Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 156,050 (bp)   Positions: 243
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
LEXF3/Stm (2020) 
.0
.002
.051
.212
.014
.008
.005
.0
.636
.0
.953
--
.007
.008
.0
.004
.001
.076
.0
.002
--
--
--
--
--
--
--
--
--
--
--
.149
.14
.097
.014
.009
.009
.0
.007
.003
.043
.003
.002
.032
.002
.036
.0
.01
.001
.764
.993
.331
.016
.001
.053
.001
.016
.001
.001
--
--
--
.0
.0
.001
.024
.0
.011
.001
.002
.0
.003
.07
.076
.058
.005
.003
.073
.429
.001
.001
.014
.013
.029
.155
.636
.023
.902
.002
.339
.371
.001
.001
.583
.835
.003
.001
.001
.018
.068
.002
.006
.001
.073
.003
.0
.002
.0
.001
.009
.002
.005
.001
.0
.0
.99
.002
.369
.002
.0
.687
.001
.0
.155
.186
.127
.063
.013
.026
.02
.001
.002
.007
.005
.029
.01
.003
.005
.025
.006
.008
.003
.005
.005
.03
.009
.013
.005
.003
.039
.117
.081
.002
.008
.001
.015
.0
.007
.003
.008
.001
.002
.053
.069
.023
.017
.097
.068
.182
.0
.0
.019
.01
.082
.0
.0
.002
.001
.0
.002
.037
.009
.001
.003
.248
.114
.012
.0
.0
.001
.0
.003
.001
.001
.001
.001
.001
.044
.001
.002
--
--
.047
.36
.197
.06
.318
.32
.287
.338
.295
.076
.071
.054
.029
.02
.012
.017
.065
.111
.155
.183
.193
.145
.012
.073
.092
.002
.024
.036
.037
.018
.016
.034
.073
.18
.507
.011
.398
.001
.008
.003
.438
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
Klhl13
G
T
-
-
T
G
C
A
C
A
T
C
G
T
T
C
-
G
G
2
G
T
A
A
A
C
A
T
-
G
-
-
T
C
C
A
-
18
4
A
2
A
C
-
-
C
T
A
A
T
T
A
T
T
A
C
C
G
T
A
A
A
A
A
T
G
T
A
G
G
A
G
-
C
A
A
C
A
A
C
A
-
C
T
A
G
G
A
2
-
T
A
C
C
A
T
A
G
C
A
A
A
A
G
T
T
C
A
A
A
T
A
G
C
C
A
T
A
C
G
A
-
G
C
A
G
A
A
A
T
-
A
C
A
2
-
-
A
T
T
4
C
-
A
-
T
G
A
2
-
A
C
G
C
-
A
-
A
C
4
T
-
A
A
T
G
C
-
T
C
C
A
C
-
G
A
T
C
G
T
C
G
T
C
C
A
8
T
T
C
G
G
C
C
T
C
G
A
T
C
C
G
G
C
2
A
G
G
T
C
A
G
2
-
C
2
-
A
T
T
-
C
C
-
-
-
G
-
C
G
-
C
C
-
-
T
2
G
41
5
-
-
A
  121,585,885
  121,585,926
  121,586,247
  121,587,964
  121,588,002
  121,588,036
  121,588,531
  121,588,680
  121,589,340
  121,590,972
  121,591,356
  121,591,388
  121,591,840
  121,592,266
  121,593,149
  121,593,490
  121,593,706
  121,594,491
  121,595,065
  121,595,069
  121,595,357
  121,595,381
  121,595,466
  121,595,471
  121,595,472
  121,595,500
  121,601,260
  121,601,261
  121,601,276
  121,601,281
  121,601,323
  121,601,364
  121,601,373
  121,601,379
  121,601,799
  121,602,494
  121,603,004
  121,603,083
  121,603,103
  121,603,153
  121,603,400
  121,604,510
  121,605,322
  121,605,453
  121,605,544
  121,605,795
  121,606,067
  121,606,356
  121,606,800
  121,607,334
  121,607,828
  121,607,987
  121,609,032
  121,609,269
  121,609,900
  121,610,284
  121,610,517
  121,612,121
  121,614,690
  121,615,979
  121,616,194
  121,616,392
  121,616,896
  121,616,948
  121,616,985
  121,617,258
  121,617,899
  121,617,954
  121,617,992
  121,618,949
  121,619,457
  121,620,194
  121,621,024
  121,622,718
  121,622,824
  121,622,992
  121,623,721
  121,624,457
  121,625,187
  121,625,326
  121,625,578
  121,625,642
  121,625,838
  121,626,326
  121,626,622
  121,626,794
  121,627,350
  121,627,450
  121,627,704
  121,627,968
  121,628,067
  121,628,522
  121,629,698
  121,630,029
  121,630,081
  121,630,666
  121,630,667
  121,630,731
  121,630,904
  121,631,547
  121,631,893
  121,639,305
  121,639,996
  121,640,770
  121,643,528
  121,644,662
  121,645,767
  121,646,966
  121,648,129
  121,648,758
  121,648,884
  121,649,016
  121,649,237
  121,649,930
  121,650,699
  121,651,685
  121,654,141
  121,655,207
  121,656,451
  121,660,221
  121,662,456
  121,663,727
  121,666,668
  121,669,561
  121,669,574
  121,669,586
  121,669,597
  121,669,605
  121,669,611
  121,669,612
  121,669,626
  121,669,635
  121,669,645
  121,669,649
  121,669,657
  121,669,693
  121,669,699
  121,669,704
  121,669,713
  121,669,721
  121,669,727
  121,669,744
  121,669,771
  121,669,775
  121,669,817
  121,669,841
  121,669,846
  121,669,856
  121,669,864
  121,669,869
  121,669,897
  121,669,904
  121,671,249
  121,671,774
  121,672,566
  121,672,775
  121,673,196
  121,673,871
  121,674,122
  121,674,979
  121,676,765
  121,676,807
  121,678,671
  121,678,722
  121,678,908
  121,680,594
  121,680,927
  121,684,017
  121,684,595
  121,684,664
  121,684,896
  121,685,367
  121,685,543
  121,686,443
  121,686,587
  121,686,903
  121,688,279
  121,688,639
  121,688,876
  121,689,102
  121,689,223
  121,691,860
  121,693,227
  121,694,680
  121,694,845
  121,695,379
  121,695,425
  121,696,796
  121,697,135
  121,697,314
  121,697,395
  121,697,516
  121,697,859
  121,698,101
  121,698,451
  121,698,556
  121,698,561
  121,699,809
  121,701,506
  121,702,121
  121,711,485
  121,711,486
  121,713,880
  121,713,905
  121,713,923
  121,713,967
  121,713,988
  121,713,991
  121,713,999
  121,714,005
  121,714,034
  121,714,063
  121,714,067
  121,714,077
  121,714,082
  121,714,095
  121,714,099
  121,714,103
  121,714,109
  121,714,115
  121,714,122
  121,714,127
  121,714,129
  121,714,141
  121,714,151
  121,714,163
  121,714,182
  121,714,280
  121,714,294
  121,714,300
  121,714,304
  121,714,310
  121,714,312
  121,714,333
  121,714,336
  121,714,364
  121,714,375
  121,718,307
  121,728,011
  121,728,135
  121,728,145
  121,728,147
  121,734,672
T
A
A
T
C
A
A
T
A
T
G
T
A
C
C
G
61
A
A
-
C
A
C
C
C
T
G
A
C
-
3
A
-
-
T
C
G
-
-
T
-
G
T
4
2
G
C
G
C
C
A
C
A
C
G
T
T
A
G
G
G
T
G
G
G
A
G
-
A
A
G
A
2
T
G
G
T
T
T
T
G
4
T
C
G
C
A
G
-
T
C
-
T
A
G
C
T
A
A
G
-
T
G
T
G
C
T
G
C
G
A
G
C
A
A
-
C
T
T
T
T
-/A
A
-
-
C
-
-
T
A
C
-
-
-
-
G
G
-
-
-
-
-
C
-
A
-
-
-
-
T
C
T
A
T
2
G
T
T
T
-
C
2
G
G
C
A
T
A
A
G
T
G
G
5
A
G
C
T
A
C
T
T
C
T
T
G
-
C
C
A
A
A
A
G
C
T
A
-
C
T
T
A
-
-
-
-
-
-
G
-
C
-
-
C
-
-
3
-
-
-
T
-
A
T
G
G
-
T
-
-
T
-
-
T
2
-
-
T
-
-
T
T
G