G
-
-
-
C
2
C
2
-
G
C
-
-
A
-
2
C
-
2
A
A
G
A
C
-
-
A
G
A
-
-
-
-
G
T
A
G
G
G
-
T
2
G
A
-
G
3
G
4
-
T
A
C
G
G
-
C
G
2
T
G
T
G
2
T
T
-
-
G
G
-
T
A
C
C
A
C
-
A
A
-
C
-
C
C
2
C
C
T
2
T
G
T
G
T
C
C
A
A
T
C
T
T
G
C
C
T
G
G
A
C
A
A
-
A
C
A
A
-
-
-
-
-
C
T
C
-
-
-
-
-
-
-
C
2
C
C
A
A
T
G
-
C
A
C
-
2
T
T
G
T
2
2
2
-
T
C
C
T
G
G
-
-
-
-
-
C
T
C
-
A
C
T
G
C
T
A
T
-
-
A
C
C
G
G
G
T
G
A
C
A
6
C
-
3
C
6
A
-
G
C
C
-
9
-
  128,218,042
  128,219,940
  128,219,944
  128,219,948
  128,219,952
  128,219,958
  128,219,959
  128,219,960
  128,219,963
  128,219,966
  128,219,968
  128,219,972
  128,219,976
  128,219,978
  128,219,983
  128,219,986
  128,219,995
  128,220,009
  128,220,016
  128,220,017
  128,220,053
  128,220,095
  128,220,127
  128,220,204
  128,220,357
  128,220,364
  128,220,372
  128,220,414
  128,220,443
  128,220,444
  128,220,510
  128,220,533
  128,220,556
  128,220,573
  128,220,583
  128,220,588
  128,220,603
  128,220,613
  128,220,659
  128,220,665
  128,220,686
  128,220,701
  128,220,712
  128,220,722
  128,220,725
  128,220,736
  128,220,751
  128,220,783
  128,220,797
  128,220,802
  128,220,813
  128,220,820
  128,220,831
  128,220,893
  128,220,896
  128,220,903
  128,220,912
  128,220,918
  128,220,922
  128,220,952
  128,220,975
  128,220,983
  128,220,989
  128,220,993
  128,221,015
  128,221,023
  128,221,041
  128,221,049
  128,221,052
  128,231,239
  128,231,243
  128,231,249
  128,231,256
  128,231,331
  128,231,443
  128,231,570
  128,231,656
  128,231,673
  128,231,677
  128,231,796
  128,231,811
  128,231,871
  128,231,991
  128,232,001
  128,232,003
  128,232,014
  128,232,022
  128,232,055
  128,232,119
  128,232,120
  128,232,130
  128,232,153
  128,232,162
  128,232,180
  128,232,192
  128,232,193
  128,232,199
  128,232,231
  128,232,235
  128,232,258
  128,232,265
  128,232,268
  128,232,289
  128,232,752
  128,232,755
  128,232,756
  128,232,759
  128,232,761
  128,232,765
  128,232,772
  128,232,781
  128,232,786
  128,232,789
  128,232,791
  128,232,795
  128,232,800
  128,232,810
  128,232,840
  128,232,850
  128,232,853
  128,232,855
  128,232,882
  128,232,886
  128,232,893
  128,232,906
  128,232,912
  128,232,915
  128,232,919
  128,232,922
  128,232,924
  128,232,928
  128,232,935
  128,232,945
  128,232,947
  128,232,950
  128,232,953
  128,232,969
  128,232,972
  128,232,973
  128,232,983
  128,232,987
  128,233,016
  128,233,024
  128,233,036
  128,233,039
  128,233,046
  128,233,075
  128,233,082
  128,233,093
  128,233,117
  128,233,120
  128,233,124
  128,233,158
  128,233,174
  128,233,176
  128,233,182
  128,233,185
  128,236,129
  128,236,134
  128,236,139
  128,236,142
  128,236,147
  128,236,149
  128,236,160
  128,236,508
  128,236,511
  128,236,514
  128,236,519
  128,236,523
  128,236,529
  128,236,533
  128,243,878
  128,243,881
  128,243,883
  128,243,890
  128,243,900
  128,243,962
  128,243,963
  128,243,970
  128,243,977
  128,255,085
  128,255,292
  128,255,311
  128,255,327
  128,255,347
  128,255,381
  128,255,382
  128,262,630
  128,269,067
  128,271,348
  128,274,292
  128,275,350
  128,275,375
  128,275,423
  128,275,437
  128,275,452
  128,275,460
  128,275,466
  128,275,478
  128,275,480
  128,275,501
  128,275,522
  128,275,539
  128,275,573
  128,275,577
  128,275,617
  128,275,669
  128,275,673
  128,275,688
  128,275,703
  128,275,710
  128,275,723
  128,275,725
  128,277,747
  128,277,789
  128,277,798
  128,277,808
  128,277,832
  128,277,907
  128,277,970
  128,278,082
  128,285,214
  128,285,238
  128,299,411
  128,299,424
  128,299,486
  128,299,502
  128,299,516
  128,299,589
  128,299,639
  128,299,640
  128,299,737
  128,299,759
  128,299,767
  128,308,970
  128,309,131
  128,309,149
  128,309,369
  128,309,466
  128,309,477
  128,309,539
  128,309,578
  128,309,723
  128,315,801
  128,316,271
  128,316,846
  128,317,595
  128,317,757
  128,318,029
  128,318,030
  128,318,037
  128,318,395
  128,318,402
  128,341,111
  128,341,118
  128,341,121
  128,341,125
  128,341,128
  128,341,130
  128,341,140
  128,341,145
  128,341,146
  128,341,148
  128,341,151
  128,341,154
  128,341,159
  128,341,170
C
-
-
-
C
C
A
T
2
T
G
T
G
-
T
10
T
C
C
A
-
-
T
A
-
-
-
T
G
T
2
-
-
C
C
-
A
-
C
A
A
T
T
A
A
A
A
-
2
A
C
-
A
T
-
-
-
-
A
-
2
T
C
A
T
2
-
-
C/G
-
G
C
-
A
G
-
G
-
A
G
-
-
-
A
-
-
A
C
-
C
-
G
A
T
T
T
-
-
C
-
-
C
G
-
T
T
TT/T
T
-
-
-
A
A
-
-
-
A
T
-
-
-
-
A
-
-
-
-
-
G
2
T
-
2
A
-
-
G
G
A
A
-
-
G
-
C
-
-
-
-
G
-
-
-
-
A
-
-
-
-
-
-
-
G
-
G
T
-
-
-
-
-
G
T
C
G
6
G
A
G
-
7
C
C
C
C
T
C
-
T
3
3
T
T
C
C
A
-
-
G
C
-
-
-
T
-
-
-
2
-
-
-
-
-
-
-
-
A
-
-
-
-
-
T
C
A
A
A
G
-
C
T
C
-
-
T/C
G/A
C/T
T/C
A/T
T/C
-/A
-/T
A/C
C/T
C/T
A
A
G/A
T/C
G/A
A/C
C/T
A/T
6/-
C/A
-/2
3/-
C/G
6/-
A/C
-/2
G/T
C/A
C/G
-/T
9/-
-/4