Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 47,967 (bp)   Positions: 125
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SBN/Ygl (RGD) 
.0
.0
.002
.014
.004
.005
.263
.994
.918
.002
.0
.0
.0
.106
.333
.663
.0
.522
.857
.129
.018
.005
.093
.003
.0
.001
.0
.007
.012
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.004
.0
.001
.011
.0
.0
.002
.003
.0
.0
.004
.001
.041
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.011
.012
.001
.0
.001
.0
.096
.002
--
--
--
--
.006
.086
.002
.015
.017
.012
.024
.042
.052
.005
.003
.023
.195
.006
.033
.031
.01
.393
.016
.001
.122
.002
.01
.011
.004
.006
.003
.002
.035
.002
.001
.0
.001
.001
.001
.001
.045
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
LOC108350139
LOC108350139
LOC108350139
LOC108350139
LOC108350139
LOC108350139
LOC108350139
LOC108350139
LOC108350139
LOC108350139
LOC108350139
LOC108350139
LOC108350139
T
C
T
G
A
A
G
C
G
G
T
G
G
G
A
A
G
G
G
T
C
A
T
G
A
G
T
T
C
T
G
T
A
A
A
G
T
T
G
T
G
A
C
T
G
A
A
G
C
C
T
A
A
T
G
G
A
C
T
T
C
T
C
G
C
A
C
A
C
C
T
A
A
G
A
A
A
T
C
C
T
C
C
C
G
G
A
C
G
G
T
T
T
A
C
A
A
G
T
G
G
C
C
G
A
T
G
T
G
A
G
C
T
A
T
A
T
G
A
A
A
G
G
A
T
  255,625,167
  255,625,304
  255,625,397
  255,625,898
  255,627,284
  255,628,349
  255,629,123
  255,630,250
  255,630,519
  255,630,624
  255,630,634
  255,630,642
  255,630,719
  255,630,955
  255,631,199
  255,631,209
  255,631,245
  255,631,416
  255,631,458
  255,631,602
  255,631,617
  255,631,641
  255,631,669
  255,632,160
  255,632,312
  255,632,348
  255,632,357
  255,632,396
  255,632,489
  255,632,675
  255,632,716
  255,632,737
  255,632,761
  255,632,814
  255,632,989
  255,633,028
  255,633,074
  255,633,809
  255,634,325
  255,634,408
  255,634,409
  255,635,476
  255,635,487
  255,637,911
  255,638,355
  255,638,442
  255,638,534
  255,639,129
  255,639,136
  255,639,255
  255,639,378
  255,639,544
  255,639,639
  255,639,813
  255,640,194
  255,640,517
  255,640,647
  255,640,648
  255,640,730
  255,640,977
  255,640,992
  255,641,054
  255,641,068
  255,641,136
  255,642,480
  255,642,512
  255,642,524
  255,642,873
  255,642,935
  255,643,480
  255,643,747
  255,645,181
  255,646,999
  255,647,048
  255,647,267
  255,647,402
  255,647,548
  255,648,137
  255,648,694
  255,648,707
  255,649,107
  255,649,443
  255,649,774
  255,650,290
  255,651,417
  255,651,502
  255,651,511
  255,651,574
  255,651,883
  255,651,927
  255,652,183
  255,652,250
  255,652,290
  255,652,332
  255,652,494
  255,660,151
  255,660,163
  255,661,599
  255,661,683
  255,661,992
  255,663,332
  255,663,621
  255,665,271
  255,665,489
  255,667,752
  255,667,815
  255,668,802
  255,669,187
  255,669,283
  255,670,274
  255,670,712
  255,671,123
  255,671,165
  255,671,184
  255,671,691
  255,671,707
  255,671,804
  255,671,867
  255,671,913
  255,672,028
  255,672,196
  255,672,244
  255,672,322
  255,672,324
  255,672,364
C
T
G
A
T
T
A
G
A
A
C
A
A
A
G
T
A
C
A
C
T
G
A
C
C
A
C
C
T
A
A
A
G
G
G
C
C
C
A
C
T
T
T
G
C
G
G
C
T
T
C
G
T
G
T
C
T
T
A
C
A
A
T
T
T
G
G
C
G
G
C
G
G
A
G
T
C
C
T
T
G
A
T
A
T
A
T
T
A
A
C
A
C
G
A
T
T
T
A
A
A
T
T
A
T
A
A
C
A
G
A
A
G
G
C
T
G
A
G
G
G
C
T
C
G