Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 134,188 (bp)   Positions: 233
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
LE/Stm (RGD) 
.001
.055
.015
.0
.001
.0
.0
.0
.0
.0
.019
.0
.001
.0
.104
.014
.209
.03
.053
.003
.004
.005
.002
.0
.017
.003
.001
.982
.997
--
.986
.003
.0
.0
.0
.075
.0
.0
.0
.001
.003
.0
.004
.0
.002
.001
.0
.0
.0
.907
.0
.0
.001
.005
.003
.009
.0
.0
.078
.0
.0
.0
.001
.007
.035
.042
.108
--
.002
.081
.0
.0
.006
.0
.0
.001
.003
.0
.0
.0
.0
.0
.0
.714
--
.275
.105
.001
.011
.0
.001
.0
.0
.0
.0
.0
.0
.077
.176
.001
.003
.004
.002
.004
.004
.001
.0
.057
.0
.004
.0
.158
.034
.006
.002
.004
.011
.011
.009
.048
.001
.001
.002
.066
.02
.0
.003
.001
.002
.002
.008
.499
.004
.002
.255
.0
.001
.0
.006
.0
.003
.011
.001
.061
.061
.018
.627
.018
.09
.002
.073
.002
.002
.0
.005
.001
.0
.0
.036
.001
.0
.0
.0
.0
.002
.008
.001
.0
.002
.0
.0
.009
.03
--
.022
.0
.003
.005
.0
.022
.03
.005
.0
.395
.001
.001
.877
.939
.041
.007
.0
.003
.046
.003
.016
.013
--
--
--
.003
.043
.64
.024
.396
.364
.748
.142
.186
.001
.008
.011
.002
--
--
--
--
--
--
.026
.011
.082
.015
.001
.0
.002
.0
.017
.0
.005
.0
.0
.006
.002
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
Lrrk1
T
A
C
G
C
T
T
T
A
C
C
G
T
C
A
C
C
T
A
T
A
T
A
A
T
G
T
C
A
C
G
G
C
T
G
A
A
C
T
A
A
T
G
T
G
C
T
A
C
A
G
C
G
G
G
G
A
T
G
C
T
A
A
A
T
T
G
T
T
G
T
C
A
T
A
C
A
C
G
T
C
G
T
T
C
G
T
T
C
T
T
G
A
G
C
A
C
A
G
C
C
A
T
C
G
T
A
A
C
C
G
C
A
G
G
G
A
T
A
G
A
T
G
A
A
A
A
G
C
T
C
G
G
A
C
C
G
T
A
G
C
C
C
C
A
T
A
G
T
G
C
A
T
T
G
A
A
T
C
C
C
C
C
A
G
G
A
G
C
T
G
T
A
T
A
T
T
G
A
G
C
G
A
G
T
T
C
C
T
A
T
C
G
G
T
G
C
C
T
A
C
C
G
C
A
A
C
A
T
T
G
T
A
G
T
G
G
A
A
T
T
T
C
C
T
A
A
T
A
A
C
A
A
  127,167,067
  127,167,519
  127,167,520
  127,168,323
  127,168,517
  127,168,691
  127,170,094
  127,171,760
  127,171,776
  127,172,037
  127,172,078
  127,172,485
  127,172,702
  127,174,900
  127,175,189
  127,175,298
  127,175,313
  127,175,429
  127,175,436
  127,176,425
  127,176,541
  127,176,719
  127,176,722
  127,176,983
  127,177,068
  127,177,743
  127,177,846
  127,178,143
  127,178,151
  127,179,078
  127,179,658
  127,179,697
  127,180,484
  127,180,803
  127,181,586
  127,181,969
  127,182,576
  127,182,756
  127,183,754
  127,183,786
  127,184,854
  127,184,939
  127,185,362
  127,185,753
  127,185,852
  127,186,303
  127,186,376
  127,186,710
  127,186,743
  127,187,621
  127,188,698
  127,188,761
  127,189,783
  127,189,932
  127,190,778
  127,190,850
  127,190,853
  127,190,910
  127,190,987
  127,191,065
  127,191,920
  127,192,354
  127,192,477
  127,192,950
  127,193,415
  127,193,632
  127,194,453
  127,194,871
  127,195,829
  127,196,752
  127,197,270
  127,197,372
  127,198,049
  127,199,093
  127,199,178
  127,199,419
  127,200,497
  127,200,603
  127,201,106
  127,202,481
  127,203,050
  127,203,982
  127,204,942
  127,207,540
  127,207,650
  127,209,438
  127,209,557
  127,211,283
  127,212,599
  127,213,240
  127,213,615
  127,214,128
  127,214,135
  127,214,421
  127,214,661
  127,214,806
  127,214,846
  127,214,986
  127,215,004
  127,215,186
  127,215,319
  127,215,320
  127,215,350
  127,215,372
  127,215,378
  127,215,487
  127,215,584
  127,215,649
  127,215,980
  127,216,374
  127,217,655
  127,219,430
  127,219,479
  127,221,098
  127,221,500
  127,221,576
  127,221,577
  127,221,591
  127,221,705
  127,221,924
  127,222,102
  127,222,227
  127,222,238
  127,222,421
  127,222,439
  127,222,759
  127,223,015
  127,223,343
  127,223,472
  127,223,608
  127,223,769
  127,223,988
  127,224,072
  127,224,121
  127,224,383
  127,224,638
  127,224,660
  127,224,718
  127,224,896
  127,225,693
  127,226,097
  127,227,303
  127,227,542
  127,227,746
  127,228,009
  127,228,042
  127,228,299
  127,229,056
  127,229,116
  127,229,262
  127,229,415
  127,229,609
  127,230,398
  127,231,183
  127,231,247
  127,231,292
  127,231,391
  127,231,433
  127,231,561
  127,231,681
  127,231,785
  127,231,917
  127,231,946
  127,232,019
  127,232,388
  127,233,860
  127,235,225
  127,237,521
  127,237,955
  127,239,129
  127,239,148
  127,241,176
  127,241,599
  127,242,109
  127,243,637
  127,244,450
  127,244,683
  127,244,684
  127,245,394
  127,245,787
  127,246,129
  127,246,229
  127,246,235
  127,246,446
  127,246,491
  127,246,997
  127,247,362
  127,247,527
  127,247,932
  127,248,543
  127,249,977
  127,255,196
  127,256,947
  127,259,174
  127,265,221
  127,266,080
  127,266,729
  127,266,731
  127,266,736
  127,274,209
  127,274,378
  127,278,183
  127,280,803
  127,281,195
  127,281,555
  127,281,748
  127,283,274
  127,283,850
  127,283,955
  127,284,044
  127,284,168
  127,284,220
  127,284,726
  127,284,807
  127,284,858
  127,285,476
  127,285,554
  127,285,599
  127,285,695
  127,286,499
  127,286,691
  127,287,020
  127,287,531
  127,287,753
  127,288,095
  127,288,163
  127,288,217
  127,288,854
  127,289,497
  127,289,884
  127,292,140
  127,298,329
  127,298,334
C
T
T
A
G
C
C
C
G
A
A
A
C
G
T
G
T
A
G
C
G
C
C
C
A
A
C
T
G
T
A
C
T
C
A
G
G
T
C
G
G
C
A
C
A
T
C
G
G
G
A
T
A
A
A
T
G
C
T
T
C
G
G
G
G
C
A
C
G
A
G
T
G
C
G
G
G
A
C
C
T
A
G
G
A
C
C
C
T
C
C
A
G
A
T
G
T
G
T
T
T
G
C
T
A
C
T
C
T
T
T
T
G
A
C
A
G
C
G
A
G
G
A
G
G
T
G
A
T
G
A
A
A
G
T
T
C
C
G
A
T
T
T
A
G
C
T
C
C
A
T
G
C
C
A
G
G
C
T
T
T
T
T
G
T
A
G
A
T
C
A
C
G
G
G
G
G
A
G
T
T
T
C
A
C
C
G
A
C
C
G
A
A
A
C
C
T
A
A
G
T
T
A
T
G
G
T
T
C
C
A
C
G
A
C
A
T
T
G
C
C
C
T
T
C
C
T
C
G
C
T
G
G