Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 134,610 (bp)   Positions: 134
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SBH/Ygl (MCW) 
1.0
1.0
.001
.062
.694
.001
.002
.056
.017
.003
.036
.458
.001
.0
.001
.013
.014
.021
.01
.425
.005
.005
.015
.007
.006
.016
.0
.002
.0
.273
.018
.0
.153
.01
.0
.189
.01
.003
--
--
.282
.002
.008
--
.891
.389
.0
.029
.005
.008
.065
.002
.001
.502
.537
.318
.033
.002
.027
.738
.019
.0
.013
.006
.093
.0
.014
.0
.014
.001
.009
.082
.033
.098
.0
.0
.003
.001
.001
.984
.03
.091
.013
.128
.03
.002
.008
.004
.038
.001
.038
.04
.014
.001
.003
.004
.12
.002
.002
.019
--
--
.024
.031
.095
.015
.009
.075
.044
.003
.008
--
.039
.049
.003
.011
--
--
.07
.142
.024
.023
.007
.01
.001
.0
.001
.001
.227
.191
.146
.044
.001
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Mark1
Mark1
Mark1
Mark1
Mark1
Mark1
Mark1
Mark1
Mark1
Mark1
Mark1
Mark1
Mark1
Mark1
T
C
G
G
G
T
G
A
G
C
C
C
A
T
T
T
T
C
C
G
T
C
A
C
A
A
G
C
G
T
A
C
A
T
A
A
G
A
A
A
A
C
T
T
C
C
A
T
T
A
C
C
C
G
C
A
T
C
A
T
C
C
A
C
T
G
T
G
C
G
G
A
A
C
T
G
C
G
A
T
T
T
A
T
T
G
A
C
C
A
G
T
T
C
T
G
G
T
G
A
C
T
A
G
T
T
T
C
C
G
T
G
G
G
C
G
C
A
A
G
C
G
C
C
C
C
C
C
G
C
G
G
T
T
  102,808,458
  102,808,481
  102,809,156
  102,810,484
  102,812,556
  102,814,683
  102,814,892
  102,815,115
  102,816,262
  102,816,277
  102,817,292
  102,817,517
  102,820,134
  102,820,233
  102,821,314
  102,821,624
  102,821,979
  102,822,083
  102,822,923
  102,825,325
  102,825,534
  102,826,226
  102,827,227
  102,827,488
  102,827,735
  102,827,744
  102,828,519
  102,828,748
  102,828,777
  102,830,081
  102,831,062
  102,832,471
  102,832,986
  102,832,996
  102,834,167
  102,834,196
  102,834,260
  102,834,279
  102,835,924
  102,835,927
  102,836,494
  102,837,121
  102,838,411
  102,839,663
  102,840,095
  102,840,099
  102,840,157
  102,840,426
  102,840,775
  102,841,111
  102,841,533
  102,842,029
  102,842,103
  102,842,459
  102,842,486
  102,842,520
  102,842,535
  102,842,541
  102,842,575
  102,843,454
  102,844,108
  102,844,515
  102,846,350
  102,847,647
  102,847,701
  102,848,889
  102,851,718
  102,851,935
  102,852,700
  102,853,936
  102,854,090
  102,854,383
  102,855,187
  102,856,414
  102,857,459
  102,857,460
  102,857,481
  102,857,744
  102,858,533
  102,858,944
  102,859,527
  102,861,625
  102,861,884
  102,862,400
  102,862,487
  102,862,721
  102,862,919
  102,863,510
  102,864,275
  102,864,439
  102,864,657
  102,865,322
  102,865,902
  102,866,220
  102,866,837
  102,866,856
  102,867,072
  102,867,341
  102,867,584
  102,868,788
  102,869,718
  102,870,192
  102,870,390
  102,870,759
  102,871,555
  102,872,139
  102,872,600
  102,872,830
  102,873,126
  102,873,664
  102,873,833
  102,876,069
  102,876,349
  102,876,365
  102,876,390
  102,876,409
  102,877,883
  102,878,440
  102,879,496
  102,879,685
  102,879,742
  102,879,883
  102,880,008
  102,880,509
  102,880,754
  102,880,813
  102,881,196
  102,881,290
  102,881,645
  102,882,562
  102,913,261
  102,913,265
  102,913,705
  102,942,850
C
T
A
A
T
C
C
G
A
T
T
G
G
C
C
C
C
T
A
A
C
T
T
T
A/T
T
A
G
A
A
T
T
G
G
T
G
T
G
A/T
A/T
C
T
C
A
C/T
C/T
G
C
C
G
T
T
T
T
C/T
A/G
T/C
C/T
G
G
T
T
G
A
G
A
A
A
T
A
A
G
G
T
C
A
T
A
C
C
G
C
C
T/C
A
A
T
T
T
G
A
C
G
T
C
A
A
A
A
G
T
C
G
A
C
C
G
T
G
A
C
A
C
A
T
A
T
G
G
T
T
C
T
T
A
T
G
G
T
G
G/A
G/A
G
G