Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 50,154 (bp)   Positions: 106
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
Buf/N (MCW) 
.0
.003
.007
.001
.003
.001
.0
.011
.007
.768
.687
.006
.012
.001
.004
.101
.003
.083
.002
.0
.002
.004
.0
.842
.0
.0
.0
--
.015
.002
.01
.0
.005
.012
.279
.122
.011
.018
.473
.002
.003
.005
.001
.002
.014
.011
.008
.002
.0
.727
.013
.026
.004
.068
.382
.001
.958
.999
.012
.001
.02
.001
.005
.001
.013
.02
.229
.0
.005
.0
.014
.0
.984
.004
.007
.0
.0
.0
.001
.001
.0
.01
.008
.009
.002
.0
.0
.0
.987
1.0
.002
.0
.0
.003
.001
.002
.003
.0
.999
.016
.069
.223
.061
.0
.0
.0
Lrig3
Lrig3
Lrig3
Lrig3
Lrig3
Lrig3
Lrig3
Lrig3
Lrig3
Lrig3
Lrig3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
T
A
A
A
T
T
T
T
C
A
T
A
A
G
T
T
C
C
G
A
T
C
G
C
T
T
G
C
T
G
C
A
T
G
C
G
A
G
T
C
A
T
G
C
T
A
A
G
C
C
C
T
T
G
G
C
G
C
C
G
T
G
G
A
A
C
T
T
C
C
A
G
C
A
A
G
C
T
A
G
A
A
C
G
A
G
T
C
C
C
A
A
G
C
G
T
T
T
G
A
G
G
G
A
T
  69,219,012
  69,224,014
  69,224,749
  69,229,504
  69,229,507
  69,229,549
  69,230,157
  69,230,163
  69,230,612
  69,231,538
  69,231,691
  69,231,701
  69,231,735
  69,232,306
  69,232,446
  69,232,996
  69,233,216
  69,233,568
  69,233,698
  69,233,939
  69,234,088
  69,234,179
  69,234,489
  69,234,940
  69,235,699
  69,235,740
  69,236,214
  69,236,797
  69,237,060
  69,237,159
  69,237,277
  69,237,428
  69,237,592
  69,237,856
  69,238,518
  69,238,560
  69,239,000
  69,239,028
  69,239,034
  69,239,067
  69,239,576
  69,240,343
  69,240,617
  69,241,558
  69,241,770
  69,241,826
  69,242,441
  69,242,561
  69,242,622
  69,242,945
  69,244,278
  69,244,518
  69,245,059
  69,245,149
  69,245,825
  69,245,878
  69,246,163
  69,246,215
  69,247,068
  69,247,511
  69,247,937
  69,247,975
  69,248,001
  69,248,103
  69,248,197
  69,248,622
  69,248,925
  69,248,962
  69,249,282
  69,249,293
  69,249,559
  69,250,128
  69,250,429
  69,251,802
  69,252,647
  69,252,938
  69,253,104
  69,253,693
  69,254,429
  69,254,460
  69,254,615
  69,254,790
  69,255,478
  69,255,615
  69,255,679
  69,256,303
  69,256,310
  69,256,329
  69,256,548
  69,256,584
  69,256,688
  69,256,916
  69,257,193
  69,257,229
  69,257,281
  69,257,283
  69,257,444
  69,257,536
  69,257,976
  69,258,262
  69,259,249
  69,259,527
  69,259,578
  69,260,419
  69,260,963
  69,261,191
A
C
C
C
G
G
T/G
C
C
C/G
G
C
G
G
C
T/C
C
A
A
A
G
C
T
A
T
C
C
G/A
T
C
T
T
G
G
A
T
A
G
A
C
C/T
G
C
A
T
A
G
A/G
T
T
T
T
C
G
C
A
G
A
T
T
A
C
C
A
G
C
T
C
C
T
T
G
T
T
G
C
T
T
C
G
A
G
T
A
A
G
A
C
A
T
T
G
G
T
T
C
C
C
C
A
C
T
G/C
A
C
C