Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 78,190 (bp)   Positions: 88
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
Buf/N (MCW) 
.178
.021
.991
.003
.001
.0
.001
.0
.0
.0
.008
.08
.035
.0
.0
.005
.002
.001
.022
.0
.008
.009
.0
.025
.031
.022
.0
.0
.006
.0
.0
.0
.0
.002
.003
.001
.006
.0
1.0
.999
.999
.0
.005
.008
.003
.007
.001
.005
.112
.003
.001
.274
.009
.157
.023
.005
.0
.001
.125
.005
.051
.011
.001
.001
1.0
.031
.003
.001
.003
.0
.002
.0
.0
.0
.761
.996
.956
.998
.595
.006
.001
.056
.001
.001
.0
.001
.0
.004
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Lmx1b
Lmx1b
Lmx1b
Lmx1b
Lmx1b
Lmx1b
Lmx1b
Lmx1b
Lmx1b
T
C
T
T
C
T
G
T
G
A
T
G
G
G
G
C
A
G
C
A
A
G
C
G
T
C
C
T
G
A
C
G
T
G
C
A
T
G
T
T
A
C
T
G
T
C
C
G
G
T
A
G
C
G
C
A
C
G
G
C
G
T
C
T
G
T
G
A
A
C
C
A
T
T
A
A
A
A
C
G
G
C
C
T
A
C
C
C
  12,608,887
  12,609,289
  12,609,730
  12,610,661
  12,611,638
  12,612,420
  12,612,707
  12,612,781
  12,612,912
  12,613,461
  12,616,323
  12,617,109
  12,617,311
  12,618,129
  12,619,286
  12,620,076
  12,620,164
  12,620,323
  12,620,391
  12,620,443
  12,620,724
  12,620,998
  12,621,243
  12,621,306
  12,622,299
  12,622,979
  12,623,714
  12,624,570
  12,624,898
  12,626,140
  12,627,130
  12,627,224
  12,627,341
  12,627,425
  12,628,946
  12,629,053
  12,629,219
  12,629,859
  12,630,143
  12,630,197
  12,630,745
  12,631,691
  12,632,267
  12,632,348
  12,632,470
  12,633,076
  12,633,864
  12,634,424
  12,634,743
  12,634,940
  12,635,033
  12,638,038
  12,639,388
  12,639,782
  12,641,732
  12,645,096
  12,645,145
  12,645,781
  12,647,104
  12,648,340
  12,651,877
  12,653,623
  12,656,183
  12,656,349
  12,657,619
  12,660,242
  12,660,349
  12,660,400
  12,663,540
  12,663,623
  12,663,709
  12,668,018
  12,669,605
  12,671,335
  12,672,954
  12,675,217
  12,676,455
  12,677,087
  12,677,455
  12,678,941
  12,680,651
  12,681,822
  12,681,969
  12,682,595
  12,682,958
  12,684,355
  12,684,845
  12,686,433
C
T
C
C
A
C
A
C
C
G
C
A
C
A
A
G
G
A
T
T
T
A
T
G/A
A
T
T
C
A
G
T
C
A
A
G
G
C
C
C
C
G
T
C
A
A
A
T
G/C
T
G
G
A
T
A
T
C
T
A
C
T
A
C
T
G
A
G
A
C
A/C
C/T
T
G
C
C
C
G
G
T
G
C
G/T
A
T
A
C
T
T
T